BSPH1 (binder of sperm protein homolog 1) - Rat Genome Database

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Gene: BSPH1 (binder of sperm protein homolog 1) Chlorocebus sabaeus
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Symbol: BSPH1
Name: binder of sperm protein homolog 1
RGD ID: 18715547
Description: ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN sperm capacitation (ortholog); FOUND IN cell surface (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,234,737 - 41,253,039 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607321,017,702 - 21,019,228 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cell surface  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
BSPH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,234,737 - 41,253,039 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607321,017,702 - 21,019,228 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
BSPH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381947,967,258 - 47,992,170 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1947,968,046 - 47,992,170 (-)EnsemblGRCh38hg38GRCh38
GRCh371948,471,303 - 48,495,427 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,163,115 - 53,187,239 (-)NCBINCBI36Build 36hg18NCBI36
Celera1945,336,802 - 45,361,003 (-)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1944,853,535 - 44,877,476 (-)NCBIHuRef
CHM1_11948,473,221 - 48,497,337 (-)NCBICHM1_1
T2T-CHM13v2.01950,959,608 - 50,984,497 (-)NCBIT2T-CHM13v2.0
Bsph1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39713,184,766 - 13,207,375 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl713,184,766 - 13,207,374 (+)EnsemblGRCm39 Ensembl
GRCm38713,450,841 - 13,473,450 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl713,450,841 - 13,473,449 (+)EnsemblGRCm38mm10GRCm38
MGSCv37714,036,190 - 14,058,798 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36712,351,020 - 12,373,628 (+)NCBIMGSCv36mm8
Celera711,068,322 - 11,090,376 (+)NCBICelera
Cytogenetic Map7A1NCBI
cM Map77.89NCBI
Bsph1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8183,549,565 - 83,585,706 (+)NCBIGRCr8
mRatBN7.2174,413,976 - 74,450,117 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl174,411,200 - 74,450,120 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0175,705,172 - 75,793,950 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl175,748,916 - 75,789,785 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0177,033,418 - 77,094,538 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4174,045,645 - 74,084,661 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera169,843,118 - 69,942,551 (+)NCBICelera
Cytogenetic Map1q21NCBI
Bsph1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955609261,937 - 266,866 (+)NCBIChiLan1.0ChiLan1.0
BSPH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,077,554 - 54,096,962 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11955,942,742 - 55,966,781 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01944,907,826 - 44,933,116 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11953,559,937 - 53,583,726 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1953,559,937 - 53,583,726 (-)Ensemblpanpan1.1panPan2
BSPH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11108,187,315 - 108,207,096 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,670,110 - 107,689,899 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,713,160 - 108,732,137 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11108,382,792 - 108,402,323 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01108,026,079 - 108,045,637 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,893,963 - 108,912,977 (+)NCBIUU_Cfam_GSD_1.0
LOC101963272
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934920,161,472 - 20,171,703 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366641,779,662 - 1,789,727 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BSPH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl653,566,667 - 53,569,308 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1653,566,334 - 53,570,282 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,149,649 - 49,164,791 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Bsph1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248325,823,293 - 5,836,540 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007997381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_007997381   ⟹   XP_007995572
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1641,234,737 - 41,253,039 (-)NCBI
Vero_WHO_p1.0NW_02366607321,017,702 - 21,019,228 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007995572 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_007995572   ⟸   XM_007997381


Additional Information

Database Acc Id Source(s)
NCBI Gene BSPH1 ENTREZGENE