ARMH4 (armadillo like helical domain containing 4) - Rat Genome Database

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Gene: ARMH4 (armadillo like helical domain containing 4) Chlorocebus sabaeus
Analyze
Symbol: ARMH4
Name: armadillo like helical domain containing 4
RGD ID: 18517674
Description: ENCODES a protein that exhibits TORC2 complex binding (ortholog); INVOLVED IN regulation of TORC2 signaling (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: armadillo-like helical domain-containing protein 4; C24H14orf37; uncharacterized protein C14orf37 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12435,195,374 - 35,344,585 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2435,196,061 - 35,344,708 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605323,428,549 - 23,584,010 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
ARMH4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12435,195,374 - 35,344,585 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2435,196,061 - 35,344,708 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605323,428,549 - 23,584,010 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ARMH4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381458,000,761 - 58,152,213 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1457,999,735 - 58,298,139 (-)EnsemblGRCh38hg38GRCh38
GRCh371458,467,479 - 58,618,931 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361457,540,561 - 57,688,600 (-)NCBINCBI36Build 36hg18NCBI36
Build 341457,540,560 - 57,688,600NCBI
Celera1438,520,760 - 38,668,792 (-)NCBICelera
Cytogenetic Map14q23.1NCBI
HuRef1438,636,789 - 38,784,667 (-)NCBIHuRef
CHM1_11458,409,339 - 58,557,390 (-)NCBICHM1_1
T2T-CHM13v2.01452,207,688 - 52,359,170 (-)NCBIT2T-CHM13v2.0
Armh4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391449,919,017 - 50,020,843 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1449,913,409 - 50,020,840 (-)EnsemblGRCm39 Ensembl
GRCm381449,681,560 - 49,783,480 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,675,952 - 49,783,383 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,301,694 - 50,403,042 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361448,603,511 - 48,705,279 (-)NCBIMGSCv36mm8
Celera1445,883,049 - 46,001,900 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.78NCBI
Armh4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81525,455,478 - 25,556,569 (-)NCBIGRCr8
mRatBN7.21522,975,895 - 23,076,986 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1522,975,895 - 23,076,949 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1525,753,156 - 25,854,222 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01526,714,490 - 26,815,560 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01524,961,684 - 25,062,756 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01526,586,359 - 26,687,412 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1526,587,179 - 26,678,420 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01530,512,209 - 30,613,262 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41525,680,073 - 25,781,128 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11525,696,592 - 25,796,832 (-)NCBI
Celera1523,343,119 - 23,443,765 (-)NCBICelera
Cytogenetic Map15p14NCBI
Armh4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546611,777,693 - 11,880,257 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546611,771,258 - 11,889,444 (-)NCBIChiLan1.0ChiLan1.0
ARMH4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21559,120,298 - 59,276,345 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11458,336,812 - 58,492,972 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01438,600,338 - 38,746,397 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11456,870,406 - 57,003,380 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1456,870,406 - 57,003,380 (-)Ensemblpanpan1.1panPan2
ARMH4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1833,411,953 - 33,575,083 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl833,412,665 - 33,551,054 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha833,174,352 - 33,336,785 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0833,651,725 - 33,816,624 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl833,651,740 - 33,782,102 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1833,267,316 - 33,429,880 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0833,332,566 - 33,497,069 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0833,707,637 - 33,872,149 (-)NCBIUU_Cfam_GSD_1.0
Armh4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864071,623,762 - 71,738,159 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364952,456,147 - 2,558,354 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364952,452,971 - 2,567,862 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARMH4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1187,103,809 - 187,259,015 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11187,118,498 - 187,259,069 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21208,103,943 - 208,170,315 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Armh4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248843,034,414 - 3,223,161 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248843,027,799 - 3,225,859 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000012551   ⟹   ENSCSAP00000010584
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2435,196,061 - 35,344,708 (-)Ensembl
RefSeq Acc Id: XM_007986802   ⟹   XP_007984993
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12435,195,374 - 35,344,585 (-)NCBI
Vero_WHO_p1.0NW_02366605323,428,549 - 23,571,561 (-)NCBI
Sequence:
RefSeq Acc Id: XM_037984043   ⟹   XP_037839971
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605323,428,549 - 23,584,010 (-)NCBI
Protein Sequences
Protein RefSeqs XP_007984993 (Get FASTA)   NCBI Sequence Viewer  
  XP_037839971 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000010584.1
RefSeq Acc Id: XP_007984993   ⟸   XM_007986802
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RPP5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000010584   ⟸   ENSCSAT00000012551
RefSeq Acc Id: XP_037839971   ⟸   XM_037984043
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RPP5 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000014459 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000012551.1 UniProtKB/TrEMBL
InterPro ARMH4 UniProtKB/TrEMBL
NCBI Gene ARMH4 ENTREZGENE
PANTHER ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 4 UniProtKB/TrEMBL
  PTHR21585 UniProtKB/TrEMBL
Pfam DUF4696 UniProtKB/TrEMBL
UniProt A0A0D9RPP5 ENTREZGENE, UniProtKB/TrEMBL