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Gene: ZNF423 (zinc finger protein 423) Chlorocebus sabaeus

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Symbol:

ZNF423

Name:

zinc finger protein 423

RGD ID:

18674085

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); cilium assembly (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cerebellar disease (ortholog); Chromosome 16q12 Duplication Syndrome (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	35,281,679 - 35,657,045 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	35,278,652 - 35,621,956 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	40,921,545 - 41,224,662 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

cerebellar disease (ISO)

Chromosome 16q12 Duplication Syndrome (ISO)

chronic kidney disease (ISO)

Dandy-Walker syndrome (ISO)

nephronophthisis 14 (ISO)

Townes-Brocks syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

brown fat cell differentiation (IEA)

cerebellar granule cell precursor proliferation (IEA,ISO)

cilium assembly (IEA,ISO)

negative regulation of cold-induced thermogenesis (IEA)

negative regulation of DNA-templated transcription (IEA,ISO)

Notch signaling pathway (IEA)

positive regulation of BMP signaling pathway (IEA)

positive regulation of DNA-templated transcription (IEA)

protein localization to cilium (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

smoothened signaling pathway (IEA,ISO)

white fat cell differentiation (IEA)

Cellular Component

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

identical protein binding (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

sequence-specific DNA binding (IEA,ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ZNF423
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	35,281,679 - 35,657,045 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	35,278,652 - 35,621,956 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	40,921,545 - 41,224,662 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ZNF423
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	49,487,524 - 49,859,279 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	49,487,524 - 49,857,919 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	49,521,435 - 49,891,830 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	48,082,022 - 48,418,419 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	48,082,022 - 48,418,419	NCBI
Celera	16	34,037,933 - 34,374,016 (-)	NCBI		Celera
Cytogenetic Map	16	q12.1	NCBI
HuRef	16	35,413,949 - 35,779,476 (-)	NCBI		HuRef
CHM1_1	16	50,931,825 - 51,299,125 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	55,285,346 - 55,656,988 (-)	NCBI		T2T-CHM13v2.0

Zfp423
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	88,388,438 - 88,688,665 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	88,388,438 - 88,686,223 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	87,661,810 - 87,962,053 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	87,661,810 - 87,959,595 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	90,185,709 - 90,483,494 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	90,551,915 - 90,849,700 (-)	NCBI		MGSCv36	mm8
Celera	8	91,927,923 - 92,193,957 (-)	NCBI		Celera
Cytogenetic Map	8	C3	NCBI
cM Map	8	42.29	NCBI

Zfp423
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	35,282,149 - 35,580,775 (+)	NCBI		GRCr8
mRatBN7.2	19	19,111,213 - 19,407,373 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	19,110,238 - 19,407,373 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	20,790,704 - 21,086,843 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	25,985,352 - 26,281,344 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	28,949,192 - 29,245,348 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	20,147,201 - 20,405,999 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	20,147,037 - 20,406,003 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	31,166,356 - 31,417,977 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	20,475,864 - 20,739,236 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	20,443,834 - 20,744,062 (+)	NCBI
Celera	19	19,045,848 - 19,288,099 (+)	NCBI		Celera
Cytogenetic Map	19	p11	NCBI

Znf423
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955433	7,700,734 - 8,009,451 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955433	7,700,965 - 8,018,437 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF423
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	58,945,567 - 59,311,916 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	64,850,814 - 65,217,052 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	29,748,405 - 30,118,999 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	48,635,379 - 48,969,776 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	48,639,118 - 48,969,727 (-)	Ensembl	panpan1.1		panPan2

ZNF423
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	65,512,342 - 65,778,410 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	65,438,842 - 65,778,407 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	62,021,969 - 62,355,695 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	65,995,487 - 66,329,228 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	65,987,645 - 66,329,218 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	62,818,056 - 63,152,768 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	63,837,882 - 64,171,956 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	64,726,999 - 65,060,818 (+)	NCBI		UU_Cfam_GSD_1.0

Znf423
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	56,632,360 - 56,889,357 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	2,699,702 - 3,010,912 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	2,699,722 - 2,956,734 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF423
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	34,932,597 - 35,299,688 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	34,929,286 - 35,299,695 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	30,708,117 - 31,005,158 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Znf423
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624757	6,742,132 - 7,061,058 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624757	6,742,289 - 7,060,907 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	17	33	33	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007992714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007992773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038008513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038008514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000003438 ⟹ ENSCSAP00000001714

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	35,278,652 - 35,621,956 (-)	Ensembl

RefSeq Acc Id:

XM_007992764 ⟹ XP_007990955

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	35,281,679 - 35,463,835 (-)	NCBI
Vero_WHO_p1.0	NW_023666047	41,046,776 - 41,221,617 (+)	NCBI

Sequence:

show sequence

CGAGAGAGACCCTTTGCTCCCTCTCCGTGATCCTCCCTTTAACCCCAGTCTCAGCGCCAGGCCC
TGGCATGGCGCCGGCCTCAGGCCCTCCTCCGTGTCTGTAGAATCTCAGAGCTGGCAGGGGGGCC
AGAACTCCCCGGTCGCCCCCGGGGCCTGGATCCCTCAACTGGGTCAACATCTGGCCGCGTGGCC
TGAGCCCTGGGCCTCCTCTGTCCTCTCCCTCCCCATCTGTGCCTTTTCCCAGCCCCTTTTCTTC
CCCAAGGCCCTTCCTCTCCCGCTAGCTGGGTCCTCCGCCAAGCGCCGCCGCGGGAGCAGCACAC
CCTCGGCCCATCCTTCGCCGCCGGCCCAGGCGGGCGGGTGGGGATGCGTCCCGTGGCTGAGATC
ACCAGTGGGCCGGTGGGAAGCGCCTCTCCAGCCCTCGCCTGCCCTGCCGCCGGGTCCTGGGAAC
CCGGGCTCAGGTTCTGGCCCTCTTGGCATCGGCCAGCTTGCCCTGGGATGCCCTGGTGAGCAGG
CGGAGAGATGGTGATGACGACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATG
TTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGGAAGGGGG
CACGGGCCTGCCGTACCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCCTGAGCTACTTGAAG
AGGCACGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTGTACCTACTGCAGCCGCCTCTTCA
AGCACAAGAGGAGCCGCGACCGGCACATCAAGCTGCATACGGGCGACAAGAAGTACCACTGCCA
CGAGTGCGAGGCAGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGACCCACAGCTCC
AGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGTGGCTTCTCCTCCACCAGCTCGCTGCAGAGCC
ACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCAGAGAAGGAAGCCAAGAAGGA
CGACTTCATGTGCGACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGAGAAGCACGTG
CTCACCCGCCACCCACAGCTGTCCGAGAAGGCGGACCTGCAGTGTATCCACTGCCCCGAGGTCT
TCGTCGACGAGAACACGCTGCTCACCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTG
CCCCATGTGCCCTGAGCAGTTCTCCTCGGTGGAAGGTGTCTACTGCCACCTGGACAGCCACCGG
CAGCCCGACTCCAGCAACCACAGCGTCAGTCCCGACCCCGTACTGGGCAGCGTGGCCTCCATGA
GTAGCGCCACGCCTGACTCCAGCGCTTCTGTGGAGCGCGGCTCCACACCGGACTCCACCTTGAA
GCCGCTGCGGGGGCAGAAGAAGTTGCGGGATGACGGGCAGGGCTGGACCAAGGTGGTCTATAGC
TGCCCCTATTGTTCCAAGCGGGACTTTAACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCA
TCCACGCAGACAAGCCCCAGCAGAGCCACACGTGTCAGATCTGCCTGGACTCCATGCCCACCCT
CTATAACCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCACGCCTACCCCATGATGCAGTTT
GGCAACATCTCCGCCTTCCACTGCAACTACTGCCCCGAGATGTTCGCCGACATCAATAGCCTGC
AGGAGCACATCCGTGTCTCCCACTGCGGCCCCAATACCAACCCCTCCGACGGCAATAACGCCTT
CTTCTGCAACCAGTGCTCCATGGGTTTCCTCACTGAGTCCTCCCTCACTGAGCACATCCAGCAG
GCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCA
TGGAGGTCTATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTGGCTCCATCCTGAAGCTCAC
CAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCTGAG
CAGAGCCCAGTCTCATCCGACGTGGAAGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCG
CCAACTCCATCTCCAATGGCGAGTATCCTTGCAATCAGTGCGACCTCAAGTTCTCCAACTTTGA
GAGCTTCCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCTGCGGAAGCAGGCGTGCCCCCAG
TGCAAAGAGGACTTTGACTCCCAGGAGTCCCTCCTGCAGCACCTGACGGTGCATTATATGACCA
CGTCGACCCACTATGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGATGACCTGCAGAA
GCACCTGCTGGACATGCACACCTTCGTGCTGTATCACTGTACCCTGTGTCAGGAGGTCTTCGAC
TCCAAGGTGTCTATCCAGGTGCACTTGGCAGTGAAGCACAGCAATGAGAAGAAGATGTACCGCT
GCACGGCCTGCAACTGGGACTTCCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA
CCTGGGCAACCCAGCCAAGGCTCACAAGTGCATCTTCTGTGGGGAGACCTTCAGCACCGAGGTG
GAGCTGCAGTGCCACATCACCACACACAGCAAGAAGTATAACTGCAAATTCTGCAGCAAGGCCT
TTCACGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGCTGCAAC
TGAGAACGGCACGGCCAACGGGGTGCCCCCCACGGCCACCAAGAAAGCTGAGCCTGCTGACCTG
CAGGGCATGCTGCTTAAGAACCCTGAGGCGCCTAACAGCCACGAGGCCAGCGAGGATGACGTGG
ACGCATCGGAGCCCATGTACGGCTGCGACATCTGTGGGGCGGCCTACACCATGGAGGTGCTGCT
GCAGAACCACCGGCTGCGGGACCACAACATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAG
GCTGAGTTTATCAAGGGCAGCCACAAATGCAACGTTTGCTCACGGACTTTCTTCTCGGAGAACG
GGCTACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAAGCACTACATGTGTCCCATCTGTGG
TGAGCGTTTCCCTTCGCTGCTGACGCTCACTGAGCACAAGGTGACCCACAGCAAGAGCCTGGAC
ACGGGCACCTGTCGCATCTGCAAGATGCCCCTACAGAGCGAGGAGGAGTTTATTGAGCACTGCC
AGATGCACCCCGACCTGCGCAACTCGCTCACGGGCTTCCGCTGTGTGGTCTGCATGCAGACAGT
CACCTCCACGCTCGAGCTCAAGATCCACGGCACCTTCCATATGCAGAAGCTGGCAGGCAGCTCG
GCGGCATCCTCCCCGAATGGCCAGGGACTGCAGAAGCTCTACAAGTGCGCCCTGTGCCTCAAGG
AGTTCCGCAGCAAGCAGGACCTGGTGAAGCTCGACGTCAATGGGCTGCCCTATGGCCTCTGCGC
CGGCTGCATGGCCCGCAGCGCCAATGGACAGGTGGGTGGCCTGGTCCCGCCCGAGCCCGCCGAC
CGGCCCTGTGCCGGCCTCCGCTGCCCCGAGTGCAGTGTCAAGTTCGAGAGTGCCGAAGACCTGG
AGAGCCACATGCAGGTGGACCATCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGCCAC
CCAGACGTCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAG
AACGAGAGAGAGATCCAAATCCATGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGT
GTAAGCTGTGCAACCAGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG
CTTCGAGGGCATGGGCGGCACCTTCAAATGCCCTGTGTGTTTCACAGTCTTTGTCCAGGCCAAC
AAGTTGCAGCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAAGATCTACGACTGCTCGCAGT
GCCCTCAGAAGTTCTTCTTCCAGACTGAGCTGCAGAACCACACGATGAGCCAGCACGCACAGTG
AGGGATCGCTCAACAGGACACCTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCAT
TTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTAAAACTCTAATGATTTGGCC
ATGAGGCGCTGCTATTATAAGCAGCTGGAAATGAATATTAATGGCAGAGATTAAAAGTATTCCA
TGCTCAGTATTTTTTATTGTCCTGCTACAGCTAGTGTGCTTTTAGAGTTTCCGCCGCAGACTAC
ATTTCTAGAGTTAGAGAAACCCGCTTTTTAAGGCTATTGTCCTTTGTTCCTTCATGTATTATAT
TGATAGTTTTTAAAAAAGAATTAGTGTGATTTTTTTTTTCTTTGCTTCTTTTTTTTCTTTCTTG
TTTTTCTTTCTCCCCCTTCGGTTAACTACTTTTTAATTGCAATTCTAGGTAATTGTGCATCGTG
ATGTGATTGCTTGGCTATTGTCTGAATATTTCCTTTTAATTTTTTAATTAAAGACTAATGCTTT
GATTGGATTTGCCAGTTCACCGGACAGTGATTAAAACTATGTAATGAATATAATCGGTTTCAGT
GCAACTGGATGGTCTGCTTTTAAATGTGACTTAATCTGACTGCAGTAACTAGTACAGTTCAATA
AAGGGAATCCATGCGATTAGCA

hide sequence

RefSeq Acc Id:

XM_007992773 ⟹ XP_007990964

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	35,281,679 - 35,462,510 (-)	NCBI
Vero_WHO_p1.0	NW_023666047	41,048,083 - 41,221,617 (+)	NCBI

Sequence:

show sequence

ACCAGGCTACCGAGATGGCAAACTTAGGTTCTGCAATTACACAGCGTTTCAGAAGCAAATTGAT
AGGATAACGTGTTATTATTGGCTACTGGGTTAATAGCTATTTTGGCAGGAGTACCAATCCTGCG
TGGTGTTGCTGGCGCAGGGTGTGAGAATGGCGCGATGGGGTGGAGAGGAATGGTGGGTGCGCGT
TGCACAGAGCTGCAGACTTGGGAGGACTCTGGGGGCCTCTTCTGCCAGCGCCTGCTTGGATAAT
GCTCAGTTCTGATTAGCTGTTGCCGAAACCAAGATCAGAGAGGTTGAGAGACCAGCGTCAGATC
ACACAATGGTGATGACGACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATGTT
GCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGGAAGGGGGCA
CGGGCCTGCCGTACCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCCTGAGCTACTTGAAGAG
GCACGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTGTACCTACTGCAGCCGCCTCTTCAAG
CACAAGAGGAGCCGCGACCGGCACATCAAGCTGCATACGGGCGACAAGAAGTACCACTGCCACG
AGTGCGAGGCAGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGACCCACAGCTCCAG
CAAGCCCTTCAAGTGCACTGTGTGCAAGCGTGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCAC
ATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCAGAGAAGGAAGCCAAGAAGGACG
ACTTCATGTGCGACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGAGAAGCACGTGCT
CACCCGCCACCCACAGCTGTCCGAGAAGGCGGACCTGCAGTGTATCCACTGCCCCGAGGTCTTC
GTCGACGAGAACACGCTGCTCACCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCC
CCATGTGCCCTGAGCAGTTCTCCTCGGTGGAAGGTGTCTACTGCCACCTGGACAGCCACCGGCA
GCCCGACTCCAGCAACCACAGCGTCAGTCCCGACCCCGTACTGGGCAGCGTGGCCTCCATGAGT
AGCGCCACGCCTGACTCCAGCGCTTCTGTGGAGCGCGGCTCCACACCGGACTCCACCTTGAAGC
CGCTGCGGGGGCAGAAGAAGTTGCGGGATGACGGGCAGGGCTGGACCAAGGTGGTCTATAGCTG
CCCCTATTGTTCCAAGCGGGACTTTAACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATC
CACGCAGACAAGCCCCAGCAGAGCCACACGTGTCAGATCTGCCTGGACTCCATGCCCACCCTCT
ATAACCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCACGCCTACCCCATGATGCAGTTTGG
CAACATCTCCGCCTTCCACTGCAACTACTGCCCCGAGATGTTCGCCGACATCAATAGCCTGCAG
GAGCACATCCGTGTCTCCCACTGCGGCCCCAATACCAACCCCTCCGACGGCAATAACGCCTTCT
TCTGCAACCAGTGCTCCATGGGTTTCCTCACTGAGTCCTCCCTCACTGAGCACATCCAGCAGGC
CCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCATG
GAGGTCTATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTGGCTCCATCCTGAAGCTCACCA
AGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCTGAGCA
GAGCCCAGTCTCATCCGACGTGGAAGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCC
AACTCCATCTCCAATGGCGAGTATCCTTGCAATCAGTGCGACCTCAAGTTCTCCAACTTTGAGA
GCTTCCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCTGCGGAAGCAGGCGTGCCCCCAGTG
CAAAGAGGACTTTGACTCCCAGGAGTCCCTCCTGCAGCACCTGACGGTGCATTATATGACCACG
TCGACCCACTATGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGATGACCTGCAGAAGC
ACCTGCTGGACATGCACACCTTCGTGCTGTATCACTGTACCCTGTGTCAGGAGGTCTTCGACTC
CAAGGTGTCTATCCAGGTGCACTTGGCAGTGAAGCACAGCAATGAGAAGAAGATGTACCGCTGC
ACGGCCTGCAACTGGGACTTCCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCACC
TGGGCAACCCAGCCAAGGCTCACAAGTGCATCTTCTGTGGGGAGACCTTCAGCACCGAGGTGGA
GCTGCAGTGCCACATCACCACACACAGCAAGAAGTATAACTGCAAATTCTGCAGCAAGGCCTTT
CACGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGCTGCAACTG
AGAACGGCACGGCCAACGGGGTGCCCCCCACGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCA
GGGCATGCTGCTTAAGAACCCTGAGGCGCCTAACAGCCACGAGGCCAGCGAGGATGACGTGGAC
GCATCGGAGCCCATGTACGGCTGCGACATCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC
AGAACCACCGGCTGCGGGACCACAACATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAGGC
TGAGTTTATCAAGGGCAGCCACAAATGCAACGTTTGCTCACGGACTTTCTTCTCGGAGAACGGG
CTACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAAGCACTACATGTGTCCCATCTGTGGTG
AGCGTTTCCCTTCGCTGCTGACGCTCACTGAGCACAAGGTGACCCACAGCAAGAGCCTGGACAC
GGGCACCTGTCGCATCTGCAAGATGCCCCTACAGAGCGAGGAGGAGTTTATTGAGCACTGCCAG
ATGCACCCCGACCTGCGCAACTCGCTCACGGGCTTCCGCTGTGTGGTCTGCATGCAGACAGTCA
CCTCCACGCTCGAGCTCAAGATCCACGGCACCTTCCATATGCAGAAGCTGGCAGGCAGCTCGGC
GGCATCCTCCCCGAATGGCCAGGGACTGCAGAAGCTCTACAAGTGCGCCCTGTGCCTCAAGGAG
TTCCGCAGCAAGCAGGACCTGGTGAAGCTCGACGTCAATGGGCTGCCCTATGGCCTCTGCGCCG
GCTGCATGGCCCGCAGCGCCAATGGACAGGTGGGTGGCCTGGTCCCGCCCGAGCCCGCCGACCG
GCCCTGTGCCGGCCTCCGCTGCCCCGAGTGCAGTGTCAAGTTCGAGAGTGCCGAAGACCTGGAG
AGCCACATGCAGGTGGACCATCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGCCACCC
AGACGTCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAA
CGAGAGAGAGATCCAAATCCATGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGTGT
AAGCTGTGCAACCAGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAGCT
TCGAGGGCATGGGCGGCACCTTCAAATGCCCTGTGTGTTTCACAGTCTTTGTCCAGGCCAACAA
GTTGCAGCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAAGATCTACGACTGCTCGCAGTGC
CCTCAGAAGTTCTTCTTCCAGACTGAGCTGCAGAACCACACGATGAGCCAGCACGCACAGTGAG
GGATCGCTCAACAGGACACCTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTT
GAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCAT
GAGGCGCTGCTATTATAAGCAGCTGGAAATGAATATTAATGGCAGAGATTAAAAGTATTCCATG
CTCAGTATTTTTTATTGTCCTGCTACAGCTAGTGTGCTTTTAGAGTTTCCGCCGCAGACTACAT
TTCTAGAGTTAGAGAAACCCGCTTTTTAAGGCTATTGTCCTTTGTTCCTTCATGTATTATATTG
ATAGTTTTTAAAAAAGAATTAGTGTGATTTTTTTTTTCTTTGCTTCTTTTTTTTCTTTCTTGTT
TTTCTTTCTCCCCCTTCGGTTAACTACTTTTTAATTGCAATTCTAGGTAATTGTGCATCGTGAT
GTGATTGCTTGGCTATTGTCTGAATATTTCCTTTTAATTTTTTAATTAAAGACTAATGCTTTGA
TTGGATTTGCCAGTTCACCGGACAGTGATTAAAACTATGTAATGAATATAATCGGTTTCAGTGC
AACTGGATGGTCTGCTTTTAAATGTGACTTAATCTGACTGCAGTAACTAGTACAGTTCAATAAA
GGGAATCCATGCGATTAGCA

hide sequence

RefSeq Acc Id:

XM_038008513 ⟹ XP_037864441

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666047	40,921,545 - 41,224,662 (+)	NCBI

RefSeq Acc Id:

XM_038008514 ⟹ XP_037864442

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666047	41,070,365 - 41,221,617 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007990955	(Get FASTA)	NCBI Sequence Viewer
	XP_007990964	(Get FASTA)	NCBI Sequence Viewer
	XP_037864441	(Get FASTA)	NCBI Sequence Viewer
	XP_037864442	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000001714.1

RefSeq Acc Id:	XP_007990955 ⟸ XM_007992764
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9QZC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007990964 ⟸ XM_007992773
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9QZC5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000001714 ⟸ ENSCSAT00000003438

RefSeq Acc Id:	XP_037864441 ⟸ XM_038008513
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9QZC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037864442 ⟸ XM_038008514
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9QZC5 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000005405	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000003438.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	ZnF_C2H2-type_TF	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	ZNF423	ENTREZGENE
PANTHER	TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 423	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0D9QZC5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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