Adamts14 (ADAM metallopeptidase with thrombospondin type 1 motif 14) - Rat Genome Database

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Gene: Adamts14 (ADAM metallopeptidase with thrombospondin type 1 motif 14) Heterocephalus glaber
Analyze
Symbol: Adamts14
Name: ADAM metallopeptidase with thrombospondin type 1 motif 14
RGD ID: 18900046
Description: ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); osteoarthritis (ortholog); primary progressive multiple sclerosis (ortholog); FOUND IN extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: A disintegrin and metalloproteinase with thrombospondin motifs 14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247544,724,591 - 4,795,127 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247544,724,633 - 4,805,672 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Adamts14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247544,724,591 - 4,795,127 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247544,724,633 - 4,805,672 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ADAMTS14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381070,672,506 - 70,762,441 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1070,672,506 - 70,762,441 (+)EnsemblGRCh38hg38GRCh38
GRCh371072,432,262 - 72,522,197 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361072,102,565 - 72,192,203 (+)NCBINCBI36Build 36hg18NCBI36
Build 341072,102,564 - 72,190,664NCBI
Celera1065,714,785 - 65,804,152 (+)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1066,426,030 - 66,515,714 (+)NCBIHuRef
CHM1_11072,714,821 - 72,804,912 (+)NCBICHM1_1
T2T-CHM13v2.01071,542,163 - 71,632,194 (+)NCBIT2T-CHM13v2.0
Adamts14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391061,032,886 - 61,109,447 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1061,032,891 - 61,109,217 (-)EnsemblGRCm39 Ensembl
GRCm381061,197,112 - 61,273,419 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1061,197,112 - 61,273,438 (-)EnsemblGRCm38mm10GRCm38
MGSCv371060,659,860 - 60,736,186 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361060,592,469 - 60,668,795 (-)NCBIMGSCv36mm8
Celera1062,298,060 - 62,374,540 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.16NCBI
Adamts14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82029,685,876 - 29,762,685 (-)NCBIGRCr8
mRatBN7.22029,143,029 - 29,219,846 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2029,144,354 - 29,219,866 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2030,159,025 - 30,235,831 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02029,545,330 - 29,622,130 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02030,287,790 - 30,364,590 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02030,812,319 - 30,888,936 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2030,812,353 - 30,888,751 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02032,601,731 - 32,679,935 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42028,555,684 - 28,631,824 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12028,569,485 - 28,644,150 (-)NCBI
Celera2030,577,661 - 30,652,835 (-)NCBICelera
Cytogenetic Map20q11NCBI
Adamts14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543720,593,739 - 20,664,075 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543720,592,278 - 20,664,075 (-)NCBIChiLan1.0ChiLan1.0
ADAMTS14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2882,825,453 - 82,913,006 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11082,830,784 - 82,918,318 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01067,145,400 - 67,232,934 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11069,671,222 - 69,758,229 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1069,671,222 - 69,758,229 (+)Ensemblpanpan1.1panPan2
ADAMTS14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1421,534,309 - 21,612,528 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl421,534,006 - 21,611,987 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha421,666,773 - 21,744,617 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0421,808,447 - 21,887,057 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl421,808,110 - 21,886,516 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1421,705,614 - 21,784,173 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0421,911,885 - 21,989,520 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0422,263,803 - 22,341,640 (+)NCBIUU_Cfam_GSD_1.0
Adamts14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721359,458,241 - 59,532,953 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365217,952,365 - 8,025,614 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365217,951,176 - 8,025,666 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADAMTS14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1473,538,090 - 73,653,560 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11473,565,158 - 73,657,257 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21479,385,991 - 79,503,129 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADAMTS14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1960,538,718 - 60,625,903 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl960,540,303 - 60,625,570 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604821,263,324 - 21,350,304 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000017685   ⟹   ENSHGLP00000017510
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247544,724,591 - 4,795,127 (+)Ensembl
RefSeq Acc Id: XM_004846214   ⟹   XP_004846271
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,637 - 4,805,672 (+)NCBI
RefSeq Acc Id: XM_013072912   ⟹   XP_012928366
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,637 - 4,805,672 (+)NCBI
RefSeq Acc Id: XM_021259557   ⟹   XP_021115216
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,637 - 4,796,645 (+)NCBI
RefSeq Acc Id: XM_021259558   ⟹   XP_021115217
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,636 - 4,805,672 (+)NCBI
RefSeq Acc Id: XM_021259559   ⟹   XP_021115218
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,726,798 - 4,796,645 (+)NCBI
RefSeq Acc Id: XM_021259560   ⟹   XP_021115219
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,752,940 - 4,796,645 (+)NCBI
RefSeq Acc Id: XM_021259561   ⟹   XP_021115220
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,633 - 4,789,511 (+)NCBI
RefSeq Acc Id: XM_021259562   ⟹   XP_021115221
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,633 - 4,789,511 (+)NCBI
RefSeq Acc Id: XR_002395590
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247544,724,633 - 4,794,840 (+)NCBI
RefSeq Acc Id: XP_021115220   ⟸   XM_021259561
- Peptide Label: isoform X7
RefSeq Acc Id: XP_021115221   ⟸   XM_021259562
- Peptide Label: isoform X8
RefSeq Acc Id: XP_021115217   ⟸   XM_021259558
- Peptide Label: isoform X4
RefSeq Acc Id: XP_012928366   ⟸   XM_013072912
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004846271   ⟸   XM_004846214
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021115216   ⟸   XM_021259557
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021115218   ⟸   XM_021259559
- Peptide Label: isoform X5
RefSeq Acc Id: XP_021115219   ⟸   XM_021259560
- Peptide Label: isoform X6
Ensembl Acc Id: ENSHGLP00000017510   ⟸   ENSHGLT00000017685


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012535 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000017685 ENTREZGENE
NCBI Gene Adamts14 ENTREZGENE