WDR13 (WD repeat domain 13) - Rat Genome Database

Name: WDR13
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: WDR13 (WD repeat domain 13) Chlorocebus sabaeus

Analyze

Symbol:

WDR13

Name:

WD repeat domain 13

RGD ID:

18771614

Description:

ENCODES a protein that exhibits promoter-specific chromatin binding (inferred); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation type IIm (ortholog); esophageal atresia (ortholog); FOUND IN centriolar satellite (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

WD repeat-containing protein 13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WDR13 (WD repeat domain 13)	NCBI	Ortholog
Mus musculus (house mouse):	Wdr13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Wdr13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wdr13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WDR13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WDR13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wdr13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WDR13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wdr13 (WD repeat domain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	45,721,318 - 45,729,152 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	45,721,406 - 45,733,103 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,198,138 - 11,205,800 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

congenital disorder of glycosylation type IIm (ISO)

esophageal atresia (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Thrombocytopenia 1 (ISO)

Wiskott-Aldrich syndrome (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of type B pancreatic cell proliferation (IEA,ISO)

Cellular Component

centriolar satellite (IEA)

nucleoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

Molecular Function

promoter-specific chromatin binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

WDR13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	45,721,318 - 45,729,152 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	45,721,406 - 45,733,103 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,198,138 - 11,205,800 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

WDR13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	48,597,492 - 48,608,869 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	48,590,042 - 48,608,869 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	48,455,880 - 48,467,257 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	48,340,845 - 48,348,518 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	48,212,154 - 48,219,828	NCBI
Celera	X	53,202,158 - 53,209,859 (-)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	46,119,373 - 46,127,116 (+)	NCBI		HuRef
CHM1_1	X	48,487,115 - 48,494,815 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	48,006,491 - 48,017,871 (+)	NCBI		T2T-CHM13v2.0

Wdr13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	7,989,540 - 7,999,134 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	7,989,540 - 7,999,131 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	8,123,301 - 8,132,858 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	8,123,301 - 8,132,892 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	7,700,427 - 7,709,984 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	7,280,293 - 7,289,397 (-)	NCBI		MGSCv36	mm8
Celera	X	3,336,407 - 3,345,965 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	3.67	NCBI

Wdr13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	17,034,779 - 17,045,682 (+)	NCBI		GRCr8
mRatBN7.2	X	14,362,484 - 14,373,727 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,362,860 - 14,373,727 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,176,180 - 19,187,046 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,896,034 - 20,906,900 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	17,161,225 - 17,172,091 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,112,663 - 15,123,825 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,113,878 - 15,122,146 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	15,895,830 - 15,906,986 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,394,400 - 26,402,277 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	14,448,830 - 14,456,706 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

Wdr13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955543	182,279 - 190,435 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955543	182,279 - 190,435 (+)	NCBI	ChiLan1.0	ChiLan1.0

WDR13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	50,086,391 - 50,097,783 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	50,089,763 - 50,101,155 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	40,895,793 - 40,907,183 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	48,750,502 - 48,765,111 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	48,757,416 - 48,765,111 (+)	Ensembl	panpan1.1		panPan2

WDR13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	41,818,916 - 41,825,815 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	41,818,950 - 41,825,811 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,195,277 - 16,202,190 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	50,252,408 - 50,259,324 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	50,252,412 - 50,259,276 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	41,941,934 - 41,948,847 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	41,930,304 - 41,937,200 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	42,024,053 - 42,030,968 (+)	NCBI		UU_Cfam_GSD_1.0

Wdr13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	34,326,121 - 34,353,854 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936721	566,520 - 574,934 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936721	566,529 - 594,203 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WDR13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	42,722,730 - 42,730,199 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	42,715,097 - 42,730,200 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	47,610,683 - 47,614,916 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Wdr13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	422,872 - 431,515 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	422,964 - 434,475 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007991596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007991597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007991598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007991599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037992944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037992945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000011326 ⟹ ENSCSAP00000009404

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	X	45,721,406 - 45,733,103 (+)	Ensembl

RefSeq Acc Id:

XM_007991596 ⟹ XP_007989787

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	X	45,721,318 - 45,729,152 (+)	NCBI
Vero_WHO_p1.0	NW_023666076	11,198,142 - 11,205,800 (+)	NCBI

Sequence:

show sequence

TAGACACTATCCTTCTATATACAAAAAGTGCCATTAACGAGTGGGTAGAACTCGAGGGGTGGAG
CCTCCGTCCTTGGGCCTGAAGCGAATGTCCCTCAATGCGCCTGCGAGACTCCCACGCCCTGGGA
AGGATGTCTATCGATTCGCTCTGGGCTCGGCAGCTCTTTCTGATAGCAGGCGGCCATCTTGCTT
GGAGCCTGAGAAAGGGAGGAGAGACAGAAGGAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGG
GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGTGGTTCCCGATCCCGGGCTATGCTCTTGGACCT
GAGAAGGCTCCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGC
AAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGAC
GCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCCCAGCG
CTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAGCTGCTGGGCCAGCGCTACGGACCCCTCTCTG
AGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACCCTTGACCG
CATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGC
CGAGGCTCCTACCAGCTGCAGGCACAGATGAACCGTGCTGTCTATGAGGACAGGCCCCCTGGCA
GCGTGGTGCCCACGTCAGCGGCAGAGGCAAGTCGGGCCATGGCCGGGGACACATCACTGAGCGA
GAACTATGCCTTTGCGGGCATGTACCATGTTTTTGACCAGCACGTGGATGAGGCAGTCCCAAGG
GTGCGCTTCGCGAATGATGACCGGCACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCC
TGTGCCAGCTGGTGCCCGCCCCACCCACAGTGCTTCGTGTGCTACGGGGCCACACCCGTGGTGT
CTCTGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATG
CGCATCTGGGCCTCTGAGGATGGCCGCTGCATCCGGGAGATCCCTGACCCTGATGGCGCTGAAC
TGCTCTGCTGCACCTTCCAGCCCGTCAACAACAACCTCACCGTGGTGGGGAACGCCAAGCACAA
CGTGCATGTCATGAACATCTCCACGGGCAAGAAAGTGAAGGGGGGCTCCAGCAAGCTGACGGGC
CGTGTCCTTGCTCTGTCCTTTGATGCCCCTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCA
GTGTCTTCTCTTTCCTCTTCGACATGGCCACGGGGAAGCTGACCAAAGCCAAGCGTCTGGTGGT
GCATGAGGGGAGCCCTGTGACCAGCATCTCAGCCCGGTCCTGGGTCAGCCGCGAGGCCCGGGAT
CCCTCACTGCTCATCAATGCTTGCCTCAACAAGCTGCTGCTCTACAGGGTGGTAGACAACGAGG
GGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTT
CTGTCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCGTG
CACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCCGTCAACAAGCTGCAGGGCCACAGTGCAC
CTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCAT
GGTCATCGTCTGGAGGCGGGAGCAGAAGTAGGGTCCTGTCAGCCCTGCTGCTGTCCTCCATCCC
ACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCGTGCTGAGGGCCAGCTCC
CAACTCTGCCAGGGACGGGCAGGGCAGCGGGCAGCTCCAGAAACACGGTGGAACGGG

hide sequence

RefSeq Acc Id:

XM_007991597 ⟹ XP_007989788

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	X	45,721,318 - 45,729,152 (+)	NCBI
Vero_WHO_p1.0	NW_023666076	11,198,140 - 11,205,800 (+)	NCBI

Sequence:

show sequence

TAGACACTATCCTTCTATATACAAAAAGTGCCATTAACGAGTGGGTAGAACTCGAGGGGTGGAG
CCTCCGTCCTTGGGCCTGAAGCGAATGTCCCTCAATGCGCCTGCGAGACTCCCACGCCCTGGGA
AGGATGTCTATCGATTCGCTCTGGGCTCGGCAGCTCTTTCTGATAGCAGGCGGCCATCTTGCTT
GGAGCCTGAGAAAGGGAGGAGAGACAGAAGGAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGG
GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGCTCCCGCGGGCGGACACGCCAGAGGAGGAGGCC
GGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCAC
ACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAAT
GCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAGCTGCTGG
GCCAGCGCTACGGACCCCTCTCTGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCG
CAGTAGCCGCACTACCCTTGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCC
CGTGGGCACCGTCGTTCTGTCAGCCGAGGCTCCTACCAGCTGCAGGCACAGATGAACCGTGCTG
TCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCGGCAGAGGCAAGTCGGGCCAT
GGCCGGGGACACATCACTGAGCGAGAACTATGCCTTTGCGGGCATGTACCATGTTTTTGACCAG
CACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCGAATGATGACCGGCACCGCCTGGCCTGCT
GCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCCGCCCCACCCACAGTGCTTCGTGT
GCTACGGGGCCACACCCGTGGTGTCTCTGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTG
TCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGCCGCTGCATCCGGGAGA
TCCCTGACCCTGATGGCGCTGAACTGCTCTGCTGCACCTTCCAGCCCGTCAACAACAACCTCAC
CGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACGGGCAAGAAAGTGAAG
GGGGGCTCCAGCAAGCTGACGGGCCGTGTCCTTGCTCTGTCCTTTGATGCCCCTGGCCGGCTGC
TCTGGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCCTCTTCGACATGGCCACGGGGAAGCT
GACCAAAGCCAAGCGTCTGGTGGTGCATGAGGGGAGCCCTGTGACCAGCATCTCAGCCCGGTCC
TGGGTCAGCCGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCTTGCCTCAACAAGCTGCTGC
TCTACAGGGTGGTAGACAACGAGGGGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAG
CTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGTG
ACGGGCAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCCGTCA
ACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCTACT
GGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAGCAGAAGTAGGGTCCTGTC
AGCCCTGCTGCTGTCCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCG
GTGGTCGTGCTGAGGGCCAGCTCCCAACTCTGCCAGGGACGGGCAGGGCAGCGGGCAGCTCCAG
AAACACGGTGGAACGGG

hide sequence

RefSeq Acc Id:

XM_007991599 ⟹ XP_007989790

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	X	45,721,759 - 45,729,152 (+)	NCBI
Vero_WHO_p1.0	NW_023666076	11,198,429 - 11,205,797 (+)	NCBI

Sequence:

show sequence

TGTGTGTCACCCCGGCGCTGCCCAGGAAGGGCAGGGCTGGGGTGATGACCATGGTAACAGCCGG
GTGGGAGTTCGTGACATCTCCGGCGCGGAGGGACTCGATGTCTATGGCAGTGGTCGCCTGGCGG
ACGGGACGGAACTAGATCCCTTCGCTCGGGACGCTCACATTCCAGGCCCTTGTCCTGCAGGCTC
CCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGC
AGTGGACGCGAGGTGAGGCGTGGGGTCGAAGCCCAGGGGAGCAGAACTTACTGTGGTGCATGCG
CAATGGCGATAAGTGAGGCTGGGCGGAGAACTTGCCTTAATGCGGCTGCGTGGGCATGCCGGAG
GTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGC
CAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAGTACCTGAGGC
TTCGGGGGCAGCTGCTGGGCCAGCGCTACGGACCCCTCTCTGAGCCAGGCAGTGCTCGTGCCTA
TAGCAACAGCATCGTCCGCAGTAGCCGCACTACCCTTGACCGCATGGAGGACTTTGAGGATGAT
CCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCCGAGGCTCCTACCAGCTGCAGG
CACAGATGAACCGTGCTGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCGGC
AGAGGCAAGTCGGGCCATGGCCGGGGACACATCACTGAGCGAGAACTATGCCTTTGCGGGCATG
TACCATGTTTTTGACCAGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCGAATGATGACC
GGCACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCCGCCCC
ACCCACAGTGCTTCGTGTGCTACGGGGCCACACCCGTGGTGTCTCTGACTTCGCCTGGTCCCTC
TCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATG
GCCGCTGCATCCGGGAGATCCCTGACCCTGATGGCGCTGAACTGCTCTGCTGCACCTTCCAGCC
CGTCAACAACAACCTCACCGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCC
ACGGGCAAGAAAGTGAAGGGGGGCTCCAGCAAGCTGACGGGCCGTGTCCTTGCTCTGTCCTTTG
ATGCCCCTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCCTCTTCGA
CATGGCCACGGGGAAGCTGACCAAAGCCAAGCGTCTGGTGGTGCATGAGGGGAGCCCTGTGACC
AGCATCTCAGCCCGGTCCTGGGTCAGCCGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCTT
GCCTCAACAAGCTGCTGCTCTACAGGGTGGTAGACAACGAGGGGACCCTGCAGCTGAAGAGAAG
CTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGC
CAGGGGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGG
CGGCCAAGGCTGCCGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAA
CTGCGACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAG
CAGAAGTAGGGTCCTGTCAGCCCTGCTGCTGTCCTCCATCCCACCCCTCTTACTCCAGCCTCGT
GTTGTAAATAAAGTTTCGGTGGTCGTGCTGAGGGCCAGCTCCCAACTCTGCCAGGGACGGGCAG
GGCAGCGGGCAGCTCCAGAAACACGGTGGAACGGG

hide sequence

RefSeq Acc Id:

XM_037992944 ⟹ XP_037848872

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666076	11,198,154 - 11,205,800 (+)	NCBI

RefSeq Acc Id:

XM_037992945 ⟹ XP_037848873

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666076	11,198,138 - 11,205,800 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007989787	(Get FASTA)	NCBI Sequence Viewer
	XP_007989788	(Get FASTA)	NCBI Sequence Viewer
	XP_007989790	(Get FASTA)	NCBI Sequence Viewer
	XP_037848872	(Get FASTA)	NCBI Sequence Viewer
	XP_037848873	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000009404.1

RefSeq Acc Id:	XP_007989787 ⟸ XM_007991596
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RLB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007989788 ⟸ XM_007991597
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RLB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007989790 ⟸ XM_007991599
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RLB5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000009404 ⟸ ENSCSAT00000011326

RefSeq Acc Id:	XP_037848873 ⟸ XM_037992945
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037848872 ⟸ XM_037992944
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000013235	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000011326.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
	WD_repeat-ST_regulator	UniProtKB/TrEMBL
NCBI Gene	WDR13	ENTREZGENE
PANTHER	WD REPEAT PROTEIN 26-RELATED	UniProtKB/TrEMBL
	WD REPEAT-CONTAINING PROTEIN 13	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50978	UniProtKB/TrEMBL
UniProt	A0A0D9RLB5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar