SLC28A2 (solute carrier family 28 member 2) - Rat Genome Database

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Gene: SLC28A2 (solute carrier family 28 member 2) Chlorocebus sabaeus
Analyze
Symbol: SLC28A2
Name: solute carrier family 28 member 2
RGD ID: 18358378
Description: ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); nucleoside transmembrane transporter activity (ortholog); nucleoside:sodium symporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); inosine transport (ortholog); neurotransmitter transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH AGAT deficiency (ortholog); Bloom syndrome (ortholog); colorectal cancer (ortholog); FOUND IN apicolateral plasma membrane (ortholog); brush border membrane (ortholog); coated vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sodium/nucleoside cotransporter 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12637,927,200 - 37,956,729 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048103,107,096 - 103,134,707 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC28A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12637,927,200 - 37,956,729 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048103,107,096 - 103,134,707 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SLC28A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381545,252,234 - 45,277,846 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1545,252,234 - 45,277,846 (+)EnsemblGRCh38hg38GRCh38
GRCh371545,544,432 - 45,570,044 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361543,331,726 - 43,355,425 (+)NCBINCBI36Build 36hg18NCBI36
Build 341543,331,725 - 43,355,425NCBI
Celera1522,435,715 - 22,459,420 (+)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1522,368,444 - 22,392,157 (+)NCBIHuRef
CHM1_11545,662,894 - 45,686,614 (+)NCBICHM1_1
T2T-CHM13v2.01543,060,158 - 43,086,086 (+)NCBIT2T-CHM13v2.0
Slc28a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392122,256,836 - 122,291,633 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2122,256,958 - 122,291,618 (+)EnsemblGRCm39 Ensembl
GRCm382122,426,357 - 122,461,152 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2122,426,477 - 122,461,137 (+)EnsemblGRCm38mm10GRCm38
MGSCv372122,252,213 - 122,286,866 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362122,117,918 - 122,152,571 (+)NCBIMGSCv36mm8
Celera2123,576,831 - 123,613,534 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map260.63NCBI
Slc28a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83129,778,425 - 129,841,292 (+)NCBIGRCr8
mRatBN7.23109,324,815 - 109,387,702 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3109,366,996 - 109,387,702 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3113,039,238 - 113,060,743 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03121,634,754 - 121,656,259 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03119,295,132 - 119,316,637 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03114,355,003 - 114,647,382 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,355,798 - 114,647,382 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03120,897,082 - 120,921,371 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43109,350,531 - 109,372,027 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13109,256,103 - 109,277,600 (-)NCBI
Celera3108,262,866 - 108,284,103 (+)NCBICelera
Cytogenetic Map3q35NCBI
Slc28a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554098,144,304 - 8,175,360 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554098,145,723 - 8,175,256 (-)NCBIChiLan1.0ChiLan1.0
SLC28A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21634,491,976 - 34,519,267 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11538,670,150 - 38,697,435 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01524,199,846 - 24,223,378 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11542,554,204 - 42,577,891 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1542,554,142 - 42,578,096 (+)Ensemblpanpan1.1panPan2
Slc28a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864090,088,338 - 90,119,863 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364717,937,490 - 7,967,568 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364717,937,490 - 7,967,568 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC28A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1126,472,525 - 126,511,095 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11126,472,500 - 126,511,207 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21141,072,725 - 141,110,169 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Slc28a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473113,998,505 - 14,025,732 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473113,999,029 - 14,051,964 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038009943   ⟹   XP_037865871
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048103,107,096 - 103,134,707 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037865871 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037865871   ⟸   XM_038009943


Additional Information

Database Acc Id Source(s)
NCBI Gene SLC28A2 ENTREZGENE