BAIAP3 (BAI1 associated protein 3) - Rat Genome Database

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Gene: BAIAP3 (BAI1 associated protein 3) Chlorocebus sabaeus
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Symbol: BAIAP3
Name: BAI1 associated protein 3
RGD ID: 18703938
Description: ENCODES a protein that exhibits calcium ion binding (inferred); phospholipid binding (inferred); SNARE binding (inferred); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH epilepsy (ortholog); idiopathic generalized epilepsy (ortholog); long QT syndrome (ortholog); FOUND IN dense core granule (ortholog); early endosome membrane (ortholog); GABA-ergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: BAI1-associated protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,222,994 - 1,237,823 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl51,227,910 - 1,236,898 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606829,845,977 - 29,861,169 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
BAIAP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,222,994 - 1,237,823 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl51,227,910 - 1,236,898 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606829,845,977 - 29,861,169 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
BAIAP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38161,333,645 - 1,349,439 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl161,333,638 - 1,349,439 (+)EnsemblGRCh38hg38GRCh38
GRCh37161,383,646 - 1,399,440 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,324,664 - 1,339,443 (+)NCBINCBI36Build 36hg18NCBI36
Build 34161,324,663 - 1,339,443NCBI
Celera161,598,966 - 1,613,557 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef161,311,766 - 1,327,840 (+)NCBIHuRef
CHM1_1161,383,551 - 1,399,383 (+)NCBICHM1_1
T2T-CHM13v2.0161,349,821 - 1,365,616 (+)NCBIT2T-CHM13v2.0
Baiap3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391725,461,633 - 25,475,255 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1725,461,633 - 25,475,338 (-)EnsemblGRCm39 Ensembl
GRCm381725,242,659 - 25,256,364 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1725,242,659 - 25,256,364 (-)EnsemblGRCm38mm10GRCm38
MGSCv371725,379,604 - 25,393,309 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1722,580,768 - 22,581,139 (-)NCBICelera
Celera1725,770,653 - 25,783,532 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.53NCBI
Baiap3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,764,768 - 14,777,516 (-)NCBIGRCr8
mRatBN7.21014,260,269 - 14,273,019 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1014,260,269 - 14,273,019 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1019,001,012 - 19,013,814 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01018,489,874 - 18,502,678 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,989,089 - 14,001,887 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01014,601,133 - 14,613,881 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,599,197 - 14,613,878 (-)EnsemblRnor6.0rn6Rnor6.0
Celera1013,932,693 - 13,945,435 (-)NCBICelera
Cytogenetic Map10q12NCBI
Baiap3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,884,034 - 15,898,396 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,884,034 - 15,897,894 (-)NCBIChiLan1.0ChiLan1.0
BAIAP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2181,596,824 - 1,612,527 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1165,384,005 - 5,399,773 (+)NCBINHGRI_mPanPan1
PanPan1.1161,389,145 - 1,404,929 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl161,390,160 - 1,403,978 (+)Ensemblpanpan1.1panPan2
BAIAP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1639,421,019 - 39,434,539 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl639,427,520 - 39,435,596 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,688,840 - 40,703,473 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,767,134 - 39,781,842 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1639,443,862 - 39,458,489 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0639,416,505 - 39,431,131 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,894,814 - 39,909,449 (-)NCBIUU_Cfam_GSD_1.0
Baiap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,152,671 - 104,166,942 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366942,543,195 - 2,556,540 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366942,542,521 - 2,556,540 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BAIAP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl340,537,399 - 40,550,471 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1340,536,557 - 40,550,508 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2341,973,049 - 41,986,996 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Baiap3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249132,045,721 - 2,060,092 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249132,045,702 - 2,060,092 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Sequence


Ensembl Acc Id: ENSCSAT00000009850   ⟹   ENSCSAP00000007957
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl51,227,910 - 1,236,898 (+)Ensembl
RefSeq Acc Id: XM_007981271   ⟹   XP_007979462
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.151,222,994 - 1,237,823 (+)NCBI
Vero_WHO_p1.0NW_02366606829,845,977 - 29,861,169 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007981277   ⟹   XP_007979468
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.151,226,803 - 1,237,823 (+)NCBI
Vero_WHO_p1.0NW_02366606829,845,977 - 29,857,316 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007981294   ⟹   XP_007979485
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.151,223,975 - 1,237,823 (+)NCBI
Vero_WHO_p1.0NW_02366606829,845,977 - 29,861,006 (-)NCBI
Sequence:
RefSeq Acc Id: XM_037990055   ⟹   XP_037845983
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,845,977 - 29,860,113 (-)NCBI
RefSeq Acc Id: XM_037990056   ⟹   XP_037845984
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,845,977 - 29,860,113 (-)NCBI
RefSeq Acc Id: XM_037990057   ⟹   XP_037845985
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,845,977 - 29,857,316 (-)NCBI
RefSeq Acc Id: XR_005237771
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,845,977 - 29,860,113 (-)NCBI
RefSeq Acc Id: XR_005237772
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,845,977 - 29,860,113 (-)NCBI
RefSeq Acc Id: XP_007979462   ⟸   XM_007981271
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007979485   ⟸   XM_007981294
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007979468   ⟸   XM_007981277
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000007957   ⟸   ENSCSAT00000009850
RefSeq Acc Id: XP_037845984   ⟸   XM_037990056
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037845983   ⟸   XM_037990055
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037845985   ⟸   XM_037990057
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RH68 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000011761 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009850.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.357.50 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  MUN_dom UniProtKB/TrEMBL
  Munc13_1 UniProtKB/TrEMBL
  Munc13_dom-2 UniProtKB/TrEMBL
  UNC-13_domain UniProtKB/TrEMBL
NCBI Gene BAIAP3 ENTREZGENE
PANTHER BAI1-ASSOCIATED PROTEIN 3 UniProtKB/TrEMBL
  UNC-13-4A, ISOFORM B UniProtKB/TrEMBL
Pfam MUN UniProtKB/TrEMBL
  PF00168 UniProtKB/TrEMBL
PROSITE MHD1 UniProtKB/TrEMBL
  MHD2 UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
SMART SM00239 UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/TrEMBL
UniProt A0A0D9RH68 ENTREZGENE, UniProtKB/TrEMBL