RPL6P11 (ribosomal protein L6 pseudogene 11) - Rat Genome Database

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Gene: RPL6P11 (ribosomal protein L6 pseudogene 11) Homo sapiens
Analyze
Symbol: RPL6P11
Name: ribosomal protein L6 pseudogene 11
RGD ID: 16558884
HGNC Page HGNC:55893
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: AC017037.2; ribosomal protein L6 (RPL6) pseudogene; ribosomal protein L6 pseudogene
Related Functional Gene: RPL6  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384157,968,392 - 157,969,562 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4157,968,412 - 157,969,615 (-)EnsemblGRCh38hg38GRCh38
GRCh374158,889,544 - 158,890,714 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map4q32.1NCBI
HuRef4154,639,651 - 154,640,821 (-)NCBIHuRef
CHM1_14158,866,641 - 158,867,810 (-)NCBICHM1_1
T2T-CHM13v2.04161,314,164 - 161,315,334 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:9847074  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:34
Interacting mature miRNAs:34
Transcripts:ENST00000513850
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 1 4 2 9 2 2 1 6 2 5 6 2
Below cutoff 95 294 310 53 57 52 315 84 430 70 390 165 5 60 244

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000513850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4157,968,412 - 157,969,615 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL6P11 COSMIC
Ensembl Genes ENSG00000250475 Ensembl, ENTREZGENE
GTEx ENSG00000250475 GTEx
HGNC ID HGNC:55893 ENTREZGENE
Human Proteome Map RPL6P11 Human Proteome Map
NCBI Gene RPL6P11 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-10-04 RPL6P11  ribosomal protein L6 pseudogene 11  AC017037.2  ribosomal protein L6 (RPL6) pseudogene  Symbol and/or name change 19259463 PROVISIONAL
2020-06-25 AC017037.2  ribosomal protein L6 (RPL6) pseudogene  RPL6P11  ribosomal protein L6 pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 RPL6P11  ribosomal protein L6 pseudogene  AC017037.2  ribosomal protein L6 (RPL6) pseudogene  Symbol and/or name change 5135510 APPROVED