TEX10 (testis expressed 10) - Rat Genome Database

Name: TEX10
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TEX10 (testis expressed 10) Chlorocebus sabaeus

Analyze

Symbol:

TEX10

Name:

testis expressed 10

RGD ID:

18656488

Description:

INVOLVED IN rRNA processing (inferred); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (inferred); intracellular organelle (inferred); mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

testis-expressed protein 10; testis-expressed sequence 10 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TEX10 (testis expressed 10)	NCBI	Ortholog
Mus musculus (house mouse):	Tex10 (testis expressed gene 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tex10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tex10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TEX10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TEX10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tex10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TEX10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tex10 (testis expressed 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	39,087,506 - 39,138,134 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	39,091,085 - 39,138,027 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,710 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

rRNA processing (IEA)

Cellular Component

cytoplasm (IEA)

intracellular organelle (IEA)

mitochondrion (IEA)

MLL1 complex (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TEX10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	39,087,506 - 39,138,134 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	39,091,085 - 39,138,027 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,710 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

TEX10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	100,302,084 - 100,352,942 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	100,302,077 - 100,352,942 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	103,064,366 - 103,115,224 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	102,104,190 - 102,154,995 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	100,143,923 - 100,194,729	NCBI
Celera	9	73,577,686 - 73,628,526 (-)	NCBI		Celera
Cytogenetic Map	9	q31.1	NCBI
HuRef	9	72,663,398 - 72,714,298 (-)	NCBI		HuRef
CHM1_1	9	103,210,798 - 103,261,707 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	112,473,720 - 112,524,578 (-)	NCBI		T2T-CHM13v2.0

Tex10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	48,430,805 - 48,473,492 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	48,430,858 - 48,473,459 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	48,430,858 - 48,473,464 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	48,430,858 - 48,473,459 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	48,443,828 - 48,486,294 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	48,443,828 - 48,486,294 (-)	NCBI		MGSCv36	mm8
Celera	4	48,454,349 - 48,496,904 (-)	NCBI		Celera
Cytogenetic Map	4	B1	NCBI
cM Map	4	26.13	NCBI

Tex10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	67,557,770 - 67,603,904 (-)	NCBI		GRCr8
mRatBN7.2	5	62,762,230 - 62,808,373 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	62,762,230 - 62,808,373 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	64,739,864 - 64,786,013 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	66,559,162 - 66,605,312 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	66,528,626 - 66,574,780 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	64,179,247 - 64,225,844 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	64,179,247 - 64,225,844 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	68,695,431 - 68,742,028 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	65,118,575 - 65,165,336 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	65,124,068 - 65,160,400 (-)	NCBI
Celera	5	64,785,782 - 64,831,794 (+)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

Tex10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	25,381,751 - 25,447,985 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	25,382,222 - 25,445,492 (+)	NCBI	ChiLan1.0	ChiLan1.0

TEX10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	39,100,927 - 39,151,881 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	39,103,298 - 39,154,252 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	71,394,926 - 71,445,750 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	99,509,642 - 99,560,447 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	99,509,648 - 99,560,447 (-)	Ensembl	panpan1.1		panPan2

TEX10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	57,196,683 - 57,255,847 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	57,196,683 - 57,255,849 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	55,640,283 - 55,704,098 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	58,317,999 - 58,381,832 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	58,318,006 - 58,381,825 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	56,821,883 - 56,885,904 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	56,846,847 - 56,910,846 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	57,546,505 - 57,610,510 (-)	NCBI		UU_Cfam_GSD_1.0

Tex10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	172,065,343 - 172,108,948 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	8,611,075 - 8,656,545 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	8,612,919 - 8,656,545 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TEX10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	242,058,041 - 242,120,554 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	242,058,035 - 242,120,547 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	270,407,894 - 270,480,569 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Tex10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624825	640,971 - 701,039 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624825	640,952 - 701,046 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	14	48
Low		6	12
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007968575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037982831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000009238 ⟹ ENSCSAP00000007363

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	12	39,091,085 - 39,138,027 (+)	Ensembl

RefSeq Acc Id:

XM_007968575 ⟹ XP_007966766

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	39,087,546 - 39,138,134 (+)	NCBI
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,710 (-)	NCBI

Sequence:

show sequence

GCGGCGGAAGGAGACGCGGCCGCGTGAGGACGAGGCTATTTGAAAACACGCTCCAGGAGCCAGA
GTCTGAGGCCGCCGGCGCACGCTGTCGCCTTGTGGGCTTCTGCTCGCTCGCTTTCCCCTCGGGC
TCCGCGCCCCGGCCGCGGCCGGGTCCTCAGTAGTCGAGAATGACCAAAAAAAGAAAACGCCAAG
ATGATTTTCAAAAAGTAAAATTGAAAGTTGGTAAAAAGAAGCCCAAGTTACAAAATGCTACTCC
TACAAACTTTAAAACAAAGACTATACATCTGCCTGAGCAACTCAAAGAAGATGGAACACTTCCA
ACAAACAATAGAAAACTTAACATAAAGGATTTGCTGTCACAGATGCATCACTACAATGCTGGGG
TTAAACAAAGTGCTCTTCTTGGACTTAAAGACCTTTTGTCTCAATACCCATTTATAATTGATGC
ACACCTTTCAAACATATTAAGTGAAGTGACTGCTGTGTTTACAGATAAAGATGCTAATGTACGA
TTAGCAGCAGTTCAACTTCTTCAATTCCTGGCCCCCAAAATACGAGCTGAACAAATTTCTCCAT
TTTTTCCTTTGGTAAGTGCCCATCTCTCTAGTGCCATGACTCACATTACTGAAGGAATTCAGGA
GGACTCTTTAAAAGTTTTGGACATTCTGCTGGAACAGTACCCAGCTCTAATTACTGGCCGTAGC
AGCATATTGCTTAAGAATTTTGTAGAACTTATTTCTCATCAGCAGCTGTCCAAAGGACTGATAA
CTAGAGACAGATCCCAGTCCTGGATACTTTCTGTAAATCCTAATCGGAGACTCACTTCTCAGCA
ATGGAGGCTGAAAGTCTTAGTGAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGT
AGGTTGAGAGAAAGTGAAGGACTTCAGGAACAGAAAGAAAATCCCCATGCCACTAGCAACTCCA
TTTTTATCAACTGGAAGGAACATGCCAACGACCAGCAACACATCCAGGTTTATGAAAATGGGGG
TTCACAGCCAAATGTCAGTTCACAGTTCAGGCTACGGTATCTGGTTGGAGGACTGAGTGGTGTG
GATGAAGGCCTATCATCTACTGAAAACCTGAAAGGATTTATTGAGATAATAATTCCTTTGCTAA
TTGAGTGCTGGGTTGAAGCTGTACCTCCACAACTAGCTACTCCTGTTGGAAATGGTATAGAACG
AGAACCTCTACAGGTTATGCAGCAAGTTCTTAATATTATTTCCCTTCTGTGGAAACTCTCTAAA
CAACAGGATGAAACCCATAAATTGGAATCATGGCTTCGAAAGAACTACCTTATTGATTTCAAAC
ACCATTTTATGAGTCGTTTTCCATATGCCTTAAAAGAAATAACCAAGCACAAAAGGAAAGAGCC
AAATAAAAGCATCAAGCATTGCACAGTTCTCTCCAATAACATAGATCATCTCTTACTGAATTTA
ACACTGTCTGATATCATGGTCTCCCTGGCAAATGCCTCAACTTTGCAGAAGGATTGCAGTTGGA
TAGAAATGATAAGGAAATTTGTAACAGAGACCCTTGAAGATGGCTCTAGGCTAAATAGTAAGCA
ACTGAACAGATTGCTGGGAGTATCCTGGAGGTTAATGCAAATACAACCAAACAGAGAGGACACA
GAGACTCTTATTAAGGCAGTTTATACATTATATCAGCAGAGGGGCCTTATCCTTCCAGTTCGGA
CTTTGTTATTGAAGTTTTTCAGTAAAATCTATCAGACAGAAGAACTGAGATCTTGTAGATTCAG
AATTACAAAGGTGTCTTTGGCCTTTCTAAGATACCGTAGTAAAGTGCTGTCCCGTTGGCTGGCT
GGTTTACCATTGCAACTTGCTCATCTTGGCTCCCGAAATCCTGAGCTTTCTACACAGCTTATTG
ATATCATTCATACGGCTGCAGCACGAGCAAATAAAGAATTACTAAAAAGTTTGCAAGCTACTGC
CCTCCGAATTTATGATCCACAAGAAGGTGCTGTGGTGGTTCTCCCTGCAGACTCTCAGCAGCGT
TTGGTTCAGCTTGTGTATTTCCTACCCAGTCTGCCTGCTGATCTGCTTTCTCGGTTAAGTCGTT
GCTGTATTATGGGAAGACTCAGTTCAAGTTTGGCTGCCATGCTTATCGGGATACTGCACATGAG
ATCATCATTTTCTGGGTGGAAGTATTCGGCTAAAGACTGGTTGATGAGTGATGTGGACTATTTC
AGCTTCTTATTTTCCACACTTACAGGGTTTTCGAAAGAGGAGGTGACTTGGCTTCAGAGCCTTC
GAGGAGTTCCTCATGTCATCCAGACACAGCTTTCCCCTGTGCTTCTCTACCTTACAGATTTGGA
TCAATTTTTACACCATTGGGATGTAACAGAGGCAGTTTTTCACAGTTTATTGGTTATTCCTGCC
CGAAGTCAGAACTTTGACATCCTGCAAAGTGCCATCAGTAAGCATTTGGTTGGGTTGACTGTAA
TTCCTGACAGCACGGCTGGCTGTGTTTTTGGTGTTATCTGTAAGCTTCTGGATCATACTTGTGT
AGTTAGTGAGACTCTGCTGCCATTTCTGGCTTCTTGTTGCTACAGTCTTCTTTATTTTCTGCTC
ACTATAGAGAAGGGGGAAGCAGAACATCTAAGAAAAAGGGACAAGCTGTGGGGGGTCTGTGTCT
CCATCCTGGCTCTCTTGCCTCGAGTCCTCAGGTTGATGCTGCAGAGCCTGCGGGTGAACAGAGT
TGGGCCTGAGGAGCTGCCTGTTGTGGGCCAGCTGCTTCGACTGCTGCTTCAGCATGCACCTCTC
AGGACTCATATGTTGACCAATGCGATCTTGGTGCAGCAGATCATCAAGAATATCACGACATTGA
AGAGTGGAAGTGTTCAGGAACAGTGGCTCACAGACTTACATTACTGCTTCAACGTGTATATCAC
TGGGCATCCCCAAGGGCCCAGCGCACTGGCTACAGTGTATTGAAGAGGCGGTGGTACCTCCTGT
TTGAAGTTGTTTATTCACGTCTATCTTATTTTGAAGAAAGACTGATGTAATAGATCTTTTGTCA
TTAAAGCTGAACTTTTAAAGAA

hide sequence

RefSeq Acc Id:

XM_007968576 ⟹ XP_007966767

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	39,087,546 - 39,138,134 (+)	NCBI
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,710 (-)	NCBI

Sequence:

show sequence

GCGGCGGAAGGAGACGCGGCCGCGTGAGGACGAGGCTATTTGAAAACACGCTCCAGGAGCCAGA
GTCTGAGGCCGCCGGCGCACGCTGTCGCCTTGTGGGCTTCTGCTCGCTCGCTTTCCCCTCGGGC
TCCGCGCCCCGGCCGCGGCCGGGTCCTCAGTCGAGAATGACCAAAAAAAGAAAACGCCAAGATG
ATTTTCAAAAAGTAAAATTGAAAGTTGGTAAAAAGAAGCCCAAGTTACAAAATGCTACTCCTAC
AAACTTTAAAACAAAGACTATACATCTGCCTGAGCAACTCAAAGAAGATGGAACACTTCCAACA
AACAATAGAAAACTTAACATAAAGGATTTGCTGTCACAGATGCATCACTACAATGCTGGGGTTA
AACAAAGTGCTCTTCTTGGACTTAAAGACCTTTTGTCTCAATACCCATTTATAATTGATGCACA
CCTTTCAAACATATTAAGTGAAGTGACTGCTGTGTTTACAGATAAAGATGCTAATGTACGATTA
GCAGCAGTTCAACTTCTTCAATTCCTGGCCCCCAAAATACGAGCTGAACAAATTTCTCCATTTT
TTCCTTTGGTAAGTGCCCATCTCTCTAGTGCCATGACTCACATTACTGAAGGAATTCAGGAGGA
CTCTTTAAAAGTTTTGGACATTCTGCTGGAACAGTACCCAGCTCTAATTACTGGCCGTAGCAGC
ATATTGCTTAAGAATTTTGTAGAACTTATTTCTCATCAGCAGCTGTCCAAAGGACTGATAACTA
GAGACAGATCCCAGTCCTGGATACTTTCTGTAAATCCTAATCGGAGACTCACTTCTCAGCAATG
GAGGCTGAAAGTCTTAGTGAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGTAGG
TTGAGAGAAAGTGAAGGACTTCAGGAACAGAAAGAAAATCCCCATGCCACTAGCAACTCCATTT
TTATCAACTGGAAGGAACATGCCAACGACCAGCAACACATCCAGGTTTATGAAAATGGGGGTTC
ACAGCCAAATGTCAGTTCACAGTTCAGGCTACGGTATCTGGTTGGAGGACTGAGTGGTGTGGAT
GAAGGCCTATCATCTACTGAAAACCTGAAAGGATTTATTGAGATAATAATTCCTTTGCTAATTG
AGTGCTGGGTTGAAGCTGTACCTCCACAACTAGCTACTCCTGTTGGAAATGGTATAGAACGAGA
ACCTCTACAGGTTATGCAGCAAGTTCTTAATATTATTTCCCTTCTGTGGAAACTCTCTAAACAA
CAGGATGAAACCCATAAATTGGAATCATGGCTTCGAAAGAACTACCTTATTGATTTCAAACACC
ATTTTATGAGTCGTTTTCCATATGCCTTAAAAGAAATAACCAAGCACAAAAGGAAAGAGCCAAA
TAAAAGCATCAAGCATTGCACAGTTCTCTCCAATAACATAGATCATCTCTTACTGAATTTAACA
CTGTCTGATATCATGGTCTCCCTGGCAAATGCCTCAACTTTGCAGAAGGATTGCAGTTGGATAG
AAATGATAAGGAAATTTGTAACAGAGACCCTTGAAGATGGCTCTAGGCTAAATAGTAAGCAACT
GAACAGATTGCTGGGAGTATCCTGGAGGTTAATGCAAATACAACCAAACAGAGAGGACACAGAG
ACTCTTATTAAGGCAGTTTATACATTATATCAGCAGAGGGGCCTTATCCTTCCAGTTCGGACTT
TGTTATTGAAGTTTTTCAGTAAAATCTATCAGACAGAAGAACTGAGATCTTGTAGATTCAGAAT
TACAAAGGTGTCTTTGGCCTTTCTAAGATACCGTAGTAAAGTGCTGTCCCGTTGGCTGGCTGGT
TTACCATTGCAACTTGCTCATCTTGGCTCCCGAAATCCTGAGCTTTCTACACAGCTTATTGATA
TCATTCATACGGCTGCAGCACGAGCAAATAAAGAATTACTAAAAAGTTTGCAAGCTACTGCCCT
CCGAATTTATGATCCACAAGAAGGTGCTGTGGTGGTTCTCCCTGCAGACTCTCAGCAGCGTTTG
GTTCAGCTTGTGTATTTCCTACCCAGTCTGCCTGCTGATCTGCTTTCTCGGTTAAGTCGTTGCT
GTATTATGGGAAGACTCAGTTCAAGTTTGGCTGCCATGCTTATCGGGATACTGCACATGAGATC
ATCATTTTCTGGGTGGAAGTATTCGGCTAAAGACTGGTTGATGAGTGATGTGGACTATTTCAGC
TTCTTATTTTCCACACTTACAGGGTTTTCGAAAGAGGAGGTGACTTGGCTTCAGAGCCTTCGAG
GAGTTCCTCATGTCATCCAGACACAGCTTTCCCCTGTGCTTCTCTACCTTACAGATTTGGATCA
ATTTTTACACCATTGGGATGTAACAGAGGCAGTTTTTCACAGTTTATTGGTTATTCCTGCCCGA
AGTCAGAACTTTGACATCCTGCAAAGTGCCATCAGTAAGCATTTGGTTGGGTTGACTGTAATTC
CTGACAGCACGGCTGGCTGTGTTTTTGGTGTTATCTGTAAGCTTCTGGATCATACTTGTGTAGT
TAGTGAGACTCTGCTGCCATTTCTGGCTTCTTGTTGCTACAGTCTTCTTTATTTTCTGCTCACT
ATAGAGAAGGGGGAAGCAGAACATCTAAGAAAAAGGGACAAGCTGTGGGGGGTCTGTGTCTCCA
TCCTGGCTCTCTTGCCTCGAGTCCTCAGGTTGATGCTGCAGAGCCTGCGGGTGAACAGAGTTGG
GCCTGAGGAGCTGCCTGTTGTGGGCCAGCTGCTTCGACTGCTGCTTCAGCATGCACCTCTCAGG
ACTCATATGTTGACCAATGCGATCTTGGTGCAGCAGATCATCAAGAATATCACGACATTGAAGA
GTGGAAGTGTTCAGGAACAGTGGCTCACAGACTTACATTACTGCTTCAACGTGTATATCACTGG
GCATCCCCAAGGGCCCAGCGCACTGGCTACAGTGTATTGAAGAGGCGGTGGTACCTCCTGTTTG
AAGTTGTTTATTCACGTCTATCTTATTTTGAAGAAAGACTGATGTAATAGATCTTTTGTCATTA
AAGCTGAACTTTTAAAGAA

hide sequence

RefSeq Acc Id:

XM_007968577 ⟹ XP_007966768

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	39,087,506 - 39,138,134 (+)	NCBI
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,710 (-)	NCBI

Sequence:

show sequence

CGTGAGCACAAGGGGGAGGGGGAGGGGCCCTGATTTCCGGGCGGCGGAAGGAGACGCGGCCGCG
TGAGGACGAGGCTATTTGAAAACACGCTCCAGGAGCCAGAGTCTGAGGCCGCCGGCGCACGCTG
TCGCCTTGTGGGCTTCTGCTCGCTCGCTTTCCCCTCGGGCTCCGCGCCCCGGCCGCGGCCGGGT
CCTCAGTAGTCGAGAATGACCAAAAAAAGAAAACGCCAAGATGATTTTCAAAAAGTAAAATTGA
AAGTTGGTAAAAAGAAGCCCAAGTTACAAAATGCTACTCCTACAAACTTTAAAACAAAGACTAT
ACATCTGCCTGAGCAACTCAAAGAAGATGGAACACTTCCAACAAACAATAGAAAACTTAACATA
AAGGATTTGCTGTCACAGATGCATCACTACAATGCTGGGGTTAAACAAAGTGCTCTTCTTGGAC
TTAAAGACCTTTTGTCTCAATACCCATTTATAATTGATGCACACCTTTCAAACATATTAAGTGA
AGTGACTGCTGTGTTTACAGATAAAGATGCTAATGTACGATTAGCAGCAGTTCAACTTCTTCAA
TTCCTGGCCCCCAAAATACGAGCTGAACAAATTTCTCCATTTTTTCCTTTGGTAAGTGCCCATC
TCTCTAGTGCCATGACTCACATTACTGAAGGAATTCAGGAGGACTCTTTAAAAGTTTTGGACAT
TCTGCTGGAACAGTACCCAGCTCTAATTACTGGCCGTAGCAGCATATTGCTTAAGAATTTTGTA
GAACTTATTTCTCATCAGCAGCTGTCCAAAGGACTGATAACTAGAGACAGATCCCAGTCCTGGA
TACTTTCTGTAAATCCTAATCGGAGACTCACTTCTCAGCAATGGAGGCTGAAAGTCTTAGTGAG
ACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGTAGGTTGAGAGAAAGTGAAGGACTT
CAGGAACAGAAAGAAAATCCCCATGCCACTAGCAACTCCATTTTTATCAACTGGAAGGAACATG
CCAACGACCAGCAACACATCCAGGTTTATGAAAATGGGGGTTCACAGCCAAATGTCAGTTCACA
GTTCAGGCTACGGTATCTGGTTGGAGGACTGAGTGGTGTGGATGAAGGCCTATCATCTACTGAA
AACCTGAAAGGATTTATTGAGATAATAATTCCTTTGCTAATTGAGTGCTGGGTTGAAGCTGTAC
CTCCACAACTAGCTACTCCTGTTGGAAATGGTATAGAACGAGAACCTCTACAGGTTATGCAGCA
AGTTCTTAATATTATTTCCCTTCTGTGGAAACTCTCTAAACAACAGGATGAAACCCATAAATTG
GAATCATGGCTTCGAAAGAACTACCTTATTGATTTCAAACACCATTTTATGAGTCGTTTTCCAT
ATGCCTTAAAAGAAATAACCAAGCACAAAAGGAAAGAGCCAAATAAAAGCATCAAGCATTGCAC
AGTTCTCTCCAATAACATAGATCATCTCTTACTGAATTTAACACTGTCTGATATCATGGTCTCC
CTGGCAAATGCCTCAACTTTGCAGAAGGATTGCAGTTGGATAGAAATGATAAGGAAATTTGTAA
CAGAGACCCTTGAAGATGGCTCTAGGCTAAATAGTAAGCAACTGAACAGATTGCTGGGAGTATC
CTGGAGGTTAATGCAAATACAACCAAACAGAGAGGACACAGAGACTCTTATTAAGGCAGTTTAT
ACATTATATCAGCAGAGGGGCCTTATCCTTCCAGTTCGGACTTTGTTATTGAAGTTTTTCAGTA
AAATCTATCAGACAGAAGAACTGAGATCTTGTAGATTCAGATACCGTAGTAAAGTGCTGTCCCG
TTGGCTGGCTGGTTTACCATTGCAACTTGCTCATCTTGGCTCCCGAAATCCTGAGCTTTCTACA
CAGCTTATTGATATCATTCATACGGCTGCAGCACGAGCAAATAAAGAATTACTAAAAAGTTTGC
AAGCTACTGCCCTCCGAATTTATGATCCACAAGAAGGTGCTGTGGTGGTTCTCCCTGCAGACTC
TCAGCAGCGTTTGGTTCAGCTTGTGTATTTCCTACCCAGTCTGCCTGCTGATCTGCTTTCTCGG
TTAAGTCGTTGCTGTATTATGGGAAGACTCAGTTCAAGTTTGGCTGCCATGCTTATCGGGATAC
TGCACATGAGATCATCATTTTCTGGGTGGAAGTATTCGGCTAAAGACTGGTTGATGAGTGATGT
GGACTATTTCAGCTTCTTATTTTCCACACTTACAGGGTTTTCGAAAGAGGAGGTGACTTGGCTT
CAGAGCCTTCGAGGAGTTCCTCATGTCATCCAGACACAGCTTTCCCCTGTGCTTCTCTACCTTA
CAGATTTGGATCAATTTTTACACCATTGGGATGTAACAGAGGCAGTTTTTCACAGTTTATTGGT
TATTCCTGCCCGAAGTCAGAACTTTGACATCCTGCAAAGTGCCATCAGTAAGCATTTGGTTGGG
TTGACTGTAATTCCTGACAGCACGGCTGGCTGTGTTTTTGGTGTTATCTGTAAGCTTCTGGATC
ATACTTGTGTAGTTAGTGAGACTCTGCTGCCATTTCTGGCTTCTTGTTGCTACAGTCTTCTTTA
TTTTCTGCTCACTATAGAGAAGGGGGAAGCAGAACATCTAAGAAAAAGGGACAAGCTGTGGGGG
GTCTGTGTCTCCATCCTGGCTCTCTTGCCTCGAGTCCTCAGGTTGATGCTGCAGAGCCTGCGGG
TGAACAGAGTTGGGCCTGAGGAGCTGCCTGTTGTGGGCCAGCTGCTTCGACTGCTGCTTCAGCA
TGCACCTCTCAGGACTCATATGTTGACCAATGCGATCTTGGTGCAGCAGATCATCAAGAATATC
ACGACATTGAAGAGTGGAAGTGTTCAGGAACAGTGGCTCACAGACTTACATTACTGCTTCAACG
TGTATATCACTGGGCATCCCCAAGGGCCCAGCGCACTGGCTACAGTGTATTGAAGAGGCGGTGG
TACCTCCTGTTTGAAGTTGTTTATTCACGTCTATCTTATTTTGAAGAAAGACTGATGTAATAGA
TCTTTTGTCATTAAAGCTGAACTTTTAAAGAA

hide sequence

RefSeq Acc Id:

XM_037982831 ⟹ XP_037838759

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666035	3,417,617 - 3,468,073 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007966766	(Get FASTA)	NCBI Sequence Viewer
	XP_007966767	(Get FASTA)	NCBI Sequence Viewer
	XP_007966768	(Get FASTA)	NCBI Sequence Viewer
	XP_037838759	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000007363.1

RefSeq Acc Id:	XP_007966768 ⟸ XM_007968577
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RFH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007966766 ⟸ XM_007968575
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RFH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007966767 ⟸ XM_007968576
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RFH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000007363 ⟸ ENSCSAT00000009238

RefSeq Acc Id:	XP_037838759 ⟸ XM_037982831
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RFH4 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000011150	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000009238.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	HEAT_type_2	UniProtKB/TrEMBL
NCBI Gene	TEX10	ENTREZGENE
PANTHER	PTHR16056:SF2	UniProtKB/TrEMBL
	REGULATOR OF MICROTUBULE DYNAMICS PROTEIN	UniProtKB/TrEMBL
PROSITE	HEAT_REPEAT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A0D9RFH4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar