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Gene: RXRB (retinoid X receptor beta) Chlorocebus sabaeus

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Symbol:

RXRB

Name:

retinoid X receptor beta

RGD ID:

18656546

Description:

ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear receptor activity (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 5 (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cytosol (inferred); nucleolus (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

retinoic acid receptor RXR-beta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RXRB (retinoid X receptor beta)	NCBI	Ortholog
Mus musculus (house mouse):	Rxrb (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rxrb (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rxrb (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RXRB (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RXRB (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rxrb (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RXRB (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rxrb (retinoid X receptor beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	38,874,467 - 38,881,527 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	38,874,681 - 38,881,653 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	33,027,908 - 33,034,945 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant intellectual developmental disorder 5 (ISO)

Breast Neoplasms (ISO)

Disease Progression (ISO)

MHC class I deficiency (ISO)

proteasome-associated autoinflammatory syndrome 1 (ISO)

Stomach Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cardiac muscle cell proliferation (ISO)

cellular response to retinoic acid (ISO)

in utero embryonic development (ISO)

intracellular receptor signaling pathway (IEA)

maternal placenta development (ISO)

nuclear receptor-mediated signaling pathway (ISO)

nuclear receptor-mediated steroid hormone signaling pathway (IEA)

positive regulation of DNA-templated transcription (IEA)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of DNA-templated transcription (IEA)

regulation of myelination (ISO)

ventricular cardiac muscle cell differentiation (ISO)

Cellular Component

cytosol (IEA)

nucleolus (IEA)

nucleoplasm (IEA)

nucleus (IEA)

RNA polymerase II transcription regulator complex (IEA)

Molecular Function

chromatin DNA binding (ISO)

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

nuclear receptor activity (IEA,ISO)

nuclear retinoic acid receptor binding (ISO)

nuclear steroid receptor activity (IEA)

nuclear thyroid hormone receptor binding (ISO)

nuclear vitamin D receptor binding (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

transcription cis-regulatory region binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

retinoic acid signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RXRB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	38,874,467 - 38,881,527 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	38,874,681 - 38,881,653 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	33,027,908 - 33,034,945 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

RXRB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	33,193,588 - 33,200,853 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	33,193,588 - 33,200,665 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	33,161,365 - 33,168,630 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	33,269,343 - 33,276,410 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	33,269,343 - 33,276,410	NCBI
Celera	6	34,715,731 - 34,722,798 (-)	NCBI		Celera
Cytogenetic Map	6	p21.32	NCBI
HuRef	6	32,903,933 - 32,910,518 (-)	NCBI		HuRef
CHM1_1	6	33,163,235 - 33,170,347 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	33,014,941 - 33,022,206 (-)	NCBI		T2T-CHM13v2.0

Rxrb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	34,250,786 - 34,257,377 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	34,250,786 - 34,257,373 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	34,031,812 - 34,038,403 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	34,031,812 - 34,038,399 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	34,168,797 - 34,175,344 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	33,642,306 - 33,648,853 (+)	NCBI		MGSCv36	mm8
Celera	17	36,777,982 - 36,784,532 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	17.98	NCBI

Rxrb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	4,818,707 - 4,824,968 (-)	NCBI		GRCr8
mRatBN7.2	20	4,816,813 - 4,823,267 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	4,816,815 - 4,828,773 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	5,568,399 - 5,574,352 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	4,930,151 - 4,936,106 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	5,411,249 - 5,417,188 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	3,822,673 - 3,829,138 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	3,823,042 - 3,829,140 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	5,901,997 - 5,908,469 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	4,954,336 - 4,960,880 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	4,955,307 - 4,960,928 (-)	NCBI
Celera	20	6,417,001 - 6,422,951 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Rxrb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	1,767,833 - 1,774,401 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	1,767,833 - 1,774,401 (-)	NCBI	ChiLan1.0	ChiLan1.0

RXRB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	47,671,456 - 47,678,303 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	43,543,098 - 43,549,972 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	32,765,818 - 32,772,876 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	33,880,758 - 33,887,887 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	33,880,758 - 33,887,820 (-)	Ensembl	panpan1.1		panPan2

RXRB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	2,657,058 - 2,663,648 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	2,657,792 - 2,663,706 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	2,738,197 - 2,744,918 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	2,987,789 - 2,994,513 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	2,987,789 - 2,994,459 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	2,655,982 - 2,662,701 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	2,737,356 - 2,744,070 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	2,811,921 - 2,818,640 (-)	NCBI		UU_Cfam_GSD_1.0

Rxrb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	38,297,888 - 38,305,050 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	25,655,209 - 25,662,416 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	25,655,164 - 25,662,369 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RXRB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	25,236,004 - 25,242,875 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	25,236,005 - 25,242,842 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	29,760,855 - 29,767,618 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rxrb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	23,606,955 - 23,613,508 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	23,607,046 - 23,613,399 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RXRB
82 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007972962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007972963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC241459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACDXN010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000007595 ⟹ ENSCSAP00000005768

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	17	38,874,681 - 38,881,653 (+)	Ensembl

RefSeq Acc Id:

XM_007972962 ⟹ XP_007971153

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	17	38,874,467 - 38,881,527 (+)	NCBI
Vero_WHO_p1.0	NW_023666044	33,027,908 - 33,034,945 (-)	NCBI

Sequence:

show sequence

GGGGGCGGGAACTCGCGCCGAGACTTCCCGTCTGTACAAAGATGGCTGCCACATTGGCGCTGTC
ATTTTGGTACAGAGCAGAGCGACGGGCTTAATTCTACCCAATCCAGGCCAGAGTCTTTCTCTCA
GGGGCTTCCTCGTGCTCAGCTACTCCTCCGATCAACCCCTGGGAATCCCTGGGAGGTTTTCGGT
ATCCCTACTCTCAGCCAGGGATATGTCTTGGGCCGCTCGCCCGCCCTTCCTCCCTCAGCGGCAT
GCCGCAGGGCAGTGTGGGCCGGTGGGGGTGCGAAAAGAAATGCATTGTGGGGTCGCGTCCCGGT
GGCGGCGGCGACGGCCCTGGCTGGATCCCGCAGCGGCGGCGGCGGCGGCGGTGGCAGGCGGAGA
ACAACAAACCCCGGAGCCGGAGCCGGGGGAGGCTGGACGGGACGGGATGGGCGACAGCGGGCGG
GACTCCCGAAGCCCAGACAGCTCCTCCCCAAATCCCCTTCCCCAGGGAGTCCCTCCCCCTTCTC
CTCCTGGACCACCCCTAACCCCTTCAACAGCTCCATCCCTTGGAGGCTCTGGGGCCCCACCCCC
ACCTCCGATGCCACCCCCGCCACTGGGCTCTCCCTTTCCAGTCATCAGTTCTTCCATGGGGTCC
CCTGGTCTGCCCCCTCCAGCTCCCCCAGGATTCTCCGGGCCTGTCAGCAGCCCCCAGATTAACT
CAACAGTGTCACTCCCTGGGGGTGGGTCTGGCCCCCCTGAAGACGTGAAGCCACCAGTCTTAGG
GGTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGCCCTGGGGCTGGCAAACGGCTATGTGCA
ATCTGCGGGGACAGAAGCTCAGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGCT
TCTTCAAACGCACCATCCGCAAGGACCTTACATACTCTTGCCGGGACAACAAAGACTGCACAGT
GGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTATCAGAAGTGCCTGGCCACTGGCATG
AAGAGGGAGGCGGTACAGGAGGAGCGTCAGCGGGGAAAGGACAAGGATGGGGATGGGGAGGGGG
CTGGGGGAGCCCCCGAGGAGATGCCTGTGGACAGGATCCTGGAGGCAGAGCTTGCTGTGGAGCA
GAAGAGTGACCAGGGCGTTGAGGGTCCTGGGGGAACCGGGGGTAGCGGCAGCAGCCCAAATGAC
CCCGTGACTAACATCTGTCAGGCAGCTGACAAACAGCTATTCACGCTTGTTGAGTGGGCGAAGA
GGATCCCACACTTTTCCTCCTTGCCTCTGGATGATCAGGTCATATTGCTGCGGGCAGGCTGGAA
TGAGCTCCTCATTGCCTCCTTCTCCCACCGATCCATTGATGTTCGAGATGGCATCCTCCTTGCC
ACAGGTCTTCATGTGCACCGCAACTCAGCCCATTCGGCAGGAGTAGGAGCCATCTTTGATCGGT
CCCTCTCCAGGGTGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAGGATGGACAAGACAGA
GCTTGGCTGCCTGAGGGCAATCATTCTGTTTAATCCAGATGCCAAGGGCCTCTCCAACCCTAGT
GAGGTGGAGGTCCTGCGGGAGAAAGTGTATGCATCACTGGAGACCTACTGCAAACAGAAGTACC
CTGAGCAGCAGGGACGGTTTGCCAAGCTGCTGCTACGTCTTCCTGCCCTCCGGTCCATTGGCCT
TAAGTGTCTAGAGCATCTGTTTTTCTTCAAGCTCATTGGTGACACCCCCATCGACACCTTTCTC
ATGGAGATGCTTGAGGCTCCCCATCAACTGGCCTGAGCTCAGACCCTGACGTGGTGCTTCTCAC
ACTGGAGGAGCACACATCCGAGAGGGACTCCAAGCCCTGGGGCAGGGTGGGGGGCCATGTTCCC
AGAACCTTGATGGGGTGAGAAGTACAGGGCAGAACCAAGAACATAAACCCTCCAAGGGATCTGC
TTGATATCCCAAGTTGGAAGGGACCCCAGATCCCTGTGAAGACTGGTTGTGTCCCTTCAGTGGC
CTTGAGTCTCTGAATTTGTCGGGGTCTCCCGTGATTTGGGGTGATTTCTCACCCTCTGTCCTTC
CCCCAGCACAAAGCACTGGCCCTGCCTCCAGGACCTTGCTTCCTTCTCATCTTGCCTCATTTTG
CTTCCCATCTGAAGAGTGGAAATGGGGAACTCCCCCAGAGGTGGATATTGGGGGGCAGGCCCCC
CAAACTGATGGACATGAGAGTAGGGCCTGACAGGCCTTCCTCTTCTCAAACCTGGCAGATGGGG
GCCTCTCTGGAAGAGGGAGGGGCCCTGTTACTGTCCAGAGTCTCTTTTTACACTTCACCTCCTT
CTGCAGTCAGACTGAAATATAAAAAAGGTGGTGGTGGTGGTGAAGGGGCTGGTGGAGATGTATG
AACCTATCTGCTATTTTTAATTTCCTCTGAGGATAGAGACTTGCAGTTAGACTCAAAGAAGTAC
TGTACTTTCCCAGGTTGACTAAGAAATGCCAGTGGTGGAGGTGGGTGTTTGGGAAAGGCAGGGC
CCTGAAATGGCCTGTCTCTAGGGCTCTCCAAGCACTAGCCTTCCCAGCTTTCCTCCTCCCCATC
TCTTCCTGTCTAACTTGGGGAAGGGGCCTGGGCTGTGAGGACAGGGCCCCCACAGGGGATGTTT
TCCTGAGTGTAGTCCCGGAGGCCTTCCCTTCACTGCTCTCCTCCAGCCCTGGGCACATAGTATA
GGCTGGGGACACAGGAGCCTGGCCTGAGAATTGAGGGGAGGTGGCCAGCCCGCAGAGGTGGGGT
GCCGGGGCTGCATGATTTTTGCCCTGCGTCCTTTCTCTTTGGGGCTCCTTTCCCCTCTCACTCA
TACATAAAATCGCTTTCAAATTAAAATCGCTGTTTTCTGGA

hide sequence

RefSeq Acc Id:

XM_007972963 ⟹ XP_007971154

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	17	38,874,467 - 38,881,527 (+)	NCBI
Vero_WHO_p1.0	NW_023666044	33,027,908 - 33,034,945 (-)	NCBI

Sequence:

show sequence

GGGGGCGGGAACTCGCGCCGAGACTTCCCGTCTGTACAAAGATGGCTGCCACATTGGCGCTGTC
ATTTTGGTACAGAGCAGAGCGACGGGCTTAATTCTACCCAATCCAGGCCAGAGTCTTTCTCTCA
GGGGCTTCCTCGTGCTCAGCTACTCCTCCGATCAACCCCTGGGAATCCCTGGGAGGTTTTCGGT
ATCCCTACTCTCAGCCAGGGATATGTCTTGGGCCGCTCGCCCGCCCTTCCTCCCTCAGCGGCAT
GCCGCAGGGCAGTGTGGGCCGGTGGGGGTGCGAAAAGAAATGCATTGTGGGGTCGCGTCCCGGT
GGCGGCGGCGACGGCCCTGGCTGGATCCCGCAGCGGCGGCGGCGGCGGCGGTGGCAGGCGGAGA
ACAACAAACCCCGGAGCCGGAGCCGGGGGAGGCTGGACGGGACGGGATGGGCGACAGCGGGCGG
GACTCCCGAAGCCCAGACAGCTCCTCCCCAAATCCCCTTCCCCAGGGAGTCCCTCCCCCTTCTC
CTCCTGGACCACCCCTAACCCCTTCAACAGCTCCATCCCTTGGAGGCTCTGGGGCCCCACCCCC
ACCTCCGATGCCACCCCCGCCACTGGGCTCTCCCTTTCCAGTCATCAGTTCTTCCATGGGGTCC
CCTGGTCTGCCCCCTCCAGCTCCCCCAGGATTCTCCGGGCCTGTCAGCAGCCCCCAGATTAACT
CAACAGTGTCACTCCCTGGGGGTGGGTCTGGCCCCCCTGAAGACGTGAAGCCACCAGTCTTAGG
GGTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGCCCTGGGGCTGGCAAACGGCTATGTGCA
ATCTGCGGGGACAGAAGCTCAGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGCT
TCTTCAAACGCACCATCCGCAAGGACCTTACATACTCTTGCCGGGACAACAAAGACTGCACAGT
GGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTATCAGAAGTGCCTGGCCACTGGCATG
AAGAGGGAGGCGGTACAGGAGGAGCGTCAGCGGGGAAAGGACAAGGATGGGGATGGGGAGGGGG
CTGGGGGAGCCCCCGAGGAGATGCCTGTGGACAGGATCCTGGAGGCAGAGCTTGCTGTGGAGCA
GAAGAGTGACCAGGGCGTTGAGGGTCCTGGGGGAACCGGGGGTAGCGGCAGCAGCCCAAATGAC
CCCGTGACTAACATCTGTCAGGCAGCTGACAAACAGCTATTCACGCTTGTTGAGTGGGCGAAGA
GGATCCCACACTTTTCCTCCTTGCCTCTGGATGATCAGGTCATATTGCTGCGGGCAGGCTGGAA
TGAGCTCCTCATTGCCTCCTTCTCCCACCGATCCATTGATGTTCGAGATGGCATCCTCCTTGCC
ACAGGTCTTCATGTGCACCGCAACTCAGCCCATTCGGCAGGAGTAGGAGCCATCTTTGATCGGG
TGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAGGATGGACAAGACAGAGCTTGGCTGCCT
GAGGGCAATCATTCTGTTTAATCCAGATGCCAAGGGCCTCTCCAACCCTAGTGAGGTGGAGGTC
CTGCGGGAGAAAGTGTATGCATCACTGGAGACCTACTGCAAACAGAAGTACCCTGAGCAGCAGG
GACGGTTTGCCAAGCTGCTGCTACGTCTTCCTGCCCTCCGGTCCATTGGCCTTAAGTGTCTAGA
GCATCTGTTTTTCTTCAAGCTCATTGGTGACACCCCCATCGACACCTTTCTCATGGAGATGCTT
GAGGCTCCCCATCAACTGGCCTGAGCTCAGACCCTGACGTGGTGCTTCTCACACTGGAGGAGCA
CACATCCGAGAGGGACTCCAAGCCCTGGGGCAGGGTGGGGGGCCATGTTCCCAGAACCTTGATG
GGGTGAGAAGTACAGGGCAGAACCAAGAACATAAACCCTCCAAGGGATCTGCTTGATATCCCAA
GTTGGAAGGGACCCCAGATCCCTGTGAAGACTGGTTGTGTCCCTTCAGTGGCCTTGAGTCTCTG
AATTTGTCGGGGTCTCCCGTGATTTGGGGTGATTTCTCACCCTCTGTCCTTCCCCCAGCACAAA
GCACTGGCCCTGCCTCCAGGACCTTGCTTCCTTCTCATCTTGCCTCATTTTGCTTCCCATCTGA
AGAGTGGAAATGGGGAACTCCCCCAGAGGTGGATATTGGGGGGCAGGCCCCCCAAACTGATGGA
CATGAGAGTAGGGCCTGACAGGCCTTCCTCTTCTCAAACCTGGCAGATGGGGGCCTCTCTGGAA
GAGGGAGGGGCCCTGTTACTGTCCAGAGTCTCTTTTTACACTTCACCTCCTTCTGCAGTCAGAC
TGAAATATAAAAAAGGTGGTGGTGGTGGTGAAGGGGCTGGTGGAGATGTATGAACCTATCTGCT
ATTTTTAATTTCCTCTGAGGATAGAGACTTGCAGTTAGACTCAAAGAAGTACTGTACTTTCCCA
GGTTGACTAAGAAATGCCAGTGGTGGAGGTGGGTGTTTGGGAAAGGCAGGGCCCTGAAATGGCC
TGTCTCTAGGGCTCTCCAAGCACTAGCCTTCCCAGCTTTCCTCCTCCCCATCTCTTCCTGTCTA
ACTTGGGGAAGGGGCCTGGGCTGTGAGGACAGGGCCCCCACAGGGGATGTTTTCCTGAGTGTAG
TCCCGGAGGCCTTCCCTTCACTGCTCTCCTCCAGCCCTGGGCACATAGTATAGGCTGGGGACAC
AGGAGCCTGGCCTGAGAATTGAGGGGAGGTGGCCAGCCCGCAGAGGTGGGGTGCCGGGGCTGCA
TGATTTTTGCCCTGCGTCCTTTCTCTTTGGGGCTCCTTTCCCCTCTCACTCATACATAAAATCG
CTTTCAAATTAAAATCGCTGTTTTCTGGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007971153	(Get FASTA)	NCBI Sequence Viewer
	XP_007971154	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005768
	ENSCSAP00000005768.1

RefSeq Acc Id:	XP_007971153 ⟸ XM_007972962
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007971154 ⟸ XM_007972963
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RAX9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000005768 ⟸ ENSCSAT00000007595

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009510	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007595.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.565.10	UniProtKB/TrEMBL
	3.30.50.10	UniProtKB/TrEMBL
InterPro	NHR-like_dom_sf	UniProtKB/TrEMBL
	Nucl_hrmn_rcpt_lig-bd	UniProtKB/TrEMBL
	Nuclear_hormone_rcpt_NR2	UniProtKB/TrEMBL
	Nuclear_hrmn_rcpt	UniProtKB/TrEMBL
	Retinoid-X_rcpt/HNF4	UniProtKB/TrEMBL
	Znf_hrmn_rcpt	UniProtKB/TrEMBL
	Znf_NHR/GATA	UniProtKB/TrEMBL
NCBI Gene	RXRB	ENTREZGENE
PANTHER	NUCLEAR HORMONE RECEPTOR	UniProtKB/TrEMBL
Pfam	Hormone_recep	UniProtKB/TrEMBL
	zf-C4	UniProtKB/TrEMBL
PRINTS	RETINOIDXR	UniProtKB/TrEMBL
	STRDHORMONER	UniProtKB/TrEMBL
	STROIDFINGER	UniProtKB/TrEMBL
PROSITE	NR_LBD	UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_1	UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_2	UniProtKB/TrEMBL
SMART	HOLI	UniProtKB/TrEMBL
	ZnF_C4	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
	SSF48508	UniProtKB/TrEMBL
UniProt	A0A0D9RAX9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations