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Gene: Ebf1 (EBF transcription factor 1) Rattus norvegicus
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Symbol: Ebf1
Name: EBF transcription factor 1
Description: Exhibits C2H2 zinc finger domain binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Orthologous to human EBF1 (EBF transcription factor 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: early B-cell factor (olfactory neuronal transcription factor 1); early B-cell factor 1; Ebf; o/E-1; OE-1; olf-1; Olf1; olfactory neuronal transcription factor; transcription factor COE1
Orthologs:
Homo sapiens (human) : EBF1 (EBF transcription factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Ebf1 (early B cell factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ebf1 (EBF transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : EBF1 (EBF transcription factor 1)
Canis lupus familiaris (dog) : EBF1 (EBF transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ebf1 (EBF transcription factor 1)
Sus scrofa (pig) : EBF1 (EBF transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01023,654,849 - 24,051,627 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01023,518,314 - 23,912,932 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41029,770,047 - 30,163,200 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11030,132,189 - 30,164,249 (+)NCBI
Celera1028,580,160 - 28,966,044 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ebf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620953
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.