Advanced Search (OLGA)

Gene: PLOD3 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 3) Chlorocebus sabaeus

Analyze

Symbol:

PLOD3

Name:

procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

RGD ID:

18415812

Description:

ENCODES a protein that exhibits small molecule binding (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH Bone Fragility with Contractures, Arterial Rupture, and Deafness (ortholog); Cerebral Hemorrhage (ortholog); genetic disease (ortholog); FOUND IN collagen-containing extracellular matrix (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	11,962,394 - 11,974,206 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	11,962,286 - 11,975,228 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	4,378,287 - 4,390,520 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bone Fragility with Contractures, Arterial Rupture, and Deafness (ISO)

Cerebral Hemorrhage (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

hypothyroidism (ISO)

Plasminogen Activator Inhibitor-1 Deficiency (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

basement membrane assembly (IEA,ISO)

cellular response to hormone stimulus (ISO)

collagen fibril organization (IEA,ISO)

collagen metabolic process (IEA,ISO)

endothelial cell morphogenesis (IEA,ISO)

epidermis morphogenesis (IEA,ISO)

hydroxylysine biosynthetic process (IEA)

in utero embryonic development (IEA,ISO)

lung morphogenesis (IEA,ISO)

neural tube development (IEA,ISO)

peptidyl-lysine hydroxylation (ISO)

protein localization (IEA,ISO)

protein O-linked glycosylation (IEA)

vasodilation (IEA,ISO)

Cellular Component

collagen-containing extracellular matrix (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

extracellular space (IEA)

Golgi apparatus (IEA)

membrane (IEA)

rough endoplasmic reticulum (IEA)

trans-Golgi network (IEA)

Molecular Function

dioxygenase activity (IEA)

iron ion binding (IEA)

L-ascorbic acid binding (IEA)

metal ion binding (IEA)

procollagen galactosyltransferase activity (IEA)

procollagen glucosyltransferase activity (IEA)

procollagen-lysine 5-dioxygenase activity (IEA)

protein binding (ISO)

small molecule binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PLOD3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	11,962,394 - 11,974,206 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	11,962,286 - 11,975,228 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	4,378,287 - 4,390,520 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

PLOD3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	101,205,984 - 101,217,581 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	101,205,977 - 101,218,420 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	100,849,265 - 100,860,862 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	100,635,978 - 100,647,731 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	100,442,700 - 100,454,303	NCBI
Celera	7	95,858,417 - 95,870,169 (-)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	95,442,117 - 95,454,228 (-)	NCBI		HuRef
CHM1_1	7	100,779,662 - 100,791,414 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	102,529,447 - 102,541,882 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	100,207,645 - 100,219,398 (-)	NCBI

Plod3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	137,015,873 - 137,025,500 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	137,015,873 - 137,025,502 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	136,987,019 - 136,996,646 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	136,987,019 - 136,996,648 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	137,462,889 - 137,472,516 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	137,271,649 - 137,281,166 (+)	NCBI		MGSCv36	mm8
Celera	5	134,003,006 - 134,012,645 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	76.09	NCBI

Plod3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	25,313,070 - 25,323,631 (-)	NCBI		GRCr8
mRatBN7.2	12	19,676,384 - 19,686,945 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	19,676,386 - 19,686,960 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	20,814,848 - 20,825,421 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	21,427,553 - 21,438,126 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	20,492,753 - 20,503,314 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	22,716,421 - 22,726,982 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	22,716,423 - 22,726,982 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	24,728,205 - 24,738,766 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	20,856,527 - 20,867,088 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	20,846,399 - 20,856,690 (+)	NCBI
Celera	12	21,452,299 - 21,462,860 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

Plod3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	16,082,437 - 16,093,389 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	16,082,424 - 16,090,773 (+)	NCBI	ChiLan1.0	ChiLan1.0

PLOD3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	119,219,216 - 119,230,857 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	167,483,838 - 167,495,393 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	93,347,335 - 93,358,921 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	106,587,858 - 106,599,605 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	106,587,858 - 106,599,605 (-)	Ensembl	panpan1.1		panPan2

PLOD3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	8,664,135 - 8,671,637 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	8,664,358 - 8,671,620 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	10,361,502 - 10,368,957 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	8,483,656 - 8,491,120 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	8,483,333 - 8,491,117 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	8,443,884 - 8,451,311 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	8,414,481 - 8,421,939 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	8,579,093 - 8,586,540 (+)	NCBI		UU_Cfam_GSD_1.0

Plod3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	132,939,235 - 132,946,261 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	1,090,253 - 1,097,301 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	1,090,268 - 1,097,170 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLOD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	8,911,791 - 8,919,516 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	8,911,787 - 8,919,525 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Plod3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	16,074,141 - 16,082,223 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	16,074,027 - 16,082,139 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008018465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008018466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000016120 ⟹ ENSCSAP00000014042

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	28	11,962,286 - 11,975,228 (+)	Ensembl

RefSeq Acc Id:

XM_008018465 ⟹ XP_008016656

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	28	11,962,394 - 11,974,206 (+)	NCBI
Vero_WHO_p1.0	NW_023666070	4,378,287 - 4,390,520 (-)	NCBI

Sequence:

show sequence

GCTTCCACATGTGTAAAGTGGGGGGCTCGGCCCAGAGTCCCTGTCTCCCGCCCGCCGGCCCGAG
CTGCCGCCCATCCCCCGCCTCCCGTGCGCCCGGGACAATCCTCGCCTTGTCTGCGGCGCCGGCA
TCTGGAGCTTTCTGCAGCCTCCGGATACGCCTTTTTTCCAGGGCGTGGCCCCAGCCCAGCTGCT
CCCGGCGGCGGCTGCACAGCAGCCCGAGCGCCCCGTTCCCGGAGCTCCCCTCCGGAGCTGGGAT
CCAGGCGCGTAGCTGAGGTCCCAGGATCCTGGGTGCTGTCTGGGCCCGCTCCCCACCATGACCT
CCTCGGGGCCAGGACTCCGGCTCCTGCTGCTGCTGCTGCTGCCTCCTGCGGCCTCAGCCTCCGA
CCGGCCCCGGGGCCGAGACCCAGTCAACCCAGAGAAGCTGCTGGTAATGACTGTGGCCACAGCT
GAAACCGAGGGGTACCTGCGGTTCCTGCGCTCTGCGGAGTTCTTCAACTACACCGTGCGGACCC
TGGGCCTCGGAGAGGAGTGGCGAGGGGGTGATGTGGCCCGAACAGTCGGTGGAGGACAGAAGGT
CCGGTGGCTCAAGAAGGAAATGGAGAAATACGCTGACCGGGAGGATATGATCATCATGTTTGTG
GACAGCTACGATGTGATTCTGGCCGGCAGCCCCTCAGAGCTGCTGAAGAAGTTCGTCCAGAGTG
GCAGCCGCCTGCTGTTCTCTGCGGAGAGCTTCTGCTGGCCCGAGTGGGGGCTGGCGGAGCAGTA
CCCTGAGGTGGGCACGGGGAAGCGCTTCCTCAACTCTGGTGGATTCATCGGCTTTGCCACCACC
ATCCACCAGATCGTGCGCCAGTGGAAATACAAGGATGATGACGATGACCAGCTGTTCTACACGC
GGCTCTACCTGGACCCAGGACTGAGGGAGAAACTCAGCCTTAATCTGGATCATAAGTCTCGGAT
CTTTCAGAACCTCAACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCGT
ATCCGGAATGTGGCCTATGACACGCTCCCCGTTGTGGTCCATGGAAACGGTCCCACTAAGCTGC
AGCTCAACTACCTGGGAAACTACGTCCCCAACGGCTGGACGCCTGAGGGAGGCTGTGGCTTCTG
CAACCGGGACCGGAGGACACTCCCGGGGGGGCAGCCTCCCCCCCGGGTGTTTCTGGCCGTGTTT
GTGGAACAGCCTACTCCGTTTCTGCCCCGCTTCCTGCAGCGGCTGCTGCTCCTGGACTATCCCC
CTGACAGGGTCACCCTTTTTCTGCACAACAACGAGGTCTTCCATGAGCCCCACATCGCTGACTC
CTGGCCACAGCTCCAGGACCACTTCGCAGCTGTGAAGCTGGTAGGGCCGGAGGAGGCTCTGAGC
CCAGGCGAGGCCAGGGACATGGCCATGGACATGTGTCGGCAGGACCTGGAGTGTGAGTTCTACT
TCAGCCTGGACGCTGACGCCGTCCTCACCAACCTGCAGACCCTGCGCATCCTCATTGAGGAGAA
CAGGAAGGTGATCGCCCCCATGCTGTCCCGCCACGGCAAGCTGTGGTCCAACTTCTGGGGCGCC
CTGAGCCCCGATGAGTACTACGCCCGCTCCGAGGACTACGTGGAGCTGGTGCAGCGAAAGCGAG
TGGGCGTGTGGAACGTGCCATACATCTCGCAGGCCTATGTGATCCGGGGGGACACACTGCGGAC
GGAGCTGCCCCAGAGGGACGTGTTCTCGGGCAGTGACACGGACCCGGACATGGCCTTCTGTAAG
AGCTTTCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGG
CCACTTCCCGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGT
CGACTGGAAGGAGCAGTACATCCATGAGAACTACAGCCGGGCCCTGGAAGGGGAGGGAATCGTG
GAGCAGCCATGCCCGGACGTGTACTGGTTCCCACTGCTGTCAGAACAAATGTGTGATGAGCTGG
TGGCGGAGATGGAGCACTATGGCCAGTGGTCAGGCGGCCGGCATGAGGATTCAAGGCTGGCTGG
AGGCTACGAGAATGTGCCCACTGTGGACATCCACATGAAGCAGGTGGGGTACGAGGACCAATGG
CTGCAGCTGCTGCGGACGTATGTGGGCCCCATGACGGAGAGCCTGTTTCCCGGCTACCATACCA
AGGCGCGGGCGGTGATGAACTTTGTGGTTCGCTACCGACCAGATGAGCAGCCATCTCTGCGGCC
ACACCATGACTCATCCACCTTCACCCTCAACGTCGCCCTCAACCACAAAGGCCTGGACTATGAG
GGAGGCGGCTGCCGCTTCCTGCGCTACGACTGCGTGATCTCGTCCCCGAGGAAGGGCTGGGCGC
TCCTGCACCCCGGCCGCCTCACCCACTACCACGAGGGGCTGCCCACGACCCAGGGCACACGCTA
CATCATGGTGTCCTTTGTCGACCCCTGACACTCAACCACTCTGCCAAACCTGCCCTGCCACTGT
GCCTTTTTAGGGGGCTTGGCCCCCATCCTGGGAGTGGGGGGATGGGTCTCTCTCACTCCCCGCT
TCCTGAGTGCATGTTCCGTGTGCCTGGACTGAATATGTCATCTTGCTCCCAACACACGGCCCTC
TCAGGAAGTACCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCATGGGGACAGGGCTT
CTGGGGACTCCCTGTGTGATAAATTATTAATGTTCCTCAGCCTCAGTGCCATTAAAGGACAGTT
TCTAAGTCTTGA

hide sequence

RefSeq Acc Id:

XM_008018466 ⟹ XP_008016657

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	28	11,962,408 - 11,974,206 (+)	NCBI
Vero_WHO_p1.0	NW_023666070	4,378,294 - 4,390,361 (-)	NCBI

Sequence:

show sequence

AAAGTGGGGGGCTCGGCCCAGAGTCCCTGTCTCCCGCCCGCCGGCCCGAGCTGCCGCCCATCCC
CCGCCTCCCGTGCGCCCGGGACAATCCTCGCCTTGTCTGCGGCGCCGGCATCTGGAGCTTTCTG
CAGCCTCCGGATACGCCTTTTTTCCAGGGCGTGGCCCCAGCCCAGCTGCTCCCGGCGGCGGCTG
CACAGCAGCCCGAGCGCCCCGTTCCCGGAGCTCCCCTCCGGAGCTGGGATCCAGGCGCGTAGCT
GAGGTCCCAGGATCCTGGGTGCTGTCTGGGCCCGCTCCCCACCATGACCTCCTCGGGGCCAGGA
CTCCGGCTCCTGCTGCTGCTGCTGCTGCCTCCTGCGGCCTCAGCCTCCGACCGGCCCCGGGGCC
GAGACCCAGTCAACCCAGAGAAGCTGCTGGTAATGACTGTGGCCACAGCTGAAACCGAGGGGTA
CCTGCGGTTCCTGCGCTCTGCGGAGTTCTTCAACTACACCGTGCGGACCCTGGGCCTCGGAGAG
GAGTGGCGAGGGGGTGATGTGGCCCGAACAGTCGGTGGAGGACAGAAGGTCCGGTGGCTCAAGA
AGGAAATGGAGAAATACGCTGACCGGGAGGATATGATCATCATGTTTGTGGACAGCTACGATGT
GATTCTGGCCGGCAGCCCCTCAGAGCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCCGCCTGCTG
TTCTCTGCGGAGAGCTTCTGCTGGCCCGAGTGGGGGCTGGCGGAGCAGTACCCTGAGGTGGGCA
CGGGGAAGCGCTTCCTCAACTCTGGTGGATTCATCGGCTTTGCCACCACCATCCACCAGATCGT
GCGCCAGTGGAAATACAAGGATGATGACGATGACCAGCTGTTCTACACGCGGCTCTACCTGGAC
CCAGGACTGAGGGAGAAACTCAGCCTTAATCTGGATCATAAGTCTCGGATCTTTCAGAACCTCA
ACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCGTATCCGGAATGTGGC
CTATGACACGCTCCCCGTTGTGGTCCATGGAAACGGTCCCACTAAGCTGCAGCTCAACTACCTG
GGAAACTACGTCCCCAACGGCTGGACGCCTGAGGGAGGCTGTGGCTTCTGCAACCGGGACCGGA
GGACACTCCCGGGGGGGCAGCCTCCCCCCCGGGTGTTTCTGGCCGTGTTTGTGGAACAGCCTAC
TCCGTTTCTGCCCCGCTTCCTGCAGCGGCTGCTGCTCCTGGACTATCCCCCTGACAGGGTCACC
CTTTTTCTGCACAACAACGAGGTCTTCCATGAGCCCCACATCGCTGACTCCTGGCCACAGCTCC
AGGACCACTTCGCAGCTGTGAAGCTGGTAGGGCCGGAGGAGGCTCTGAGCCCAGGCGAGGCCAG
GGACATGGCCATGGACATGTGTCGGCAGGACCTGGAGTGTGAGTTCTACTTCAGCCTGGACGCT
GACGCCGTCCTCACCAACCTGCAGACCCTGCGCATCCTCATTGAGGAGAACAGGAAGGTGATCG
CCCCCATGCTGTCCCGCCACGGCAAGCTGTGGTCCAACTTCTGGGGCGCCCTGAGCCCCGATGA
GTACTACGCCCGCTCCGAGGACTACGTGGAGCTGGTGCAGCGAAAGCGAGTGGGCGTGTGGAAC
GTGCCATACATCTCGCAGGCCTATGTGATCCGGGGGGACACACTGCGGACGGAGCTGCCCCAGA
GGGACGTGTTCTCGGGCAGTGACACGGACCCGGACATGGCCTTCTGTAAGAGCTTTCGAGACAA
GGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCCGATAC
GACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGAGC
AGTACATCCATGAGAACTACAGCCGGGCCCTGGAAGGGGAGGGAATCGTGGAGCAGCCATGCCC
GGACGTGTACTGGTTCCCACTGCTGTCAGAACAAATGTGTGATGAGCTGGTGGCGGAGATGGAG
CACTATGGCCAGTGGTCAGGCGGCCGGCATGAGCAGGTGGGGTACGAGGACCAATGGCTGCAGC
TGCTGCGGACGTATGTGGGCCCCATGACGGAGAGCCTGTTTCCCGGCTACCATACCAAGGCGCG
GGCGGTGATGAACTTTGTGGTTCGCTACCGACCAGATGAGCAGCCATCTCTGCGGCCACACCAT
GACTCATCCACCTTCACCCTCAACGTCGCCCTCAACCACAAAGGCCTGGACTATGAGGGAGGCG
GCTGCCGCTTCCTGCGCTACGACTGCGTGATCTCGTCCCCGAGGAAGGGCTGGGCGCTCCTGCA
CCCCGGCCGCCTCACCCACTACCACGAGGGGCTGCCCACGACCCAGGGCACACGCTACATCATG
GTGTCCTTTGTCGACCCCTGACACTCAACCACTCTGCCAAACCTGCCCTGCCACTGTGCCTTTT
TAGGGGGCTTGGCCCCCATCCTGGGAGTGGGGGGATGGGTCTCTCTCACTCCCCGCTTCCTGAG
TGCATGTTCCGTGTGCCTGGACTGAATATGTCATCTTGCTCCCAACACACGGCCCTCTCAGGAA
GTACCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCATGGGGACAGGGCTTCTGGGGA
CTCCCTGTGTGATAAATTATTAATGTTCCTCAGCCTCAGTGCCATTAAAGGACAGTTTCTAAGT
CTTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_008016656	(Get FASTA)	NCBI Sequence Viewer
	XP_008016657	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000014042.1

RefSeq Acc Id:	XP_008016656 ⟸ XM_008018465
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RZK3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008016657 ⟸ XM_008018466
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RZK3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000014042 ⟸ ENSCSAT00000016120

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000018025	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000016120.1	UniProtKB/TrEMBL
Gene3D-CATH	q2cbj1_9rhob like domain	UniProtKB/TrEMBL
InterPro	Collagen_mod_GT25	UniProtKB/TrEMBL
	IPNS-like_FE2OG_OXY	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
	Oxoglu/Fe-dep_dioxygenase	UniProtKB/TrEMBL
	Pro_4_hyd_alph	UniProtKB/TrEMBL
	Procol_lys_dOase	UniProtKB/TrEMBL
KEGG Report	csab:103246688	UniProtKB/TrEMBL
NCBI Gene	PLOD3	ENTREZGENE
PANTHER	MULTIFUNCTIONAL PROCOLLAGEN LYSINE HYDROXYLASE AND GLYCOSYLTRANSFERASE LH3	UniProtKB/TrEMBL
	PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER	UniProtKB/TrEMBL
Pfam	2OG-FeII_Oxy	UniProtKB/TrEMBL
PROSITE	FE2OG_OXY	UniProtKB/TrEMBL
	LYS_HYDROXYLASE	UniProtKB/TrEMBL
SMART	P4Hc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A0A0D9RZK3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM