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Gene: TRPV2 (transient receptor potential cation channel subfamily V member 2) Chlorocebus sabaeus

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Symbol:

TRPV2

Name:

transient receptor potential cation channel subfamily V member 2

RGD ID:

18398159

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); Experimental Arthritis (ortholog); FOUND IN endomembrane system (ortholog); lamellipodium (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	15,226,276 - 15,246,488 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	15,225,554 - 15,244,364 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	5,726,313 - 5,748,264 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Endometrial Neoplasms (ISO)

Experimental Arthritis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (ISO)

calcium ion import across plasma membrane (IEA)

calcium ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

negative regulation of cell population proliferation (ISO)

positive regulation of axon extension (IEA)

positive regulation of calcium ion import (IEA)

positive regulation of cold-induced thermogenesis (IEA)

response to temperature stimulus (IEA,ISO)

transmembrane transport (IEA)

Cellular Component

axon (IEA)

axonal growth cone (IEA)

cell body (IEA)

cell surface (IEA)

endomembrane system (ISO)

growth cone membrane (IEA)

lamellipodium (ISO)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

calcium channel activity (IEA)

identical protein binding (ISO)

monoatomic cation channel activity (IEA)

monoatomic ion channel activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TRPV2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	15,226,276 - 15,246,488 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	15,225,554 - 15,244,364 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	5,726,313 - 5,748,264 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

TRPV2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	16,415,571 - 16,437,003 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	16,415,571 - 16,437,003 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	16,318,885 - 16,340,317 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	16,259,613 - 16,281,042 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	16,259,612 - 16,281,040	NCBI
Celera	17	16,221,759 - 16,243,216 (+)	NCBI		Celera
Cytogenetic Map	17	p11.2	NCBI
HuRef	17	16,185,329 - 16,206,779 (+)	NCBI		HuRef
CHM1_1	17	16,328,475 - 16,349,923 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	16,317,872 - 16,339,304 (+)	NCBI		T2T-CHM13v2.0

Trpv2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	62,465,312 - 62,491,131 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	62,465,312 - 62,491,341 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	62,574,486 - 62,600,305 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	62,574,486 - 62,600,515 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	62,387,988 - 62,413,807 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	62,390,733 - 62,416,491 (+)	NCBI		MGSCv36	mm8
Celera	11	69,494,115 - 69,519,933 (+)	NCBI		Celera
Cytogenetic Map	11	B2	NCBI
cM Map	11	38.48	NCBI

Trpv2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	47,772,223 - 47,797,956 (+)	NCBI		GRCr8
mRatBN7.2	10	47,265,524 - 47,294,263 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	47,272,931 - 47,294,260 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	51,975,970 - 51,997,253 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	51,466,516 - 51,487,799 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	46,969,925 - 46,991,212 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	48,903,540 - 48,925,036 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	48,903,540 - 48,925,030 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	48,686,500 - 48,707,996 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	48,764,894 - 48,786,150 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	48,778,506 - 48,799,767 (+)	NCBI
Celera	10	46,520,118 - 46,541,280 (+)	NCBI		Celera
Cytogenetic Map	10	q23	NCBI

TRPV2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	56,184,883 - 56,211,452 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	61,001,608 - 61,023,202 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	35,329,283 - 35,350,729 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	110,620,793 - 110,642,926 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	110,620,793 - 110,642,926 (+)	Ensembl	panpan1.1		panPan2

TRPV2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	39,488,155 - 39,512,454 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	39,491,484 - 39,509,902 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	39,632,760 - 39,656,359 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	39,596,549 - 39,620,384 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	39,600,757 - 39,620,349 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	39,568,532 - 39,592,119 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	39,513,796 - 39,537,381 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	39,705,961 - 39,729,555 (-)	NCBI		UU_Cfam_GSD_1.0

Trpv2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	59,586,614 - 59,613,898 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936821	198,098 - 226,025 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936821	198,622 - 225,575 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRPV2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	59,135,329 - 59,152,228 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	59,132,529 - 59,152,633 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	62,259,257 - 62,278,900 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Trpv2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624877	4,016,973 - 4,034,495 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624877	4,016,964 - 4,034,522 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TRPV2
470 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008010467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008010468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008010469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000006878 ⟹ ENSCSAP00000005072

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	16	15,225,554 - 15,244,364 (-)	Ensembl

RefSeq Acc Id:

XM_008010467 ⟹ XP_008008658

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	15,226,277 - 15,246,479 (-)	NCBI
Vero_WHO_p1.0	NW_023666059	5,726,314 - 5,748,264 (+)	NCBI

Sequence:

show sequence

TGTGTCCAGATGGTCAGTCTGTGGTGGCTAGCCTGTCCTGACAGGGGAGAGTTAAGCTCCCACT
CTCCACCGTGCCAGCTGGCCAGGTGGGCTAAGGGTGACCCAGAGACCAGAACCTGCTTGCTGGA
GCTCAGTGCTCAGAGCTGGGGAGGGAGGTTCCGCGGCTCCTCCGCTGTCAGCGCCCGCAGCCCC
TCCCCTCTTCACTTCCTCCCGCAGCCCCTGCCACCGAGAAGCTCCAGGATCCCAGCAGCCGCCA
CACCCAGGCTTCAGCCTGCGCAGTAAGTCGGCTCCAGTAAGGCCAACACCGACCCGCAGCTGGG
AGGAAGACGGGACCCTTGACATCTCCATCTCCACAGAGGTCCTGGCTGGACTGAGCAGCCTCCT
CCTCCTAGGATGACCGTACCCCCCAGCTCTCCAGTTTTCAGGCTGGAGACATTAGATGGAGGCC
AAGAAGATGGCGCTGAGGTGGACGAAGTAAAGCCGGCTTTGGGGAGCGGGCTGACTCCCATGGA
GTCACCGTTCCAGGGCGAGGACCGGAAATTCGCCCCTCAGATAAAAGTGAACCTCAAGTATGGA
AAGGGAGCAGGTGCCAGTCAGCCGGATCCAAACCGATTTGACCGAGATCGGCTCTTCAATGCGG
TCTCCCGGGGTGTCCCCGAGGATCTGGCTGGACTTCCAGAGTACCTGTGCAAGACCAGCAAGTA
CCTCACCGACTCGGAATACACAGAGGGCTCCACAGGTAAGACGTGTCTGATGAAGGCTGTGCTG
AATCTTAAGGATGGGGTCAACGCCTGCATTCTGCCGCTGCTGCAGATCGACCGGGACTCTGGCA
ATCCTCAGCCCCTGGTAAATGCCCAGTGTACAGATGACTATTACCGAGGCCACAGCGCTCTGCA
CATCGCCATTGAGAAGAGGAGTCTGCAGTGTGTGAAGCTCCTGGTGGAGAATGGGGCCAATGTG
CATGCCCAGGCCTGTGGCCGCTTCTTCCAGAAGGGCCAAGGGACTTGCTTTTATTTCGGTGAGC
TACCCCTCTCTTTGGCCGCTTGCACCAAGCAATGGGATGTGGTAAGCTACCTCCTGGAGAACCC
ACACCAGCCCGCCAGCCTGCAGGCCACTGACTCCCAGGGCAACACAGTCCTGCATGCCCTAGTG
ATGATCTCAGACAACTCAGCTGAGAACATCGCACTGGTGACCAGCATGTACGATGGGCTCCTCC
AAGCTGGGGCCCGCCTCTGCCCCACCGTGCAGCTTGAGGACATCCGTAACCGGCAGGATCTCAC
ACCTCTGAAGCTGGCCGCCAAGGAGGGCAAGATCGAGATTTTCAGGCACATCCTGCAGCGCGAG
TTTTCAGGACTGAGCCACCTTTCCCGAAAGTTCACTGAGTGGTGCTATGGGCCTGTCCGGGTGT
CGCTGTATGACCTGGCTTCTGTGGACAGCTGTGAGGAGAACTCGGTGCTAGAGATCATCGCCTT
TCATTGCAAGAGTCCGCACCGACACCGAATGGTCGTTTTGGAGCCCCTGAACAAACTGCTGCAG
GCGAAATGGGATCTGCTCATCCCCAGGTTCTTCTTAAACTTCCTGTGTAATCTGATCTACATGT
TCATCTTCACCGCTGTTGCCTACCATCAGCCTGCCCTGAAGAAGCAGGCCGCCGCCCACCCGAA
AGCGGAGGTTGGAAACTCCATGCTGCTGGCAGGCCACATCTTTGTCCTGCTAGCGGGGATCTAC
CTCCTCGTGGGCCAGCTGTGGTACTTCTGGCGGCGCCACCTGTTCATCTGGATGTCGTTCATAG
ACAGCTACTTTGAAATCCTCTTCCTGTTCCAGTCCCTGCTCACAGTGCTGTCCCAGGTGCTATG
TTTCCTGGCCATCGAGTGGTACCTGCCCCTGCTTGTGTCTGCGCTGGTGCTGGGCTGGCTGAAC
CTGCTTTACTATACACGTGGCTTCCAGCACACAGGCATCTACAGTGTCATGATCCAGAAGGTCA
TCCTGCGGGACCTGCTGCGCTTCCTTCTGATCTACTTAGTCTTCCTTTTCGGCTTCGCTGTAGC
CCTGGTGAGCCTGAGCCAGGAGGCTTGGCGTCCCGAAGCTCCTACAGGCCCCAATGTCACAGAG
TTGGTGCAGCCCGTGGAGGGACAGGAGGATGAGGGCAACAGGGCTCCGTACAGGGGTATCCTGG
AAGCCTCCTTGGAGCTCTTCAAATTCACCATCGGCATGGGCGAGCTGGCCTTCCAGGAACAGCT
GCACTTCCGTGGCATGGTGCTGCTGCTGCTGCTGGCCTACGTGCTGCTCACCTACATCCTGCTG
CTCAACATGCTCATCGCCCTCATGAGCGAGACCGTCAACAGTGTCGCCACTGACAGCTGGAGCA
TCTGGAAGCTGCAGAAAGCCATCTCTGTCCTGGAGATGGAGAATGGCTATTGGTGGTGCAGGAA
GAAGCAGCAGCGGGCAGGCGTGATGCTGACCGTCGGCACTAAGCCAGATGGCAGCGCCGATGAG
CGCTGGTGCTTCAGGGTGGAGGAGGTGAACTGGGCTTCGTGGGAGCAGACGCTGCCTACGCTGT
GTGAGGACCCGTCAGGGGCAGGCGTCCCTCGAACTCTCAAGAACCCTGTCCTGGCTTCCCCACC
CAAGGATGAAGATGGTGCCTCTGAGGAAGACCATGTGCCCCTCAAGCCTCTCCAGTCCAACTGA
TGGCCCAGATGCAGCAGGAGGCTAGAGGACACAGCAGGGGATATTTCCAGCCACATCTGCTGGC
TCTGGGGTCCCAGTGAATTCTGGTGGCAAATATATATTTTCACTAAC

hide sequence

RefSeq Acc Id:

XM_008010468 ⟹ XP_008008659

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	15,226,276 - 15,246,488 (-)	NCBI
Vero_WHO_p1.0	NW_023666059	5,726,314 - 5,748,264 (+)	NCBI

Sequence:

show sequence

GCAGCAGGGTGTGTCCAGATGGTCAGTCTGTGGTGGCTAGCCTGTCCTGACAGGGGAGAGTTAA
GCTCCCACTCTCCACCGTGCCAGCTGGCCAGGTGGGCTAAGGGTGACCCAGAGACCAGAACCTG
CTTGCTGGAGCTCAGTGCTCAGAGCTGGGGAGGGAGGTTCCGCGGCTCCTCCGCTGTCAGCGCC
CGCAGCCCCTCCCCTCTTCACTTCCTCCCGCAGCCCCTGCCACCGAGAAGCTCCAGGATCCCAG
CAGCCGCCACACCCAGGCTTCAGCCTGCGCAGCTCCAGTAAGGCCAACACCGACCCGCAGCTGG
GAGGAAGACGGGACCCTTGACATCTCCATCTCCACAGAGGTCCTGGCTGGACTGAGCAGCCTCC
TCCTCCTAGGATGACCGTACCCCCCAGCTCTCCAGTTTTCAGGCTGGAGACATTAGATGGAGGC
CAAGAAGATGGCGCTGAGGTGGACGAAGTAAAGCCGGCTTTGGGGAGCGGGCTGACTCCCATGG
AGTCACCGTTCCAGGGCGAGGACCGGAAATTCGCCCCTCAGATAAAAGTGAACCTCAAGTATGG
AAAGGGAGCAGGTGCCAGTCAGCCGGATCCAAACCGATTTGACCGAGATCGGCTCTTCAATGCG
GTCTCCCGGGGTGTCCCCGAGGATCTGGCTGGACTTCCAGAGTACCTGTGCAAGACCAGCAAGT
ACCTCACCGACTCGGAATACACAGAGGGCTCCACAGGTAAGACGTGTCTGATGAAGGCTGTGCT
GAATCTTAAGGATGGGGTCAACGCCTGCATTCTGCCGCTGCTGCAGATCGACCGGGACTCTGGC
AATCCTCAGCCCCTGGTAAATGCCCAGTGTACAGATGACTATTACCGAGGCCACAGCGCTCTGC
ACATCGCCATTGAGAAGAGGAGTCTGCAGTGTGTGAAGCTCCTGGTGGAGAATGGGGCCAATGT
GCATGCCCAGGCCTGTGGCCGCTTCTTCCAGAAGGGCCAAGGGACTTGCTTTTATTTCGGTGAG
CTACCCCTCTCTTTGGCCGCTTGCACCAAGCAATGGGATGTGGTAAGCTACCTCCTGGAGAACC
CACACCAGCCCGCCAGCCTGCAGGCCACTGACTCCCAGGGCAACACAGTCCTGCATGCCCTAGT
GATGATCTCAGACAACTCAGCTGAGAACATCGCACTGGTGACCAGCATGTACGATGGGCTCCTC
CAAGCTGGGGCCCGCCTCTGCCCCACCGTGCAGCTTGAGGACATCCGTAACCGGCAGGATCTCA
CACCTCTGAAGCTGGCCGCCAAGGAGGGCAAGATCGAGATTTTCAGGCACATCCTGCAGCGCGA
GTTTTCAGGACTGAGCCACCTTTCCCGAAAGTTCACTGAGTGGTGCTATGGGCCTGTCCGGGTG
TCGCTGTATGACCTGGCTTCTGTGGACAGCTGTGAGGAGAACTCGGTGCTAGAGATCATCGCCT
TTCATTGCAAGAGTCCGCACCGACACCGAATGGTCGTTTTGGAGCCCCTGAACAAACTGCTGCA
GGCGAAATGGGATCTGCTCATCCCCAGGTTCTTCTTAAACTTCCTGTGTAATCTGATCTACATG
TTCATCTTCACCGCTGTTGCCTACCATCAGCCTGCCCTGAAGAAGCAGGCCGCCGCCCACCCGA
AAGCGGAGGTTGGAAACTCCATGCTGCTGGCAGGCCACATCTTTGTCCTGCTAGCGGGGATCTA
CCTCCTCGTGGGCCAGCTGTGGTACTTCTGGCGGCGCCACCTGTTCATCTGGATGTCGTTCATA
GACAGCTACTTTGAAATCCTCTTCCTGTTCCAGTCCCTGCTCACAGTGCTGTCCCAGGTGCTAT
GTTTCCTGGCCATCGAGTGGTACCTGCCCCTGCTTGTGTCTGCGCTGGTGCTGGGCTGGCTGAA
CCTGCTTTACTATACACGTGGCTTCCAGCACACAGGCATCTACAGTGTCATGATCCAGAAGGTC
ATCCTGCGGGACCTGCTGCGCTTCCTTCTGATCTACTTAGTCTTCCTTTTCGGCTTCGCTGTAG
CCCTGGTGAGCCTGAGCCAGGAGGCTTGGCGTCCCGAAGCTCCTACAGGCCCCAATGTCACAGA
GTTGGTGCAGCCCGTGGAGGGACAGGAGGATGAGGGCAACAGGGCTCCGTACAGGGGTATCCTG
GAAGCCTCCTTGGAGCTCTTCAAATTCACCATCGGCATGGGCGAGCTGGCCTTCCAGGAACAGC
TGCACTTCCGTGGCATGGTGCTGCTGCTGCTGCTGGCCTACGTGCTGCTCACCTACATCCTGCT
GCTCAACATGCTCATCGCCCTCATGAGCGAGACCGTCAACAGTGTCGCCACTGACAGCTGGAGC
ATCTGGAAGCTGCAGAAAGCCATCTCTGTCCTGGAGATGGAGAATGGCTATTGGTGGTGCAGGA
AGAAGCAGCAGCGGGCAGGCGTGATGCTGACCGTCGGCACTAAGCCAGATGGCAGCGCCGATGA
GCGCTGGTGCTTCAGGGTGGAGGAGGTGAACTGGGCTTCGTGGGAGCAGACGCTGCCTACGCTG
TGTGAGGACCCGTCAGGGGCAGGCGTCCCTCGAACTCTCAAGAACCCTGTCCTGGCTTCCCCAC
CCAAGGATGAAGATGGTGCCTCTGAGGAAGACCATGTGCCCCTCAAGCCTCTCCAGTCCAACTG
ATGGCCCAGATGCAGCAGGAGGCTAGAGGACACAGCAGGGGATATTTCCAGCCACATCTGCTGG
CTCTGGGGTCCCAGTGAATTCTGGTGGCAAATATATATTTTCACTAACT

hide sequence

RefSeq Acc Id:

XM_008010469 ⟹ XP_008008660

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	15,226,277 - 15,246,479 (-)	NCBI
Vero_WHO_p1.0	NW_023666059	5,726,313 - 5,748,264 (+)	NCBI

Sequence:

show sequence

TGTGTCCAGATGGTCAGTCTGTGGTGGCTAGCCTGTCCTGACAGGGGAGAGTTAAGCTCCCACT
CTCCACCGTGCCAGCTGGCCAGGTGGGCTAAGGGTGACCCAGAGACCAGAACCTGCTTGCTGGA
GCTCAGTGCTCAGAGCTGGGGAGGGAGGTTCCGCGGCTCCTCCGCTGTCAGCGCCCGCAGCCCC
TCCCCTCTTCACTTCCTCCCGCAGCCCCTGCCACCGAGAAGCTCCAGGATCCCAGCAGCCGCCA
CACCCAGGCTTCAGCCTGCGCAGTAAGTCGGCTCCAGTAAGGCCAACACCGACCCGCAGCTGGG
AGGAAGACGGGACCCTTGACATCTCCATCTCCACAGAGGTCCTGGCTGGACTGAGCAGCCTCCT
CCTCCTAGGATGACCGTACCCCCCAGCTCTCCAGTTTTCAGGCTGGAGACATTAGATGGAGGCC
AAGAAGATGGCGCTGAGGTGGACGAAGTAAAGCCGGCTTTGGGGAGCGGGCTGACTCCCATGGA
GTCACCGTTCCAGGGCGAGGACCGGAAATTCGCCCCTCAGATAAAAGTGAACCTCAAGTATGGA
AAGGGAGCAGGTGCCAGTCAGCCGGATCCAAACCGATTTGACCGAGATCGGCTCTTCAATGCGG
TCTCCCGGGGTGTCCCCGAGGATCTGGCTGGACTTCCAGAGTACCTGTGCAAGACCAGCAAGTA
CCTCACCGACTCGGAATACACAGAGGGCTCCACAGGTAAGACGTGTCTGATGAAGGCTGTGCTG
AATCTTAAGGATGGGGTCAACGCCTGCATTCTGCCGCTGCTGCAGATCGACCGGGACTCTGGCA
ATCCTCAGCCCCTGGTAAATGCCCAGTGTACAGATGACTATTACCGAGGCCACAGCGCTCTGCA
CATCGCCATTGAGAAGAGGAGTCTGCAGTGTGTGAAGCTCCTGGTGGAGAATGGGGCCAATGTG
CATGCCCAGGCCTGTGGCCGCTTCTTCCAGAAGGGCCAAGGGACTTGCTTTTATTTCGGTGAGC
TACCCCTCTCTTTGGCCGCTTGCACCAAGCAATGGGATGTGGTAAGCTACCTCCTGGAGAACCC
ACACCAGCCCGCCAGCCTGCAGGCCACTGACTCCCAGGGCAACACAGTCCTGCATGCCCTAGTG
ATGATCTCAGACAACTCAGCTGAGAACATCGCACTGGTGACCAGCATGTACGATGGGCTCCTCC
AAGCTGGGGCCCGCCTCTGCCCCACCGTGCAGCTTGAGGACATCCGTAACCGGCAGGATCTCAC
ACCTCTGAAGCTGGCCGCCAAGGAGGGCAAGATCGAGATTTTCAGGCACATCCTGCAGCGCGAG
TTTTCAGGACTGAGCCACCTTTCCCGAAAGTTCACTGAGTGGTGCTATGGGCCTGTCCGGGTGT
CGCTGTATGACCTGGCTTCTGTGGACAGCTGTGAGGAGAACTCGGTGCTAGAGATCATCGCCTT
TCATTGCAAGAGTCCGCACCGACACCGAATGGTCGTTTTGGAGCCCCTGAACAAACTGCTGCAG
GCGAAATGGGATCTGCTCATCCCCAGGTTCTTCTTAAACTTCCTGTGTAATCTGATCTACATGT
TCATCTTCACCGCTGTTGCCTACCATCAGCCTGCCCTGAAGAAGGCCGCCGCCCACCCGAAAGC
GGAGGTTGGAAACTCCATGCTGCTGGCAGGCCACATCTTTGTCCTGCTAGCGGGGATCTACCTC
CTCGTGGGCCAGCTGTGGTACTTCTGGCGGCGCCACCTGTTCATCTGGATGTCGTTCATAGACA
GCTACTTTGAAATCCTCTTCCTGTTCCAGTCCCTGCTCACAGTGCTGTCCCAGGTGCTATGTTT
CCTGGCCATCGAGTGGTACCTGCCCCTGCTTGTGTCTGCGCTGGTGCTGGGCTGGCTGAACCTG
CTTTACTATACACGTGGCTTCCAGCACACAGGCATCTACAGTGTCATGATCCAGAAGGTCATCC
TGCGGGACCTGCTGCGCTTCCTTCTGATCTACTTAGTCTTCCTTTTCGGCTTCGCTGTAGCCCT
GGTGAGCCTGAGCCAGGAGGCTTGGCGTCCCGAAGCTCCTACAGGCCCCAATGTCACAGAGTTG
GTGCAGCCCGTGGAGGGACAGGAGGATGAGGGCAACAGGGCTCCGTACAGGGGTATCCTGGAAG
CCTCCTTGGAGCTCTTCAAATTCACCATCGGCATGGGCGAGCTGGCCTTCCAGGAACAGCTGCA
CTTCCGTGGCATGGTGCTGCTGCTGCTGCTGGCCTACGTGCTGCTCACCTACATCCTGCTGCTC
AACATGCTCATCGCCCTCATGAGCGAGACCGTCAACAGTGTCGCCACTGACAGCTGGAGCATCT
GGAAGCTGCAGAAAGCCATCTCTGTCCTGGAGATGGAGAATGGCTATTGGTGGTGCAGGAAGAA
GCAGCAGCGGGCAGGCGTGATGCTGACCGTCGGCACTAAGCCAGATGGCAGCGCCGATGAGCGC
TGGTGCTTCAGGGTGGAGGAGGTGAACTGGGCTTCGTGGGAGCAGACGCTGCCTACGCTGTGTG
AGGACCCGTCAGGGGCAGGCGTCCCTCGAACTCTCAAGAACCCTGTCCTGGCTTCCCCACCCAA
GGATGAAGATGGTGCCTCTGAGGAAGACCATGTGCCCCTCAAGCCTCTCCAGTCCAACTGATGG
CCCAGATGCAGCAGGAGGCTAGAGGACACAGCAGGGGATATTTCCAGCCACATCTGCTGGCTCT
GGGGTCCCAGTGAATTCTGGTGGCAAATATATATTTTCACTAAC

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Protein Sequences


Protein RefSeqs	XP_008008658	(Get FASTA)	NCBI Sequence Viewer
	XP_008008659	(Get FASTA)	NCBI Sequence Viewer
	XP_008008660	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005072
	ENSCSAP00000005072.1

RefSeq Acc Id:	XP_008008659 ⟸ XM_008010468
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R8Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008008660 ⟸ XM_008010469
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008008658 ⟸ XM_008010467
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R8Y3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000005072 ⟸ ENSCSAT00000006878

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000008822	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000006878.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	Ion_trans_dom	UniProtKB/TrEMBL
	TRPV	UniProtKB/TrEMBL
	TRPV1-4_channel	UniProtKB/TrEMBL
KEGG Report	csab:103242446	UniProtKB/TrEMBL
NCBI Gene	TRPV2	ENTREZGENE
PANTHER	PTHR10582	UniProtKB/TrEMBL
	PTHR10582:SF5	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	Ion_trans	UniProtKB/TrEMBL
PRINTS	TRPVRECEPTOR	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	A0A0D9R8Y3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD