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Gene: Fbrsl1 (fibrosin like 1) Heterocephalus glaber

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Symbol:

Fbrsl1

Name:

fibrosin like 1

RGD ID:

18907054

Description:

ASSOCIATED WITH atrial fibrillation (ortholog); colorectal cancer (ortholog); Familial Prostate Cancer (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

fibrosin-1-like protein

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FBRSL1 (fibrosin like 1)	NCBI	Ortholog
Mus musculus (house mouse):	Fbrsl1 (fibrosin-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Fbrsl1 (fibrosin-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fbrsl1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FBRSL1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FBRSL1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fbrsl1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FBRSL1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FBRSL1 (fibrosin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624747	27,941,035 - 27,957,754 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fbrsl1	Naked Mole-Rat	colorectal cancer		ISO	RGD:2303695	8554872	ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12	ClinVar	PMID:28492532
Fbrsl1	Naked Mole-Rat	Neurodevelopmental Disorders		ISO	RGD:2303695	8554872	ClinVar Annotator: match by term: FBRSL1-associated neurodevelopmental syndrome	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fbrsl1	Naked Mole-Rat	atrial fibrillation		ISO	RGD:2303695	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29892015\|PMID:30061737
Fbrsl1	Naked Mole-Rat	Familial Prostate Cancer		ISO	RGD:2303695	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29892016

Fbrsl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624747	27,941,035 - 27,957,754 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

FBRSL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	132,490,151 - 132,585,188 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	132,489,551 - 132,585,188 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	133,066,737 - 133,161,774 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	131,577,230 - 131,671,848 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	132,766,852 - 132,861,533 (+)	NCBI		Celera
Cytogenetic Map	12	q24.33	NCBI
HuRef	12	129,865,151 - 129,940,322 (+)	NCBI		HuRef
CHM1_1	12	132,887,136 - 132,981,443 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	132,540,214 - 132,635,194 (+)	NCBI		T2T-CHM13v2.0

Fbrsl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	110,509,617 - 110,596,369 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	110,509,620 - 110,596,468 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	110,361,751 - 110,448,503 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	110,361,754 - 110,448,602 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	110,790,770 - 110,877,522 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	110,603,089 - 110,627,398 (-)	NCBI		MGSCv36	mm8
Celera	5	107,486,891 - 107,576,970 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	53.51	NCBI

Fbrsl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	51,891,211 - 51,979,715 (+)	NCBI		GRCr8
mRatBN7.2	12	46,231,466 - 46,320,607 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	46,231,495 - 46,320,357 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	12	52,289,979 - 52,378,726 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	52,356,832 - 52,377,475 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	54,025,360 - 54,114,099 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	46,376,650 - 46,465,402 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	12	47,788,025 - 47,876,348 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

Fbrsl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955482	442,043 - 501,579 (-)	NCBI	ChiLan1.0	ChiLan1.0

FBRSL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	140,596,207 - 140,694,850 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	140,592,788 - 140,691,367 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	129,837,013 - 129,936,801 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	134,578,858 - 134,655,245 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

FBRSL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	535,522 - 613,134 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	531,248 - 613,183 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	575,846 - 654,034 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	592,645 - 670,821 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	590,971 - 671,370 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	531,581 - 609,793 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	620,846 - 698,504 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	551,598 - 629,301 (-)	NCBI		UU_Cfam_GSD_1.0

Fbrsl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	122,175,559 - 122,237,406 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936660	2,483,674 - 2,545,518 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FBRSL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	22,887,227 - 22,977,450 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	22,890,052 - 22,977,364 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	24,271,820 - 24,358,390 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FBRSL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	127,840,826 - 127,936,739 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	116,933,585 - 117,031,103 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_021257725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01027240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AHKG01027241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_021257725 ⟹ XP_021113384

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624747	27,941,035 - 27,957,754 (+)	NCBI


Protein RefSeqs	XP_021113384	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_021113384 ⟸ XM_021257725
- UniProtKB:	A0AAX6SY77 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
InterPro	AUTS2	UniProtKB/TrEMBL
NCBI Gene	Fbrsl1	ENTREZGENE
PANTHER	FIBROSIN FAMILY MEMBER	UniProtKB/TrEMBL
	FIBROSIN-1-LIKE PROTEIN	UniProtKB/TrEMBL
UniProt	A0AAX6SY77	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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