LOC103215917 (zinc finger HIT domain-containing protein 3-like) - Rat Genome Database

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Gene: LOC103215917 (zinc finger HIT domain-containing protein 3-like) Chlorocebus sabaeus
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Symbol: LOC103215917
Name: zinc finger HIT domain-containing protein 3-like
RGD ID: 18585620
Description: ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN box C/D snoRNP assembly (inferred); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (inferred); snoRNA localization (inferred); FOUND IN cytoplasm (inferred); nucleus (inferred); pre-snoRNP complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: zinc finger HIT domain-containing protein 3 pseudogene
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1951,480,808 - 51,482,132 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604811,806,247 - 11,807,106 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038008984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_038008984   ⟹   XP_037864912
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604811,806,247 - 11,807,106 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037864912 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000017968.1
Reference Protein Sequences
RefSeq Acc Id: XP_037864912   ⟸   XM_038008984
- UniProtKB: A0A0D9SAS9 (UniProtKB/TrEMBL),   A0A0D9R135 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000018426 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000018516.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.60.190 UniProtKB/TrEMBL
InterPro Znf_HIT UniProtKB/TrEMBL
  ZNHIT3_C UniProtKB/TrEMBL
NCBI Gene LOC103215917 ENTREZGENE
PANTHER PTHR13483:SF11 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam zf-HIT UniProtKB/TrEMBL
  ZNHIT3_C UniProtKB/TrEMBL
PROSITE ZF_HIT UniProtKB/TrEMBL
Superfamily-SCOP HIT/MYND zinc finger-like UniProtKB/TrEMBL
UniProt A0A0D9R135 ENTREZGENE
  A0A0D9SAS9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103215917  zinc finger HIT domain-containing protein 3-like  LOC103215917  zinc finger HIT domain-containing protein 3 pseudogene  Symbol and/or name change 5135510 APPROVED