AC097522.1 (metallophosphoesterase 1 (MPPE1) pseudogene) - Rat Genome Database

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Gene: AC097522.1 (metallophosphoesterase 1 (MPPE1) pseudogene) Homo sapiens
Analyze
Symbol: AC097522.1
Name: metallophosphoesterase 1 (MPPE1) pseudogene
RGD ID: 16559194
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: LOC100419861; metallophosphoesterase 1 pseudogene
Related Functional Gene: MPPE1  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38452,440,509 - 52,441,535 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl452,440,494 - 52,441,535 (-)EnsemblGRCh38hg38GRCh38
GRCh37453,306,675 - 53,307,701 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map4q12NCBI
HuRef449,248,850 - 49,249,876 (-)NCBIHuRef
CHM1_1453,342,317 - 53,343,343 (-)NCBICHM1_1
T2T-CHM13v2.0455,927,363 - 55,928,389 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in AC097522.1
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:83
Interacting mature miRNAs:83
Transcripts:ENST00000507811
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 317 2 1 1 1 126 267 126 2 3 2 125
Below cutoff 287 711 187 23 91 9 700 417 1167 36 334 190 14 70 599 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000507811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl452,440,494 - 52,441,535 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC097522.1 COSMIC
Ensembl Genes ENSG00000251286 Ensembl, ENTREZGENE
GTEx ENSG00000251286 GTEx
Human Proteome Map AC097522.1 Human Proteome Map
NCBI Gene LOC100419861 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AC097522.1  metallophosphoesterase 1 (MPPE1) pseudogene  LOC100419861  metallophosphoesterase 1 pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC100419861  metallophosphoesterase 1 pseudogene  AC097522.1  metallophosphoesterase 1 (MPPE1) pseudogene  Symbol and/or name change 5135510 APPROVED