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Gene: ARHGEF39 (Rho guanine nucleotide exchange factor 39) Chlorocebus sabaeus

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Symbol:

ARHGEF39

Name:

Rho guanine nucleotide exchange factor 39

RGD ID:

18709584

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN positive regulation of cell migration (inferred); ASSOCIATED WITH acromesomelic dysplasia, Maroteaux type (ortholog); anauxetic dysplasia (ortholog); autosomal recessive distal hereditary motor neuronopathy 2 (ortholog); FOUND IN plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	44,937,488 - 44,941,708 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	44,937,923 - 44,944,842 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,047,396 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARHGEF39	Green Monkey	acromesomelic dysplasia, Maroteaux type		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Acromesomelic dysplasia 1 and Maroteaux type	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	anauxetic dysplasia		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Anauxetic dysplasia	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	autosomal recessive distal hereditary motor neuronopathy 2		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive distal spinal muscular atrophy 2	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	distal arthrogryposis type 1A		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Arthrogryposis more ...	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	frontotemporal dementia and/or amyotrophic lateral sclerosis 6		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Frontotemporal dementia and/or amyotrophic lateral sclerosis 6	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	galactosemia		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase	ClinVar	PMID:28492532
ARHGEF39	Green Monkey	hyperphosphatasia with impaired intellectual development syndrome 2		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 6	ClinVar	PMID:22683086 more ...
ARHGEF39	Green Monkey	paraplegia		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Spastic paraplegia	ClinVar	PMID:23332916 more ...
ARHGEF39	Green Monkey	primary ciliary dyskinesia		ISO	ARHGEF39 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Primary ciliary dyskinesia	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARHGEF39	Green Monkey	hepatocellular carcinoma		ISO	ARHGEF39 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:28284560

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARHGEF39	Green Monkey	positive regulation of cell migration	involved_in	IEA	UniProtKB:Q8N4T4 and ensembl:ENSP00000367638	150520179		Ensembl	GO_REF:0000107
ARHGEF39	Green Monkey	positive regulation of cell migration	involved_in	IEA	PANTHER:PTN000517494	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARHGEF39	Green Monkey	plasma membrane	located_in	IEA	UniProtKB:Q8N4T4 and ensembl:ENSP00000367638	150520179		Ensembl	GO_REF:0000107
ARHGEF39	Green Monkey	plasma membrane	located_in	IEA	PANTHER:PTN000517494	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARHGEF39	Green Monkey	guanyl-nucleotide exchange factor activity	enables	IEA	InterPro:IPR000219	150520179		InterPro	GO_REF:0000002
ARHGEF39	Green Monkey	protein binding	enables	ISO	UniProtKB:Q2T9J0	9068941	PMID:33961781	IntAct	PMID:33961781
ARHGEF39	Green Monkey	protein binding	enables	ISO	UniProtKB:Q13137 and UniProtKB:Q96CG3	9068941	PMID:25416956 and PMID:31515488	IntAct	PMID:25416956 and PMID:31515488

PMID:22301074	PMID:30032202

ARHGEF39
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	44,937,488 - 44,941,708 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	44,937,923 - 44,944,842 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,047,396 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ARHGEF39
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	35,659,343 - 35,665,195 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	35,658,875 - 35,675,866 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	35,659,340 - 35,665,192 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	35,649,341 - 35,655,278 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	35,648,873 - 35,655,189	NCBI
Celera	9	35,592,890 - 35,598,827 (-)	NCBI		Celera
Cytogenetic Map	9	p13.3	NCBI
HuRef	9	35,614,950 - 35,620,887 (-)	NCBI		HuRef
CHM1_1	9	35,659,169 - 35,665,106 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	35,679,995 - 35,685,847 (-)	NCBI		T2T-CHM13v2.0

Arhgef39
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	43,496,139 - 43,508,747 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	43,496,142 - 43,499,695 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	43,496,139 - 43,508,747 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	43,496,142 - 43,499,695 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	43,509,014 - 43,512,532 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	43,517,242 - 43,520,730 (-)	NCBI		MGSCv36	mm8
Celera	4	43,530,162 - 43,533,680 (-)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	23.04	NCBI

Arhgef39
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	62,548,300 - 62,551,870 (-)	NCBI		GRCr8
mRatBN7.2	5	57,752,509 - 57,756,079 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	57,752,509 - 57,756,109 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	59,732,391 - 59,735,965 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	61,551,204 - 61,554,778 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	61,522,655 - 61,526,213 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	58,998,209 - 59,001,779 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	58,995,249 - 59,001,800 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	63,522,803 - 63,526,373 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	59,977,497 - 59,979,258 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	59,976,596 - 59,979,421 (-)	NCBI
Celera	5	56,333,084 - 56,336,654 (-)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

Arhgef39
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955472	633,405 - 640,305 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955472	633,474 - 636,440 (+)	NCBI	ChiLan1.0	ChiLan1.0

ARHGEF39
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	88,920,738 - 88,928,473 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	88,926,669 - 88,934,538 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	35,510,876 - 35,517,299 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	36,313,296 - 36,319,732 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	36,313,296 - 36,319,732 (-)	Ensembl	panpan1.1		panPan2

ARHGEF39
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	52,191,170 - 52,200,769 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	52,196,462 - 52,200,778 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	50,765,489 - 50,768,556 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	53,256,556 - 53,265,956 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	53,261,492 - 53,271,849 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	51,807,441 - 51,810,506 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	51,790,921 - 51,793,983 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	52,493,055 - 52,496,124 (-)	NCBI		UU_Cfam_GSD_1.0

Arhgef39
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	167,110,767 - 167,126,613 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	3,660,454 - 3,663,696 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	3,660,364 - 3,663,664 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARHGEF39
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	236,383,925 - 236,387,667 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	236,383,684 - 236,387,705 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	264,108,957 - 264,120,992 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Arhgef39
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624868	5,126,781 - 5,130,320 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624868	5,126,041 - 5,130,696 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in ARHGEF39
46 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20


RefSeq Transcripts	XM_007968814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000008484 ⟹ ENSCSAP00000006631

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	12	44,937,923 - 44,944,842 (+)	Ensembl

RefSeq Acc Id:

XM_007968814 ⟹ XP_007967005

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	44,937,490 - 44,941,708 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,046,556 (+)	NCBI

Sequence:

show sequence

CATTCCTTCAAATAGCTATACCTTTTCCTAGCCAATTCTGGGAACAACCGACCCCCTGGTATTCGGCATGGGCCCAGGACAGAATGTATACTGTAATGATCGCGCCCCACCCCCATCCAATTCTCCAG
ATAGGACACTAAGTTCCTGCCAGCATCTGCAGCCTGTCTCCTGACTGAAAGTTCAGGCTGCTGCTCCAACATAGTGCCACTCAGAGGAGGGCCCCACAGCTGCCCCACCCCGCCCTGCCCCTGCCGGC
GCCGCGCACCTAAGGCGCCGCCCTGGCGGTGGGGCAGGACGAAAGAGACCCTGCGCGGTCCGGCCGGCCGCCGCGCATGCTCATTCCTGCGCGCTGCCCTCCCCGGCCCCGCCTCCGCGGCTCCCGCC
CTAGAGCGGTTGGGATTTGAATCTGCTGGGGGTTGCAGCCGGAAGTGTCTATCCCCTAGCCAGGCATGGAGATCCACTACCCGGGTGTGCGGTCCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGG
AAACGCGCTCGCACCGCCCGGGAGCTGCTAGAGACTGAGCGGCGCTACCAAGAACAGCTGGGGCTGGTGGCCACGTACTTTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCA
GGCCCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGGAAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTG
CTGCCAACTCGGAGAGATCCCAGACTACCCTGCAGGAGCAGCTAAAGAAAAATAAAGGTTTCCGGAGGTTTGTGCGGCTTCAGGAAAGCCGCCCTGAGTTTGGGGGCCTTCAGCTCCAGGACCTACTC
CCTCTGCCTCTGCAGCGGCTCCAGCAGTATGAGAATCTCGTCGTTGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGGGCTGCCCGACTGATAAGTGAGACTGCCCA
GAGAGTCCACACTATTGGTCAGAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTACGCCAGGGCTGGCTGT
TGGTGGTGCCTCCCCATGGGGACCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCTCCTCATGGCCAAGCCTCGACCGCCACTGCACCTGCTGCAGAGTGGCACCTTTGCCTGCAAGGGCCTC
TACCCCATGGCCCATTGTCAACTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTGTGGTGGGTTGCTCAGTCTCCATGGAAACAGCAAGGGCTTCAGCTTTAGCCTGGACCTTTCTGAGCCATGCGC
TAAGAGGTGGTCTCTCTCTAGCTGTCCTTCCCTCATGAGAAGCTACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACACTGGTACCACAGTCTAACTTGGGCTATCAGCAGCCAGAAAAACTAGAG
GAATCTTACAGATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAGGAGTACAAAGGAATCTTCTTCAGTACTGAACAAAACAGAACCCTTCATGATTTGACAAAGGTCACTTTGTGTTTCC
CTGGACCAAGCTACTCAAGATCACCTGACCAACTCTTAAAAATCACGACCAGGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAAGCAGCGGTGGGAGGATCGTTTGAGCCCAGGAGTTCAA
GACCAGCCTGGGCAACACAGTGAGTGAGACCCTGTCTCTATTTAAGAAAAAATAATTAAGAAATTTTACTAAAAAAGAAGAATCAGGAAACCAAGTCTGACCCAACGGAACCAGCCCCTAACACAGAT
GAGGGGATTTGGGACTGATAAGCTCCGTGCTGTGTCCATGGCCCATCATTTATCAAGGCTGCAGCTTTGTAAATGTGGCTATTTTTATGTTGTGTGTAGTTTCTATCATTTATTTTTCCACTGGATTT
GAGTAAAGTTTTTTTCTTTTTTTGGGGAAAGACA

hide sequence

RefSeq Acc Id:

XM_007968815 ⟹ XP_007967006

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	44,937,488 - 44,941,708 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,046,556 (+)	NCBI

Sequence:

show sequence

ATCATTCCTTCAAATAGCTATACCTTTTCCTAGCCAATTCTGGGAACAACCGACCCCCTGGTAT
TCGGCATGGGCCCAGGACAGAATGTATACTGTAATGATCGCGCCCCACCCCCATCCAATTCTCCAGATAGGACACTAAGTTCCTGCCAGCATCTGCAGCCTGTCTCCTGACTGAAAGTTCAGGCTGCT
GCTCCAACATAGTGCCACTCAGAGGAGGGCCCCACAGCTGCCCCACCCCGCCCTGCCCCTGCCGGCGCCGCGCACCTAAGGCGCCGCCCTGGCGGTGGGGCAGGACGAAAGAGACCCTGCGCGGTCCG
GCCGGCCGCCGCGCATGCTCATTCCTGCGCGCTGCCCTCCCCGGCCCCGCCTCCGCGGCTCCCGCCCTAGAGCGGTTGGGATTTGAATCTGCTGGGGGTTGCAGCCGGAAGTGTCTATCCCCTAGCCA
GGCATGGAGATCCACTACCCGGGTGTGCGGTCCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCTCGCACCGCCCGGGAGCTGCTAGAGACTGAGCGGCGCTACCAAGAACAGCTGGG
GCTGGTGGCCACGTACTTTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCAGGCCCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGG
AAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTGCTGCCAACTCGGAGAGATCCCAGACTACCCTGCAGGAGCAGCTAAAGAAAAATAAAGGTTTC
CGGAGGTTTGTGCGGCTTCAGGAAAGCCGCCCTGAGTTTGGGGGCCTTCAGCTCCAGGACCTACTCCCTCTGCCTCTGCAGCGGCTCCAGCAGTATGAGAATCTCGTCGTTGCTTTGGCTGAAAACAC
AGGTCCCAACAGCCCTGACCATCAACAGCTCACACGGGCTGCCCGACTGATAAGTGAGACTGCCCAGAGAGTCCACACTATTGGTCAGAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTC
TGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTACGCCAGGGCTGGCTGTTGGTGGTGCCTCCCCATGGGGACCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCTC
CTCATGGCCAAGCCTCGACCGCCACTGCACCTGCTGCAGAGTGGCACCTTTGCCTGCAAGGGCCTCTACCCCATGGCCCATTGTCAACTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTGTGGTGG
GTTGCTCAGTCTCCATGGAAACAGCAAGGGCTTCAGCTTTAGCCTGGACCTTTCTGAGCCATGCGCTAAGAGGTGGTCTCTCTCTAGCTGTCCTTCCCTCATGAGAAGCTACTGCTTATGTCCACAGA
CCAGGAGGAGCTGTCACACTGGTACCACAGTCTAACTTGGGCTATCAGCCAGAAAAACTAGAGGAATCTTACAGATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAGGAGTACAAAGGAA
TCTTCTTCAGTACTGAACAAAACAGAACCCTTCATGATTTGACAAAGGTCACTTTGTGTTTCCCTGGACCAAGCTACTCAAGATCACCTGACCAACTCTTAAAAATCACGACCAGGCACAGTGGCTCA
TGCCTGTAATCCCAGCACTTTGGGAAGCAGCGGTGGGAGGATCGTTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAACACAGTGAGTGAGACCCTGTCTCTATTTAAGAAAAAATAATTAAGAAATT
TTACTAAAAAAGAAGAATCAGGAAACCAAGTCTGACCCAACGGAACCAGCCCCTAACACAGATGAGGGGATTTGGGACTGATAAGCTCCGTGCTGTGTCCATGGCCCATCATTTATCAAGGCTGCAGC
TTTGTAAATGTGGCTATTTTTATGTTGTGTGTAGTTTCTATCATTTATTTTTCCACTGGATTTGAGTAAAGTTTTTTTCTTTTTTTGGGGAAAGACA

hide sequence

RefSeq Acc Id:

XM_007968816 ⟹ XP_007967007

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	44,937,493 - 44,941,708 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,047,396 (+)	NCBI

Sequence:

show sequence

TCCTTCAAATAGCTATACCTTTTCCTAGCCAATTCTGGGAACAACCGACCCCCTGGTATTCGGCATGGGCCCAGGACAGAATGTATACTGTAATGATCGCGCCCCACCCCCATCCAATTCTCCAGATA
GGACACTAAGTTCCTGCCAGCATCTGCAGCCTGTCTCCTGACTGAAAGTTCAGGCTGCTGCTCCAACATAGTGCCACTCAGAGGAGGGCCCCACAGCTGCCCCACCCCGCCCTGCCCCTGCCGGCGCC
GCGCACCTAAGGCGCCGCCCTGGCGGTGGGGCAGGACGAAAGAGACCCTGCGCGGTCCGGCCGGCCGCCGCGCATGCTCATTCCTGCGCGCTGCCCTCCCCGGCCCCGCCTCCGCGGCTCCCGCCCTA
GAGCGGTTGGGATTTGAATCTGCTGGGGGTTGCAGCCGGAAGTGTCTATCCCCTAGCCAGGCATGGAGATCCACTACCCGGGTGTGCGGTCCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAA
CGCGCTCGCACCGCCCGGGAGCTGCTAGAGACTGAGCGGCGCTACCAAGAACAGCTGGGGCTGGTGGCCACGTACTTTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCAGGC
CCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGGAAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTGCTG
CCAACTCGGAGAGATCCCAGACTACCCTGCAGGAGCAGCTAAAGAAAAATAAAGGTTTCCGGAGGTTTGTGCGGCTTCAGGAAAGCCGCCCTGAGTTTGGGGGCCTTCAGCTCCAGGACCTACTCCCT
CTGCCTCTGCAGCGGCTCCAGCAGTATGAGAATCTCGTCGTTGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGGGCTGCCCGACTGATAAGTGAGACTGCCCAGAG
AGTCCACACTATTGGTCAGAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTACGCCAGGGCTGGCTGTTGG
TGGTGCCTCCCCATGGGGACCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCTCCTCATGGCCAAGCCTCGACCGCCACTGCACCTGCTGCAGAGTGGCACCTTTGCCTGCAAGGGCCTCTAC
CCCATGGCCCATTGTCAACTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTGTGGTGGGTTGCTCAGTCTGTCCTTCCCTCATGAGAAGCTACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACA
CTGGTACCACAGTCTAACTTGGGCTATCAGCAGCCAGAAAAACTAGAGGAATCTTACAGATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAGGAGTACAAAGGAATCTTCTTCAGTACTG
AACAAAACAGAACCCTTCATGATTTGACAAAGGTCACTTTGTGTTTCCCTGGACCAAGCTACTCAAGATCACCTGACCAACTCTTAAAAATCACGACCAGGCACAGTGGCTCATGCCTGTAATCCCAG
CACTTTGGGAAGCAGCGGTGGGAGGATCGTTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAACACAGTGAGTGAGACCCTGTCTCTATTTAAGAAAAAATAATTAAGAAATTTTACTAAAAAAGAAG
AATCAGGAAACCAAGTCTGACCCAACGGAACCAGCCCCTAACACAGATGAGGGGATTTGGGACTGATAAGCTCCGTGCTGTGTCCATGGCCCATCATTTATCAAGGCTGCAGCTTTGTAAATGTGGCT
ATTTTTATGTTGTGTGTAGTTTCTATCATTTATTTTTCCACTGGATTTGAGTAAAGTTTTTTTCTTTTTTTGGGGAAAGACA

hide sequence

RefSeq Acc Id:

XM_007968817 ⟹ XP_007967008

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	44,937,490 - 44,941,708 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,046,556 (+)	NCBI

Sequence:

show sequence

CATTCCTTCAAATAGCTATACCTTTTCCTAGCCAATTCTGGGAACAACCGACCCCCTGGTATTCGGCATGGGCCCAGGACAGAATGTATACTGTAATGATCGCGCCCCACCCCCATCCAATTCTCCAG
ATAGGACACTAAGTTCCTGCCAGCATCTGCAGCCTGTCTCCTGACTGAAAGTTCAGGCTGCTGCTCCAACATAGTGCCACTCAGAGGAGGGCCCCACAGCTGCCCCACCCCGCCCTGCCCCTGCCGGC
GCCGCGCACCTAAGGCGCCGCCCTGGCGGTGGGGCAGGACGAAAGAGACCCTGCGCGGTCCGGCCGGCCGCCGCGCATGCTCATTCCTGCGCGCTGCCCTCCCCGGCCCCGCCTCCGCGGCTCCCGCC
CTAGAGCGGTTGGGATTTGAATCTGCTGGGGGTTGCAGCCGGAAGTGTCTATCCCCTAGCCAGGCATGGAGATCCACTACCCGGGTGTGCGGTCCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGG
AAACGCGCTCGCACCGCCCGGGAGCTGCTAGAGACTGAGCGGCGCTACCAAGAACAGCTGGGGCTGGTGGCCACGTACTTTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCA
GGCCCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGGAAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTG
CTGCCAACTCGGAGAGATCCCAGACTACCCTGCAGGAGCAGCTAAAGAAAAATAAAGGTTTCCGGAGGTTTGTGCGGCTTCAGGAAAGCCGCCCTGAGTTTGGGGGCCTTCAGCTCCAGGACCTACTC
CCTCTGCCTCTGCAGCGGCTCCAGCAGTATGAGAATCTCGTCGTTGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGGGCTGCCCGACTGATAAGTGAGACTGCCCA
GAGAGTCCACACTATTGGTCAGAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTACGCCAGGGCTGGCTGT
TGGTGGTGCCTCCCCATGGGGACCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCTCCTCATGGCCAAGCCTCGACCGCCACTGCACCTGCTGCAGAGTGGCACCTTTGCCTGCAAGGGCCTC
TACCCCATGGCCCATTGTCAACTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTGTGGTGGGTTGCTCAGTCTGTCCTTCCCTCATGAGAAGCTACTGCTTATGTCCACAGACCAGGAGGAGCTGTC
ACACTGGTACCACAGTCTAACTTGGGCTATCAGCCAGAAAAACTAGAGGAATCTTACAGATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAGGAGTACAAAGGAATCTTCTTCAGTACTG
AACAAAACAGAACCCTTCATGATTTGACAAAGGTCACTTTGTGTTTCCCTGGACCAAGCTACTCAAGATCACCTGACCAACTCTTAAAAATCACGACCAGGCACAGTGGCTCATGCCTGTAATCCCAG
CACTTTGGGAAGCAGCGGTGGGAGGATCGTTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAACACAGTGAGTGAGACCCTGTCTCTATTTAAGAAAAAATAATTAAGAAATTTTACTAAAAAAGAAG
AATCAGGAAACCAAGTCTGACCCAACGGAACCAGCCCCTAACACAGATGAGGGGATTTGGGACTGATAAGCTCCGTGCTGTGTCCATGGCCCATCATTTATCAAGGCTGCAGCTTTGTAAATGTGGCT
ATTTTTATGTTGTGTGTAGTTTCTATCATTTATTTTTCCACTGGATTTGAGTAAAGTTTTTTTCTTTTTTTGGGGAAAGACA

hide sequence

RefSeq Acc Id:

XM_007968818 ⟹ XP_007967009

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	44,937,491 - 44,941,708 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,046,556 (+)	NCBI

Sequence:

show sequence

ATTCCTTCAAATAGCTATACCTTTTCCTAGCCAATTCTGGGAACAACCGACCCCCTGGTATTCGGCATGGGCCCAGGACAGAATGTATACTGTAATGATCGCGCCCCACCCCCATCCAATTCTCCAGA
TAGGACACTAAGTTCCTGCCAGCATCTGCAGCCTGTCTCCTGACTGAAAGTTCAGGCTGCTGCTCCAACATAGTGCCACTCAGAGGAGGGCCCCACAGCTGCCCCACCCCGCCCTGCCCCTGCCGGCG
CCGCGCACCTAAGGCGCCGCCCTGGCGGTGGGGCAGGACGAAAGAGACCCTGCGCGGTCCGGCCGGCCGCCGCGCATGCTCATTCCTGCGCGCTGCCCTCCCCGGCCCCGCCTCCGCGGCTCCCGCCC
TAGAGCGGTTGGGATTTGAATCTGCTGGGGGTTGCAGCCGGAAGTGTCTATCCCCTAGCCAGGCATGGAGATCCACTACCCGGGTGTGCGGTCCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGA
AACGCGCTCGCACCGCCCGGGAGCTGCTAGAGACTGAGCGGCGCTACCAAGAACAGCTGGGGCTGGTGGCCACGTACTTTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCAG
GCCCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGGAAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTGC
TGCCAACTCGGAGAGATCCCAGACTACCCTGCAGGAGCAGCTAAAGAAAAATAAAGGTTTCCGGAGGTTTGTGCGGCTTCAGGAAAGCCGCCCTGAGTTTGGGGGCCTTCAGCTCCAGGACCTACTCC
CTCTGCCTCTGCAGCGGCTCCAGCAGTATGAGAATCTCGTCGTTGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGGCGCTGGTTCCTACGCCAGGGCTGGCTGTTG
GTGGTGCCTCCCCATGGGGACCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCTCCTCATGGCCAAGCCTCGACCGCCACTGCACCTGCTGCAGAGTGGCACCTTTGCCTGCAAGGGCCTCTA
CCCCATGGCCCATTGTCAACTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTGTGGTGGGTTGCTCAGTCTCCATGGAAACAGCAAGGGCTTCAGCTTTAGCCTGGACCTTTCTGAGCCATGCGCTA
AGAGGTGGTCTCTCTCTAGCTGTCCTTCCCTCATGAGAAGCTACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACACTGGTACCACAGTCTAACTTGGGCTATCAGCAGCCAGAAAAACTAGAGGA
ATCTTACAGATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAGGAGTACAAAGGAATCTTCTTCAGTACTGAACAAAACAGAACCCTTCATGATTTGACAAAGGTCACTTTGTGTTTCCCT
GGACCAAGCTACTCAAGATCACCTGACCAACTCTTAAAAATCACGACCAGGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAAGCAGCGGTGGGAGGATCGTTTGAGCCCAGGAGTTCAAGA
CCAGCCTGGGCAACACAGTGAGTGAGACCCTGTCTCTATTTAAGAAAAAATAATTAAGAAATTTTACTAAAAAAGAAGAATCAGGAAACCAAGTCTGACCCAACGGAACCAGCCCCTAACACAGATGA
GGGGATTTGGGACTGATAAGCTCCGTGCTGTGTCCATGGCCCATCATTTATCAAGGCTGCAGCTTTGTAAATGTGGCTATTTTTATGTTGTGTGTAGTTTCTATCATTTATTTTTCCACTGGATTTGA
GTAAAGTTTTTTTCTTTTTTTGGGGAAAGACA

hide sequence

RefSeq Acc Id:

XM_037998272 ⟹ XP_037854200

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	42,042,641 - 42,046,556 (+)	NCBI


Protein RefSeqs	XP_007967005	(Get FASTA)	NCBI Sequence Viewer
	XP_007967006	(Get FASTA)	NCBI Sequence Viewer
	XP_007967007	(Get FASTA)	NCBI Sequence Viewer
	XP_007967008	(Get FASTA)	NCBI Sequence Viewer
	XP_007967009	(Get FASTA)	NCBI Sequence Viewer
	XP_037854200	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006631
	ENSCSAP00000006631.1

RefSeq Acc Id:	XP_007967006 ⟸ XM_007968815
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007967005 ⟸ XM_007968814
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007967008 ⟸ XM_007968817
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_007967009 ⟸ XM_007968818
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_007967007 ⟸ XM_007968816
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RDE2 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010393	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008484.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.900.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	ARHGEF39	UniProtKB/TrEMBL
	DBL_dom_sf	UniProtKB/TrEMBL
	DH-domain	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
NCBI Gene	ARHGEF39	ENTREZGENE
PANTHER	PTHR47056	UniProtKB/TrEMBL
	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 39	UniProtKB/TrEMBL
Pfam	PF00169	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
PROSITE	DH_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
SMART	RhoGEF	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF48065	UniProtKB/TrEMBL
UniProt	A0A0D9RDE2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD