ZNF613 (zinc finger protein 613) - Rat Genome Database

Name: ZNF613
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ZNF613 (zinc finger protein 613) Chlorocebus sabaeus

Analyze

Symbol:

ZNF613

Name:

zinc finger protein 613

RGD ID:

18628538

Description:

ENCODES a protein that exhibits histone H3K36 methyltransferase activity (inferred); histone H3K4 methyltransferase activity (inferred); metal ion binding (inferred); INVOLVED IN chromatin remodeling (inferred); positive regulation of reciprocal meiotic recombination (inferred); regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	44,746,087 - 44,761,223 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	44,754,982 - 44,762,648 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	24,800,824 - 24,817,202 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (IEA)

positive regulation of reciprocal meiotic recombination (IEA)

regulation of DNA-templated transcription (IEA)

regulation of gene expression (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

histone H3K36 methyltransferase activity (IEA)

histone H3K4 methyltransferase activity (IEA)

metal ion binding (IEA)

protein binding (ISO)

recombination hotspot binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ZNF613
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	44,746,087 - 44,761,223 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	44,754,982 - 44,762,648 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	24,800,824 - 24,817,202 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ZNF613
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	51,927,472 - 51,946,621 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	51,927,147 - 51,948,759 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	52,430,725 - 52,449,874 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	57,122,500 - 57,140,817 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	57,122,499 - 57,140,817	NCBI
Celera	19	49,480,254 - 49,498,577 (+)	NCBI		Celera
Cytogenetic Map	19	q13.41	NCBI
HuRef	19	48,761,338 - 48,779,662 (+)	NCBI		HuRef
CHM1_1	19	52,432,545 - 52,450,868 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	55,014,667 - 55,033,819 (+)	NCBI		T2T-CHM13v2.0

ZNF613
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	57,964,697 - 58,023,932 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	59,888,946 - 59,948,251 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	48,867,586 - 48,889,317 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	57,748,724 - 57,767,160 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	57,757,415 - 57,767,160 (+)	Ensembl	panpan1.1		panPan2

ZNF613
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	105,197,543 - 105,227,476 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	105,210,569 - 105,219,870 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	104,771,134 - 104,837,189 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	105,707,167 - 105,773,492 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	105,630,424 - 105,737,074 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	105,379,820 - 105,445,927 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	105,028,188 - 105,084,782 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	105,815,452 - 105,881,718 (-)	NCBI		UU_Cfam_GSD_1.0

Znf613
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	4,674,921 - 4,692,926 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004937026	216,683 - 226,126 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004937026	214,378 - 225,794 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC100625971
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	58,166,101 - 58,183,504 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	58,166,640 - 58,189,111 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	51,973,256 - 52,023,948 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium
Low	36	20	60
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007997816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007997817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007997818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007997819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007997820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007997821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000016521 ⟹ ENSCSAP00000016027

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	6	44,754,982 - 44,762,648 (+)	Ensembl

RefSeq Acc Id:

XM_007997816 ⟹ XP_007996007

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	44,746,087 - 44,761,223 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	24,802,538 - 24,817,202 (+)	NCBI

Sequence:

show sequence

AGAAGTGGAAGAATTCAGGAAAAGTGCAGGCTCTGGGAAGTGTCGGTGGGTTCCCCGGAAAATC
AGAGATGGCATCTCACTATGTTGTCCAGACTGATCTTGAACTCCTGACCTCAAGTGATCCTCTC
TCCTTCGCCTCCTAAAGTGCTGGGATTCCAGGTGTGAGCCACCTCACCCGGTCACATTTATCCA
TCTTGTGAAATATTGCTTTGTTTTTTGGGGGCATTTCAAACCCGCAGTACCTAACTCCAGGGGC
GAGACACTTCAAGTGAGGTGAGGAGGAGGTTCCAGGACCTGGATCCCATCTTTTGCAGGGATAT
AATTCACCAGAGACCAAGATTTCTAGCCAGAAATTGAGGGCAGCTCAAGGAGAGACTCCAGACA
CAGCATCCTACTTACTGGCTATTTCCCAGTAACGGAAGAAAATGATCAAGTCCCAGGAATCACT
GACCCTGGAGGATGTGGCTGTGGAGTTCACCTGGGAAGAGTGGCAGCTCCTCGGCCCTGCTCAG
AAGGACCTGTACCGGGACGTGATGTTGGAGAACTATAGCAACCTGGTGTCAGTGGGGTATCAAG
CCAGCAAGCCAGATGCACTCTCCAAGTTGGAACAAGGAGAACCATGGATGGTAGAAAATGAAAT
CCACAGCCAAATCTGTCCAGAAATCAAGAAAGTTGACAATCGTCTACAGATGCACTCACAAAAC
CAAAGATGTCTGAAGAGAGTGGAACAATGCCATAAACATGCATTTGGAAACATCATTCATCAGA
GGAAAAGTGATTTTCCTTTAAGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAA
ATCAAATTTAAGTTTAATCAACCAGAACAAAAGGTATGAAATCAAGAAGTCTGTGGGGGTTAAT
AGAGATGGGAAATCCTTCCTTCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCG
AAGGTGGAAATTCTACGAATACAAATTCACAGTTCATTAAGCATCAGCAAACTCAAAAGATAGA
TAAACCCCATGTATGCACTGAGTGCGGGAAGGCTTTCCGCAAGAAGTCTCGCCTCATCTATCAT
CAGAGAGTTCACACTGGAGAGAAACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAA
AGTCCGGGCTCACTGAACACCAGAGAAATCACACGGGAGAGAAACCCTATGAATGCACTGAATG
TGACAAAGCATTCCGCTGGAAATCACAGCTCAATGTGCACCAGAAAATTCATACAGGAGAGAAA
TCATATATATGCAGTGATTGTGGAAAAGGCTTCATCAAGAAGTCTCAGCTCATTAATCATCAGA
GAGTTCATACAGGAGAGAAACCACATGGATGCGGCCTGTGTGGGAAAGCCTTCTCCAAAAAGTC
CAGGCTCACTGAACACCAGAGAACTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGAC
AAAGCATTCCGCTGGAAATCACAGCTCAATGCGCATCAGAAAGCTCACACAGGAGAGAAGTCAT
ATATATGCAGTGATTGTGGAAAAGGCTTCATTCAGAAGGGCAATCTCATTGTACATCAGCGAAT
TCATACTGGAGAAAAACCCTATATATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGTAAT
CTCCTTATTCATCGACGTACTCACACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAG
GCTTCAGCCAGAAAACATGCTTAATATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGT
ATGTACTGAGTGTGGAAAATCCTGTTCACACAAGTCGGGTCTCATTAACCACCAGAGAATTCAC
ACAGGAGAAAAACCCTATACATGCAGTGACTGTGGGAAAGCCTTCAGAGATAAATCATGTCTCA
ACAGACATCGGAGAACTCATACAGGGGAGAGACCCTATGGATGCTCTGATTGTGGGAAAGCTTT
CTCCCACTTGTCATGCCTTGTTTATCATAAGGGAATGCTGCATGCAAGAGAGAAACGTGTAGGT
TCAGTCAAATTGGAAAATCCTTTCTCAGAGAGTCATAGCTTATCACATACAAGTGATCTCATAC
AGGATAAAGACTCTGTTAACATGGTGACTATGCAGATGCCTTCTGTGGCAGCTCAGACTTCGTT
AACTAACAGTGAGTTCCAAGCAGATAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGT
TCAGTCTCAGCAGATGGTAGAATTTGCACAGAATAAAAACCTTATGAATGCGGTGAA

hide sequence

RefSeq Acc Id:

XM_007997817 ⟹ XP_007996008

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	44,748,458 - 44,761,223 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	24,807,872 - 24,817,202 (+)	NCBI

Sequence:

show sequence

CCTAAAGTGCTGGGATTCCAGCCCGCAGTACCTAACTCCAGGGGCGAGACACTTCAAGTGAGGT
GAGGAGGAGGTTCCAGGACCTGGATCCCATCTTTTGCAGGGATATAATTCACCAGAGACCAAGA
TTTCTAGCCAGAAATTGAGGGCAGCTCAAGGAGAGACTCCAGACACAGCATCCTACTTACTGGC
TATTTCCCAGTAACGGAAGAAAATGATCAAGTCCCAGGAATCACTGACCCTGGAGGATGTGGCT
GTGGAGTTCACCTGGGAAGAGTGGCAGCTCCTCGGCCCTGCTCAGAAGGACCTGTACCGGGACG
TGATGTTGGAGAACTATAGCAACCTGGTGTCAGTGGGGTATCAAGCCAGCAAGCCAGATGCACT
CTCCAAGTTGGAACAAGGAGAACCATGGATGGTAGAAAATGAAATCCACAGCCAAATCTGTCCA
GAAATCAAGAAAGTTGACAATCGTCTACAGATGCACTCACAAAACCAAAGATGTCTGAAGAGAG
TGGAACAATGCCATAAACATGCATTTGGAAACATCATTCATCAGAGGAAAAGTGATTTTCCTTT
AAGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTAAGTTTAATC
AACCAGAACAAAAGGTATGAAATCAAGAAGTCTGTGGGGGTTAATAGAGATGGGAAATCCTTCC
TTCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTACGAA
TACAAATTCACAGTTCATTAAGCATCAGCAAACTCAAAAGATAGATAAACCCCATGTATGCACT
GAGTGCGGGAAGGCTTTCCGCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGAG
AGAAACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCCGGGCTCACTGAACA
CCAGAGAAATCACACGGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGG
AAATCACAGCTCAATGTGCACCAGAAAATTCATACAGGAGAGAAATCATATATATGCAGTGATT
GTGGAAAAGGCTTCATCAAGAAGTCTCAGCTCATTAATCATCAGAGAGTTCATACAGGAGAGAA
ACCACATGGATGCGGCCTGTGTGGGAAAGCCTTCTCCAAAAAGTCCAGGCTCACTGAACACCAG
AGAACTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAAT
CACAGCTCAATGCGCATCAGAAAGCTCACACAGGAGAGAAGTCATATATATGCAGTGATTGTGG
AAAAGGCTTCATTCAGAAGGGCAATCTCATTGTACATCAGCGAATTCATACTGGAGAAAAACCC
TATATATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGTAATCTCCTTATTCATCGACGTA
CTCACACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAGGCTTCAGCCAGAAAACATG
CTTAATATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGTATGTACTGAGTGTGGAAAA
TCCTGTTCACACAAGTCGGGTCTCATTAACCACCAGAGAATTCACACAGGAGAAAAACCCTATA
CATGCAGTGACTGTGGGAAAGCCTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACTCA
TACAGGGGAGAGACCCTATGGATGCTCTGATTGTGGGAAAGCTTTCTCCCACTTGTCATGCCTT
GTTTATCATAAGGGAATGCTGCATGCAAGAGAGAAACGTGTAGGTTCAGTCAAATTGGAAAATC
CTTTCTCAGAGAGTCATAGCTTATCACATACAAGTGATCTCATACAGGATAAAGACTCTGTTAA
CATGGTGACTATGCAGATGCCTTCTGTGGCAGCTCAGACTTCGTTAACTAACAGTGAGTTCCAA
GCAGATAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATGGTA
GAATTTGCACAGAATAAAAACCTTATGAATGCGGTGAA

hide sequence

RefSeq Acc Id:

XM_007997818 ⟹ XP_007996009

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	44,748,512 - 44,761,223 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	24,802,538 - 24,817,202 (+)	NCBI

Sequence:

show sequence

TCTTGTGAAATATTGCTTTGTTTTTTGGGGGCATTTCAAAGGATATAATTCACCAGAGACCAAG
ATTTCTAGCCAGAAATTGAGGGCAGCTCAAGGAGAGACTCCAGACACAGCATCCTACTTACTGG
CTATTTCCCAGTAACGGAAGAAAATGATCAAGTCCCAGGAATCACTGACCCTGGAGGATGTGGC
TGTGGAGTTCACCTGGGAAGAGTGGCAGCTCCTCGGCCCTGCTCAGAAGGACCTGTACCGGGAC
GTGATGTTGGAGAACTATAGCAACCTGGTGTCAGTGGGGTATCAAGCCAGCAAGCCAGATGCAC
TCTCCAAGTTGGAACAAGGAGAACCATGGATGGTAGAAAATGAAATCCACAGCCAAATCTGTCC
AGAAATCAAGAAAGTTGACAATCGTCTACAGATGCACTCACAAAACCAAAGATGTCTGAAGAGA
GTGGAACAATGCCATAAACATGCATTTGGAAACATCATTCATCAGAGGAAAAGTGATTTTCCTT
TAAGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTAAGTTTAAT
CAACCAGAACAAAAGGTATGAAATCAAGAAGTCTGTGGGGGTTAATAGAGATGGGAAATCCTTC
CTTCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTACGA
ATACAAATTCACAGTTCATTAAGCATCAGCAAACTCAAAAGATAGATAAACCCCATGTATGCAC
TGAGTGCGGGAAGGCTTTCCGCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGA
GAGAAACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCCGGGCTCACTGAAC
ACCAGAGAAATCACACGGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTG
GAAATCACAGCTCAATGTGCACCAGAAAATTCATACAGGAGAGAAATCATATATATGCAGTGAT
TGTGGAAAAGGCTTCATCAAGAAGTCTCAGCTCATTAATCATCAGAGAGTTCATACAGGAGAGA
AACCACATGGATGCGGCCTGTGTGGGAAAGCCTTCTCCAAAAAGTCCAGGCTCACTGAACACCA
GAGAACTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAA
TCACAGCTCAATGCGCATCAGAAAGCTCACACAGGAGAGAAGTCATATATATGCAGTGATTGTG
GAAAAGGCTTCATTCAGAAGGGCAATCTCATTGTACATCAGCGAATTCATACTGGAGAAAAACC
CTATATATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGTAATCTCCTTATTCATCGACGT
ACTCACACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAGGCTTCAGCCAGAAAACAT
GCTTAATATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGTATGTACTGAGTGTGGAAA
ATCCTGTTCACACAAGTCGGGTCTCATTAACCACCAGAGAATTCACACAGGAGAAAAACCCTAT
ACATGCAGTGACTGTGGGAAAGCCTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACTC
ATACAGGGGAGAGACCCTATGGATGCTCTGATTGTGGGAAAGCTTTCTCCCACTTGTCATGCCT
TGTTTATCATAAGGGAATGCTGCATGCAAGAGAGAAACGTGTAGGTTCAGTCAAATTGGAAAAT
CCTTTCTCAGAGAGTCATAGCTTATCACATACAAGTGATCTCATACAGGATAAAGACTCTGTTA
ACATGGTGACTATGCAGATGCCTTCTGTGGCAGCTCAGACTTCGTTAACTAACAGTGAGTTCCA
AGCAGATAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATGGT
AGAATTTGCACAGAATAAAAACCTTATGAATGCGGTGAA

hide sequence

RefSeq Acc Id:

XM_007997819 ⟹ XP_007996010

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	44,746,117 - 44,761,223 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	24,800,824 - 24,816,453 (+)	NCBI

Sequence:

show sequence

CTCTGGGAAGTGTCGGTGGGTTCCCCGGAAAATCAGGAATCACTGACCCTGGAGGATGTGGCTG
TGGAGTTCACCTGGGAAGAGTGGCAGCTCCTCGGCCCTGCTCAGAAGGACCTGTACCGGGACGT
GATGTTGGAGAACTATAGCAACCTGGTGTCAGTGGGGTATCAAGCCAGCAAGCCAGATGCACTC
TCCAAGTTGGAACAAGGAGAACCATGGATGGTAGAAAATGAAATCCACAGCCAAATCTGTCCAG
AAATCAAGAAAGTTGACAATCGTCTACAGATGCACTCACAAAACCAAAGATGTCTGAAGAGAGT
GGAACAATGCCATAAACATGCATTTGGAAACATCATTCATCAGAGGAAAAGTGATTTTCCTTTA
AGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTAAGTTTAATCA
ACCAGAACAAAAGGTATGAAATCAAGAAGTCTGTGGGGGTTAATAGAGATGGGAAATCCTTCCT
TCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTACGAAT
ACAAATTCACAGTTCATTAAGCATCAGCAAACTCAAAAGATAGATAAACCCCATGTATGCACTG
AGTGCGGGAAGGCTTTCCGCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGAGA
GAAACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCCGGGCTCACTGAACAC
CAGAGAAATCACACGGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGA
AATCACAGCTCAATGTGCACCAGAAAATTCATACAGGAGAGAAATCATATATATGCAGTGATTG
TGGAAAAGGCTTCATCAAGAAGTCTCAGCTCATTAATCATCAGAGAGTTCATACAGGAGAGAAA
CCACATGGATGCGGCCTGTGTGGGAAAGCCTTCTCCAAAAAGTCCAGGCTCACTGAACACCAGA
GAACTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAATC
ACAGCTCAATGCGCATCAGAAAGCTCACACAGGAGAGAAGTCATATATATGCAGTGATTGTGGA
AAAGGCTTCATTCAGAAGGGCAATCTCATTGTACATCAGCGAATTCATACTGGAGAAAAACCCT
ATATATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGTAATCTCCTTATTCATCGACGTAC
TCACACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAGGCTTCAGCCAGAAAACATGC
TTAATATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGTATGTACTGAGTGTGGAAAAT
CCTGTTCACACAAGTCGGGTCTCATTAACCACCAGAGAATTCACACAGGAGAAAAACCCTATAC
ATGCAGTGACTGTGGGAAAGCCTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACTCAT
ACAGGGGAGAGACCCTATGGATGCTCTGATTGTGGGAAAGCTTTCTCCCACTTGTCATGCCTTG
TTTATCATAAGGGAATGCTGCATGCAAGAGAGAAACGTGTAGGTTCAGTCAAATTGGAAAATCC
TTTCTCAGAGAGTCATAGCTTATCACATACAAGTGATCTCATACAGGATAAAGACTCTGTTAAC
ATGGTGACTATGCAGATGCCTTCTGTGGCAGCTCAGACTTCGTTAACTAACAGTGAGTTCCAAG
CAGATAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATGGTAG
AATTTGCACAGAATAAAAACCTTATGAATGCGGTGAA

hide sequence

RefSeq Acc Id:

XM_007997821 ⟹ XP_007996012

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	44,748,519 - 44,761,223 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	24,802,538 - 24,817,202 (+)	NCBI

Sequence:

show sequence

AAATATTGCTTTGTTTTTTGGGGGCATTTCAAAGAATCACTGACCCTGGAGGATGTGGCTGTGG
AGTTCACCTGGGAAGAGTGGCAGCTCCTCGGCCCTGCTCAGAAGGACCTGTACCGGGACGTGAT
GTTGGAGAACTATAGCAACCTGGTGTCAGTGGGGTATCAAGCCAGCAAGCCAGATGCACTCTCC
AAGTTGGAACAAGGAGAACCATGGATGGTAGAAAATGAAATCCACAGCCAAATCTGTCCAGAAA
TCAAGAAAGTTGACAATCGTCTACAGATGCACTCACAAAACCAAAGATGTCTGAAGAGAGTGGA
ACAATGCCATAAACATGCATTTGGAAACATCATTCATCAGAGGAAAAGTGATTTTCCTTTAAGG
CAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTAAGTTTAATCAACC
AGAACAAAAGGTATGAAATCAAGAAGTCTGTGGGGGTTAATAGAGATGGGAAATCCTTCCTTCA
TGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTACGAATACA
AATTCACAGTTCATTAAGCATCAGCAAACTCAAAAGATAGATAAACCCCATGTATGCACTGAGT
GCGGGAAGGCTTTCCGCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGAGAGAA
ACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCCGGGCTCACTGAACACCAG
AGAAATCACACGGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAAT
CACAGCTCAATGTGCACCAGAAAATTCATACAGGAGAGAAATCATATATATGCAGTGATTGTGG
AAAAGGCTTCATCAAGAAGTCTCAGCTCATTAATCATCAGAGAGTTCATACAGGAGAGAAACCA
CATGGATGCGGCCTGTGTGGGAAAGCCTTCTCCAAAAAGTCCAGGCTCACTGAACACCAGAGAA
CTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAATCACA
GCTCAATGCGCATCAGAAAGCTCACACAGGAGAGAAGTCATATATATGCAGTGATTGTGGAAAA
GGCTTCATTCAGAAGGGCAATCTCATTGTACATCAGCGAATTCATACTGGAGAAAAACCCTATA
TATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGTAATCTCCTTATTCATCGACGTACTCA
CACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAGGCTTCAGCCAGAAAACATGCTTA
ATATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGTATGTACTGAGTGTGGAAAATCCT
GTTCACACAAGTCGGGTCTCATTAACCACCAGAGAATTCACACAGGAGAAAAACCCTATACATG
CAGTGACTGTGGGAAAGCCTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACTCATACA
GGGGAGAGACCCTATGGATGCTCTGATTGTGGGAAAGCTTTCTCCCACTTGTCATGCCTTGTTT
ATCATAAGGGAATGCTGCATGCAAGAGAGAAACGTGTAGGTTCAGTCAAATTGGAAAATCCTTT
CTCAGAGAGTCATAGCTTATCACATACAAGTGATCTCATACAGGATAAAGACTCTGTTAACATG
GTGACTATGCAGATGCCTTCTGTGGCAGCTCAGACTTCGTTAACTAACAGTGAGTTCCAAGCAG
ATAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATGGTAGAAT
TTGCACAGAATAAAAACCTTATGAATGCGGTGAA

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Protein Sequences


Protein RefSeqs	XP_007996007	(Get FASTA)	NCBI Sequence Viewer
	XP_007996008	(Get FASTA)	NCBI Sequence Viewer
	XP_007996009	(Get FASTA)	NCBI Sequence Viewer
	XP_007996010	(Get FASTA)	NCBI Sequence Viewer
	XP_007996012	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000016027.1

RefSeq Acc Id:	XP_007996007 ⟸ XM_007997816
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007996010 ⟸ XM_007997819
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9S588 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007996008 ⟸ XM_007997817
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007996009 ⟸ XM_007997818
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007996012 ⟸ XM_007997821
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9S588 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000016027 ⟸ ENSCSAT00000016521

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000002006	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000016521.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB	UniProtKB/TrEMBL
	KRAB_dom_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	ZNF613	ENTREZGENE
PANTHER	HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9	UniProtKB/TrEMBL
	PR DOMAIN ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF109640	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0D9S588	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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