LOC103220998 (60S ribosomal protein L10a-like) - Rat Genome Database

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Gene: LOC103220998 (60S ribosomal protein L10a-like) Chlorocebus sabaeus
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Symbol: LOC103220998
Name: 60S ribosomal protein L10a-like
RGD ID: 18590340
Description: ENCODES a protein that exhibits RNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN maturation of LSU-rRNA (inferred); translation (inferred); FOUND IN cytoplasm (inferred); cytosolic large ribosomal subunit (inferred); large ribosomal subunit (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L10a pseudogene
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11442,342,536 - 42,346,405 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604569,532,731 - 69,536,599 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038007675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_038007675   ⟹   XP_037863603
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604569,532,731 - 69,536,599 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037863603 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000018952.1
Reference Protein Sequences
RefSeq Acc Id: XP_037863603   ⟸   XM_038007675
- UniProtKB: A0A0D9SDL3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000019444 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000019534.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.190.20 UniProtKB/TrEMBL
  3.40.50.790 UniProtKB/TrEMBL
InterPro Ribosomal_L1 UniProtKB/TrEMBL
  Ribosomal_L1-like UniProtKB/TrEMBL
  Ribosomal_L1/biogenesis UniProtKB/TrEMBL
  Ribosomal_L1_3-a/b-sand UniProtKB/TrEMBL
  Ribosomal_L1_CS UniProtKB/TrEMBL
NCBI Gene LOC103220998 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L10A UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN L7AE FAMILY MEMBER UniProtKB/TrEMBL
Pfam Ribosomal_L1 UniProtKB/TrEMBL
PIRSF Ribosomal_L1 UniProtKB/TrEMBL
PROSITE RIBOSOMAL_L1 UniProtKB/TrEMBL
Superfamily-SCOP SSF56808 UniProtKB/TrEMBL
UniProt A0A0D9SDL3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103220998  60S ribosomal protein L10a-like  LOC103220998  60S ribosomal protein L10a pseudogene  Symbol and/or name change 5135510 APPROVED