DUX4 (double homeobox 4) - Rat Genome Database

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Gene: DUX4 (double homeobox 4) Chlorocebus sabaeus
Analyze
Symbol: DUX4
Name: double homeobox 4
RGD ID: 18756411
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of G0 to G1 transition (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); facioscapulohumeral muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: double homeobox protein 4; double homeobox protein 4-like protein 4; LOC103247660
RGD Orthologs
Human
Mouse
Dog
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023666037116,205,175 - 116,206,432 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
DUX4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023666037116,205,175 - 116,206,432 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DUX4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384190,173,774 - 190,185,911 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4190,173,774 - 190,185,942 (+)EnsemblGRCh38hg38GRCh38
Cytogenetic Map4q35.2NCBI
CHM1_14190,981,942 - 190,983,445 (+)NCBICHM1_1
T2T-CHM13v2.04193,541,579 - 193,553,139 (+)NCBIT2T-CHM13v2.0
Duxbl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391425,979,011 - 25,990,590 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1425,979,001 - 25,990,512 (+)EnsemblGRCm39 Ensembl
GRCm381425,978,560 - 25,990,166 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1426,118,349 - 26,129,763 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1425,978,577 - 25,990,088 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1426,257,962 - 26,269,436 (+)EnsemblGRCm38mm10GRCm38
MGSCv371426,802,491 - 26,809,318 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361424,816,189 - 24,823,016 (+)NCBIMGSCv36mm8
Cytogenetic Map14A3NCBI
cM Map1415.3NCBI
LOC100683783
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11764,277,421 - 64,282,701 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1763,676,530 - 63,684,952 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01765,398,792 - 65,407,412 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11764,194,207 - 64,199,472 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01764,260,323 - 64,264,770 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01764,995,675 - 64,998,742 (-)NCBIUU_Cfam_GSD_1.0
UU_Cfam_GSD_1.01764,999,186 - 65,004,132 (-)NCBIUU_Cfam_GSD_1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_037994599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_037994599   ⟹   XP_037850527
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666037116,205,175 - 116,206,432 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037850527 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037850527   ⟸   XM_037994599


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC103247660 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 DUX4  double homeobox 4  LOC103247660  double homeobox protein 4-like protein 4  Symbol and/or name change 5135510 APPROVED