Advanced Search (OLGA)

Gene: TRPM8 (transient receptor potential cation channel subfamily M member 8) Chlorocebus sabaeus

Analyze

Symbol:

TRPM8

Name:

transient receptor potential cation channel subfamily M member 8

RGD ID:

18599602

Description:

ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); response to cold (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane raft (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	10	121,459,070 - 121,561,154 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666040	79,436,945 - 79,536,853 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	10	119,944,875 - 120,045,295 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	119,954,947 - 120,042,296 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asthma (ISO)

cervical cancer (ISO)

cholangiocarcinoma (ISO)

colorectal cancer (ISO)

hepatocellular carcinoma (ISO)

melanoma (ISO)

migraine (ISO)

migraine without aura (ISO)

ovarian serous cystadenocarcinoma (ISO)

thymoma (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium ion transmembrane transport (IEA)

calcium ion transport (ISO)

calcium-mediated signaling (IEA)

intracellular calcium ion homeostasis (ISO)

metal ion transport (IEA)

monoatomic cation transmembrane transport (IEA)

positive regulation of cold-induced thermogenesis (IEA)

response to cold (ISO)

response to temperature stimulus (ISO)

thermoception (ISO)

Cellular Component

endoplasmic reticulum membrane (ISO)

external side of plasma membrane (IEA)

membrane (IEA)

membrane raft (IEA)

plasma membrane (IEA)

plasma membrane raft (ISO)

Molecular Function

calcium channel activity (IEA)

calcium ion transmembrane transporter activity (IEA)

identical protein binding (IEA)

ligand-gated calcium channel activity (IEA)

monoatomic cation channel activity (IEA)

monoatomic ion channel activity (IEA,ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TRPM8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	10	121,459,070 - 121,561,154 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666040	79,436,945 - 79,536,853 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	10	119,944,875 - 120,045,295 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	119,954,947 - 120,042,296 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

TRPM8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	233,917,373 - 234,019,522 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	233,917,373 - 234,019,522 (+)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	2	234,826,018 - 234,928,166 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	234,490,782 - 234,592,905 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	234,608,042 - 234,710,165	NCBI
Celera	2	228,546,409 - 228,648,542 (+)	NCBI		Celera
Cytogenetic Map	2	q37.1	NCBI
HuRef	2	226,625,779 - 226,727,969 (+)	NCBI		HuRef
CHM1_1	2	234,831,850 - 234,933,975 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	234,406,317 - 234,508,483 (+)	NCBI		T2T-CHM13v2.0

Trpm8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	88,234,457 - 88,318,909 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	88,205,383 - 88,317,015 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	88,306,735 - 88,388,853 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	88,277,661 - 88,389,293 (+)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	1	90,203,287 - 90,285,426 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	90,134,453 - 90,220,022 (+)	NCBI		MGSCv36	mm8
Celera	1	91,265,235 - 91,346,306 (+)	NCBI		Celera
Cytogenetic Map	1	D	NCBI
cM Map	1	44.57	NCBI

Trpm8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	96,315,567 - 96,437,959 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	96,351,681 - 96,436,617 (+)	Ensembl				GRCr8
mRatBN7.2	9	88,897,039 - 88,990,167 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	88,903,880 - 88,988,552 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	97,328,476 - 97,413,096 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	102,464,664 - 102,549,168 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	100,832,088 - 100,916,734 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	99,973,316 - 100,061,793 (+)	NCBI
Lyon_Normotensive	9	95,823,215 - 95,911,694 (+)	NCBI
Lyon_Hypertensive	9	95,947,425 - 96,035,894 (+)	NCBI
F344_StmMcwi	9	97,937,898 - 98,026,371 (+)	NCBI
Rnor_6.0	9	95,393,370 - 95,484,528 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	95,398,237 - 95,482,890 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	9	95,085,454 - 95,170,108 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	87,193,779 - 87,278,440 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	86,465,338 - 86,549,713 (+)	NCBI		Celera
RGSC_v3.1	9	87,380,876 - 87,465,529 (+)	NCBI
Cytogenetic Map	9	q35	NCBI

Trpm8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	2,185,534 - 2,265,261 (-)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955453	2,185,534 - 2,265,261 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRPM8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	136,565,837 - 136,659,793 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	136,580,802 - 136,674,757 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	121,160,045 - 121,261,645 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	240,029,984 - 240,130,524 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	240,039,104 - 240,130,524 (+)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

TRPM8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	45,261,092 - 45,357,560 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	45,261,107 - 45,353,282 (+)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	45,758,997 - 45,851,175 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	45,600,006 - 45,703,702 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	45,609,098 - 45,700,909 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	45,501,675 - 45,593,531 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	45,310,182 - 45,402,042 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	45,538,477 - 45,630,602 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Trpm8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	7	193,057,268 - 193,131,677 (+)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405303	187,447,832 - 187,530,684 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936525	3,413,747 - 3,491,815 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936525	3,413,730 - 3,491,815 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRPM8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	134,145,943 - 134,267,970 (+)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	15	134,185,316 - 134,267,973 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	148,620,717 - 148,702,575 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Trpm8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624847	180,040 - 320,494 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624847	194,497 - 320,600 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	25	41,145,813 - 41,280,936 (+)	Ensembl

Trpm8
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	160,348,136 - 160,434,008 (+)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Variants

Variants in TRPM8
3145 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
60	20	17	17	17	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007966720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007966721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007966722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007966723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073020148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000004274 ⟹ ENSCSAP00000002535

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	10	119,954,947 - 120,042,296 (+)	Ensembl

RefSeq Acc Id:

XM_007966721 ⟹ XP_007964912

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	10	121,459,070 - 121,561,154 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	79,436,945 - 79,536,853 (-)	NCBI
ChlSab1.1	10	119,944,875 - 120,045,295 (+)	NCBI

Sequence:

show sequence

TCAAGCGATTGGCCCACCTCAGCCTCCTAAAGTGCTCGGATTACAGGCATGAGCCACTGCGCCC
CGCTGGCTCAATATTTCTAACAGCTAAAAAGTTCATTTTGCTGTTCCGCTCCTCAGATCGATCT
GCTCCCCTGTGCAGTGATATAGCTGTGCTTGGGGCCATGCTGGGTATGGTAGTTTTTAGTCCTA
GGACCCATATGTAGAGTAATTCTGAGATTTCTCTGATTCTCTCTCTCCATTTCTGGCTGGATCT
CTTCTCACACAGGTCCTCGTTCAAATCTATCATTTCCAGTTTTCCATAGCCCCCACCCTTCCCT
ACTACCTTACACTTGACTGCTCCCTTCATCTTTATGACCTGTCTGAGGCTTGGAATATTTGACT
TTGAGACCTCTGTCTGAAGTCTTTTGTCTCTCTGTCGAGGGGGTTTTCTTCACGAATTGAACAT
GCTTTCTGCAGGAGTTATCACTACAACTCTATCCTTCCTTTCAGACCTTGCTCAAATCTCTCTG
CCTTTGTAAAAAATCCCCTTCACGCTCCTTCTCTTTCATCTCTAACCTTTTTGCAAGTGTATGT
CTTGTGCAATCAGTTCCTAAAATACATTATCCTATTTGTATTTCTCTATGACATATGCTTCATA
TGAAAATAACGTAATAGAAACAATGGCCAACACAAAGGAACATTAGTTATAATATAACTATTAT
GTTTGTGGCACATGATTTAAGTAAAATGACCGAAAGTTGCCCACTGACAATTGTTACTTATTTC
TTCTAGGAGAGTTCTTCCAAAGTATAATTTCAAGGGGACAGGAAATAGCTGTAAATTAATAAAG
TTAGATTTGCTCACCTCTGTGATGCCCTCTTGCCTGGCTCAATACTGCATTTAGTTGGTATGAG
GAAAGTTCACAAAATCTGCGAAAAAGCAATGTTGGTTAAATTTCCTCTAATAATTTTTTTCCTA
ATCTTAATTAAGAGCTTTTAATTTATTAATTAATCTTTTCATCACTTTCTATAATGAGCATTTC
CCATTTTATTTGCGGTTTTTAAATGTGCCATTAATGGCAGAAATTAAATATTAGAATGATTTCA
TACTATGGTGTTATTGTCAAGCTAAGATTGGGAATATGGTATCATTTCTTTATTAGCATTTAAA
ATATCATGTTCGCTAATTATCCATTCCCTACTCGTATTCTATTGCTAAATTGCTACTGTGCGTG
GAGGCTTTAGAAGTCTTCTTGCAATTTCAGTGGCTTAAGTTTTTTGTTCCTCTGCTTAAAAGAA
CCTCAGGGAAGAAGGCGGGGCTAAGAAGATTCCAGTTATAAAAGCTTTCCTCCCCCTGTGCGGA
GAGACCGGCAGGATCCTTGGGTGAAAGAAAATCCTGCTTGATAAAAACCATCACTTACGAAAAG
ATGTCCTTTGGGGGAGCCAGGCTCAGCATGAGGAACAGAAGGAACGGCACTCTGGACAGCACTC
GGACCCTGTACTCCAGCGCGTCTCGGAGCACAGATTTGTCTTACAGTGAAAGCGACTTGGCGAA
TTTTATTCAAGCAAATTTTAAGAAACGAGAATGTGTCTTCTTTACCAAAGATTCCAAGGCCACG
GAGAATGTGTGCAAGTGTGGCTATGCCCAGAGCCAGCACATGGAAGGCACCCAGATCAACCAAA
GCGAGAAATGGAACTACAAGAAACACACCAAGGAATTTCCTACGGACGCCTTTGGGGATATTCA
GTTTGAGACACTGGGGAAGAAAGGGAAGTATATCCGTCTGTCCTGCGACACGGACGCAGAAATC
CTCTACGAGCTGCTGACCCAGCACTGGCACCTGAAAACACCCAACCTGGTCATTTCCGTGACCG
GGGGCGCCAAGAACTTCGCCCTGAAGCCGCGCATGCGCAAAATCTTCAGCCGGCTCATCTACAT
CGCGCAGTCCAAAGGTGCTTGGATTCTTACGGGAGGCACCCATTATGGCCTGATGAAGTACATC
GGGGAGGTGGTGAGAGATAACACCATCAGCAGGAGTTCAGAGGAGAATATTGTGGCCATTGGCG
TAGCAGCTTGGGGCATGGTCTCCAACCGGGACACCCTCATCAGGAATTGTGATGCTGAGGGCTA
TTTTTCAGCCCAGTACCCTATGGATGACTTCACGAGAGACCCTCTGTATATCCTGGACAACAAC
CACACACATTTGCTGCTCGTAGACAATGGCTGTCATGGACATCCCACCGTGGAAGCAAAGCTCC
GGAATCAGCTAGAGAAATACATCTCTGAGCGCACTATTCAAGATTCCAACTACGGTGGCAAGAT
CCCCATCGTGTGTTTTGCCCAAGGAGGTGGAAAAGAGACTTTGAAAGCCATCAATACTTCCATC
AAAAGTAAAATTCCTTGTGTGGTGGTGGAAGGCTCGGGCCAGATCGCTGATGTGATCGCCAGCC
TGGTGGAGGTGGAGGATGCCCTGACATCTTCTGCCGTCAAGGAGAAGCTGGTACGCTTTTTACC
CCGCACGGTGTCCCGGCTGCCGGAGGAGGAGACTGAGAGTTGGATCAAATGGCTCAAAGAAATT
CTTGAAAGTTCTCACCTATTAACAGTTATTAAAATGGAAGAAGCTGGGGATGAAATTGTGAGCA
ATGCCATCTCCTACGCTCTATATAAAGCCTTCAGCACCAATGAGCAAGACAAGGATAACTGGAA
TGGGCAGCTGAAGCTTCTGCTGGAGTGGAACCAGCTGGACTTAGCCAATGATGAGATTTTCACC
AACGACCGCCGATGGGAGTCTGCTGACCTTCAAGAAGTCATGTTTACGGCTCTCATAAAGGACA
GACCCAAGTTTGTCCGCCTCTTTCTGGAGAACGGCTTGAACCTGCGGAAGTTTCTCACCCACGA
TGTCCTCACTGAGCTCTTCTCCAACCACTTCAGCACCCTTGTGTACCGGAATCTGCAGATCGCC
AAGAATTCCTATAACGATGCCCTCCTCACGTTTGTCTGGAAACTGGTTGCAAACTTCCGAAGAG
GCTTCCGGAAGGAAGACAGAAATGGCCGGGACGAGATGGACATAGAACTCCACGACGTGTCTCC
TATTACTCGGCATCCCCTGCAAGCTCTCTTCATCTGGGCCATTCTTCAGAACAAGAAGGAACTC
TCCAAAGTCATCTGGGAGCAGACCAGGGGCTGCACTCTGGCAGCCCTGGGAGCCAGCAAGCTTC
TGAAGACTCTGGCCAAAGTGAAGAACGACATCAATGCTGCTGGGGAGTCCGAGGAGCTGGCTAA
TGAGTACGAGACGCGGGCTGTCGAGCTGTTCACTGAGTGTTACAGCAGCGATGAAGACTTGGCA
GAACAGCTGCTGGTCTATTCCTGTGAAGCCTGGGGTGGAAGCAACTGTCTGGAGCTGGCGGTGG
AGGCCACAGACCAGCATTTCATCGCCCAGCCTGGGGTCCAGAATTTTCTTTCTAAGCAATGGTA
TGGAGAGATTTCACGAGACACCAAGAACTGGAAGATTATCCTGTGTCTCTTTATTATACCTTTG
GTGGGCTGTGGCTTTGTATCATTTAGGAAGAAGCCTGTTGACAAGCACAAGAAGCTGCTTTGGT
ACTATGTGGCGTTCTTCACCTCCCCCTTCGTGGTCTTCTCCTGGAACGTGGTCTTCTACATCGC
CTTCCTCCTGCTGTTTGCCTACGTGCTGCTCATGGATTTCCATTCGGTGCCACACCCCCCTGAG
CTGGTCCTGTACGCGCTGGTCTTTGTCCTCTTCTGTGATGAAGTGAGACAGTGGTACATAAATG
GGGTGAATTATTTTACTGACCTGTGGAATGTTATGGACACGCTGGGGCTTTTTTACTTCATAGC
AGGAATTGTGTTTCGCCTCCACTCTTCTAATAAAAGCTCTTTGTATTCTGGACGAGTCATTTTC
TGTCTGGACTACATTATTTTCACTCTAAGATTGATCCACATTTTTACTGTAAGCAGAAACTTAG
GACCCAAGATTATAATGCTGCAGAGGATGCTCATCGACGTGTTCTTCTTCCTGTTCCTCTTTGC
GGTGTGGATGGTGGCCTTCGGCGTGGCCAGGCAAGGGATCCTCAGGCAGAACGAGCAGCGCTGG
AGGTGGATATTCCGTTCGGTCATCTACGAGCCCTACCTGGCCATGTTCGGCCAGGTGCCCAGTG
ACGTGGATGGTACCACGTATGACTTTGCCCACTGCACCTTCACTGGGAATGAGTCCAAGCCACT
GTGCGTGGAGCTGGATGAGCACAACCTGCCCCGGTTCCCTGAGTGGATCACCATCCCCCTGGTG
TGCATCTACATGTTATCCACCAACATCCTGCTGGTCAACCTGCTGGTCGCCATGTTTGGCTACA
CGGTGGGCACTGTCCAGGAGAACAATGACCAGGTCTGGAAGTTCCAGAGGTACTTCCTGGTGCA
GGAGTACTGCAGCCGCCTCAATATCCCCTTCCCTTTCGTCGTCTTCGCTTACTTCTACATGGTG
GTGAAGAAGTGCTTCAAGTGTTGCTGTAAGGAGAAAAACATGGAGTCTTCTGTCTGCTGTTTCA
AAAATGAGGACAACGAGACTTTGGCATGGGAGGGTGTCATGAAGGAAAATTACCTTGTCAAGAT
CAACACGAAAGCCAACGACACCTCAGAGGAAATGAGGCATCGATTTAGACAACTGGATACAAAG
CTTAATGATCTCAAGGGTCTTCTGAAAGAAATTGCTAATAAAATCAAATAAAACTGTATGAACT
CTAATGGAGAAAATCTAATTATAGCAAGATCATATTAAGGAATGCTGATGAACAATTTTGCTAT
CGACACTAAATGAGAGATTTTCAGGGCCCTGGGTACAGGATGGATGATTTTTAATCACCCTAGT
GTGCTGAAACCTTGAGAAAGTGTGTGACGGGTTTCACACGTGAAGATGGATATAAAGGAAGAAC
GTTTCCTTTACGTGTTTCTCCAGAATGGTGCCTGTTTCTCTCTGTGTCTCAGTGCCTGGGACTG
GAGGTTGATAGTTTGAGTGTGTTCTTACCACCTCCTTTTTCCTTCAATCTTATTTTTGATGAAC
ACATATATAGGAGAACATCTCTCCTATGAATAAGAACCTGGTCATGCTCTA

hide sequence

RefSeq Acc Id:

XM_073020148 ⟹ XP_072876249

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	10	121,474,172 - 121,484,208 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007964912	(Get FASTA)	NCBI Sequence Viewer
	XP_072876249	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000002535.1

RefSeq Acc Id:	XP_007964912 ⟸ XM_007966721
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R1P6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000002535 ⟸ ENSCSAT00000004274

RefSeq Acc Id:	XP_072876249 ⟸ XM_073020148
- Peptide Label:	isoform X2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000006269	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000004274.1	UniProtKB/TrEMBL
InterPro	TRPM	UniProtKB/TrEMBL
	TRPM-like	UniProtKB/TrEMBL
	TRPM_SLOG	UniProtKB/TrEMBL
	YVC1_C	UniProtKB/TrEMBL
NCBI Gene	TRPM8	ENTREZGENE
PANTHER	PTHR13800:SF9	UniProtKB/TrEMBL
	TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6	UniProtKB/TrEMBL
Pfam	LSDAT_euk	UniProtKB/TrEMBL
	TRPM2	UniProtKB/TrEMBL
	YVC1_C	UniProtKB/TrEMBL
UniProt	A0A0D9R1P6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD