Symbol: |
AC092384.1 |
Name: |
novel transcript, antisense to CBFA2T3 |
RGD ID: |
16551567 |
Description: |
ASSOCIATED WITH Autism; autistic disorder; KBG syndrome |
Type: |
ncrna (Ensembl: lncRNA)
|
RefSeq Status: |
VALIDATED |
Previously known as: |
LOC100129697; uncharacterized LOC100129697 |
RGD Orthologs |
|
Alliance Orthologs |
|
More Info |
more info ...
|
More Info |
|
Allele / Splice: |
See ClinVar data |
Latest Assembly: |
GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 16 | 88,939,271 - 88,953,782 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 88,939,789 - 88,951,524 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 89,005,679 - 89,020,190 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 16 | q24.3 | NCBI | | | | | HuRef | 16 | 74,704,050 - 74,715,097 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 90,417,049 - 90,429,225 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 95,016,690 - 95,031,162 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
AC092384.1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 16 | 88,939,271 - 88,953,782 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 88,939,789 - 88,951,524 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 89,005,679 - 89,020,190 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 16 | q24.3 | NCBI | | | | | HuRef | 16 | 74,704,050 - 74,715,097 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 90,417,049 - 90,429,225 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 95,016,690 - 95,031,162 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
LOC117976169 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 18 | 98,719,607 - 98,733,604 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 104,631,770 - 104,645,737 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 69,660,447 - 69,672,129 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
|
.
Predicted Target Of
Count of predictions: | 191 | Count of miRNA genes: | 165 | Interacting mature miRNAs: | 170 | Transcripts: | ENST00000378347, ENST00000593752 | Prediction methods: | Microtar, Miranda, Rnahybrid | Result types: | miRGate_prediction |
|
alimentary part of gastrointestinal system
| | | | | |
entire extraembryonic component
| | | | | | | | | | | | |
1203
|
2294
|
2676
|
2088
|
4617
|
1496
|
1925
|
1
|
417
|
1840
|
256
|
2023
|
6572
|
6149
|
14
|
3610
|
703
|
1524
|
1408
|
162
|
Ensembl Acc Id: |
ENST00000378347 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 16 | 88,939,789 - 88,951,524 (+) | Ensembl |
|
RefSeq Acc Id: |
NR_168285 |
RefSeq Status: |
VALIDATED |
Type: |
NON-CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38 | 16 | 88,939,271 - 88,953,782 (+) | NCBI | T2T-CHM13v2.0 | 16 | 95,016,690 - 95,031,162 (+) | NCBI |
|
Sequence: |
ACTCACCAGCCCTGGCTTCACAGGTGGTGACAGCACGGCCCCAGCACCACGAACCACTCATGTGAACTTCCCTTCTCCCCTGTCACTAGAGGATCCCAGCACATCCCAGGAGAGATGGAGCCTGCCGG AAGACTGATCCTGATGCGACACTCTCTTCCCTCCCTGAGCCCCAATCTCGGGTGGAGGCCACATCTGTTCCTCCTGCTCTGGGCGCTTCTTCCTTTCTGTTTCCCTTTCAGTGTGGAAGAGTGGCCGC TTGCCCAGCAGGACGGTCCCAAATAGCATGGCTTTTCCAGGCACGGTGCTGTCGGCCGCACAGAACAGGACCCTCCCGGCAGCTCCGGCTTGCACAGCATCCGCCTGTCTGGCCCCTGTGGAAGTATC TGACTCCCAACGCCCAGACTGGAGCGGGGGCAAAGGACACAGCCCGACCCCAGAGGCACACAGAGCCAGCCCTCCACGGAAGAACGTGCCCAGGAACTGTGGGCTGGGCCTTCCTGCCTCCTCCCCTG CCGCGAAAGCGATGCCAGGGGCAGGTGAGGGTCGGACGCGCTCAGGCCCAGCCCTCGCCCCTTCAGGTCTGGGGGACACAGTGGAGTCCCAGCCTCAAGAAGTTTCCCCAACCTCTCAGAAACTTGAA GGGCAATGCCAGGTACCGAAAAACCGGCCCCCGCCCCTTATCCCCGGCCGACCCGTCCGCCGAGGTGGCTGCCCTGGGAACCTCCTGTTCCTCGTCCAGGAGAGGAAACGCACACCCGGGCCGGACGC ACAGAAGCCGCACCCTGGCTGGGGCCACAAGCCTGACAGCTACCGACAAGCCCCCACCCACAGGAGCACGCGACGTGCTCTCTTTTCAAGGGAAAGGTTTTTCTTCCTGGGCCCTGGAATGGGCCTGA AGTCAGCCGGCCTCAGCCCACAGGGTGAATGAGGGGTGGGCACAGCCCGGCCGCGGCCCCAGCACACACGGGCGGACGCAGGGGCGGGGGAGCGCCAGCCCCGCAGTGTGTTCGGAGCCCAGCGGCTC TGAGTCGCCGCCACCAGCCTGGCCGCCTTCTGCTCCACGTCTGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGGTCAGTTCACCCGTCCCCTGGAC CGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGGTCAGTTCACCCGTCCCCTGGACCGGCACCGGCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCCTCCC CCGGACCGGCACCGCCACAGAGGGTCAGGAGTGTTGGCACCTGTCTTCCGGGTCAGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGGAGTGTTGGCACCTGTCTTCCGGATCTGTTCA CCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATC TGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCTGTCTTC CGGATCTGTTCACCCCTCCCCTGGATCGGCACCGGCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCGTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTGGCACCT GTCTTCCGGATCTGTTCACCCCTCGCCTGGACCGGCACCGGCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCCTCCCCTGGACCGGCACCGCCACAGAGGGTCAGAGTGTTG GCACCTGTCTTCCGGATCTGTTCACCCCTCCCCTGGATCGGCACCGGCACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGATCTGTTCACCCGTCCCCTGGACCGGCACCGGCACAGAGGGTCAGA GTGTTGGCACCTGTCTTCCGGGTCTGTTCACCCGTCCCCTGGACTGGCACCAGCACAGAGGGTCGAGTGTTGGCACCTGTCTTCTGGGTCTCCATCCCTCCCTTTGTTTGTTGAGTGACTGCATGTTC TCATTTCCTTATCATACAATTCTTTGAGAGGTATCATTAGCTGCGTCTTATTTTATTTTCACCTTCTTTTCTGTTACCTGTATGTTTGAATTTTCCTATAAGTATTTTTGTTTCATCTTTGCTTTTTT AAATTAAAAAATCAGTTTTAAAATTGCACCTGCAGTACAAAATCAGGGTGGCGACCGGGTTGCTGCCATTCCCTCCCCTCGGGTCTGTGGCTTCTCAGCTCCAGCTCGGGTCACAGACCTGCTGCCAC GGCCCCAGGGTGGGCACAGGGCTAGCAGGACAGTCATGCAGGCAGCCGCGGCCCCAGCGATTGGTCCAGGAGGAGGGCAGGTGACCACACGCGGCCAATCACAATCCTTCCCTGGGAGTTTTTGAACT GGAACAAGAGAGGAAGGACCTCTTCTTTGATCTGCGTGGGAGGCAAGCCCAGAGTGGCCTGGACAGCCGCTGGGAAGAGAAGGTGGGCAGAGCGGCGGAGGGTGTGCTAATGGTTGGGTCTGTGGGGC CTGAAACCGGTGCCCCTGCCCATCCTATAGTTTGGTGCTTGAGCCAGCACAGTCCCAGGTGTCCCTGACGCCTCCGAGCTGGGTTTCTGTCACTCGCAGCTGCAGCATTCTGGCACAGACCCTTGGCC CAGGACCCCTGTGCAGAGGTGGGTTTGGGTCTCCCCGGCCCCAGCAGCCCCAGGAGCCTGTGAGATCTAAGCCGGAAGCTGCTCTGGGCACCTGAGTGCTGACAGCCCGAGTGATGGGAACAGGCTCG CTACTATGCAGAGACAGAGAGACTAATTTTTATCAGCCAGATACCTGGCCAGGCCCCAGGGTGGACAATCTCCAAACCGCATGCATCCCGGCACTGACAAAGCCGTCTATCATTGCTGGAGCCAGGAC ACCCGGGGAGGCTGTGCCAGGCCACGGGGTGAGGGAGCTGCCTCCCTCCAGTCCTTCTCCCGTGGGGCACTGAGACGGCTTTCAGCAAGACAAATGCCCAGGCCACAGGGTGAGGGAGCTGCCGCCCT CCAATCCTTCTCCCGCGGGGCACCAAAATGGCTTTCAGCAGGACAAATGCCCAGGCCATGGGGTGAGGGAGTTGCCGCCCTCCAGTCCTTCTCCCACGGGGCACCGAGACGGCTTTCAGCAAGACAAA TGCGGCCCTGCCACTCCCTGACCGAGATAAAGTCTCAGCTCCTGAGCCTGGGGTGCCTGCTGCTCGCCCCCATCGCCTCTCTGAGCTCCAGCCTCACAGGCACACACCGCTCCCCTGCCCAGAACATT CTGCCCACAAACTCCTCTTAGCCTCAGGTCCCTGCTGAGTGGCCATTCCTGCTGGGAGGCAGGAATTCCCTGATCTACCCTTCCTGAGTCTGGGAGAGACGCCTCCCATACCCCCATGACAGCCCATC ACAATTGTTCACGGATCTCTGTGTTCTCCCTCAACAAATACTTGGCGGACCCCCTGGAGCCACAGCTCAAGGCTTCCTTCCCCCCCACCCCCACACCCTGGGGACAGCATGTCCAGGACCCCCACGCA GGGCCTGTGTCGAGACGGCATGTCCAGGACCCCCACGCAGGGCCTGTGTCGAGACGGCATGTCCAGGACCCCCACGCAGGGCCTGTGTCGAGACGGCATGTCCCGCCATCGGGTTTGCTGCTGAATGA GCAGATGATCTAATGAGTGACCGTCCTCACCCACGAGAAAAAACACAACCTGGTCTCCGTCTGCCGGTTAGATCGGCCCCCAGTCCTGCTGGCCCCAGCGATGACAGAGGAGGAGGAATGAGGAGTGC CGTGCCTGGGCTGGGCCATCGCCTCTCTCCCTCGGCTGGGTTTGTCATGCTCAGCCAGACCCGCTCCCGGTGGAGAGGCCGAGGGACCCTCATTTCTACGTTTGCATCCCTTTCTTCCAGGGCCTGCG GGGCTGACAGGCACACAGCCAGTGGTGAAGGTTCACGGAAGAACGAAGGAAGGAGTGAGCGTGGGGAGAGCCAGCCAGGCTCCCCATGTCCACCCAGATGGTGAGCTGGCCCTGCCCTGGAGACACTG TGTCCAGAGGCCAGCATAGCCCTCAAAACGGTTCCCACAGCTCCCAGCGGAGCCCTCAAAATGGTCCCCACAGCTGCCGCCCACTCTTGGGACCCTGAGTGTGGGGAGGCTGGGGTTGAGCAGTGGGG ATCAGGATCTGGCAGGATCGGAATGTAGAGGCCTGGGGGCTCCCGGCTGGGGACAGTGCCAGCAGGAGTGGCCGGGACGATGACGAGGTGAGGTGTCTGCTCCCAGGCTGTGTGTGGCTTGGATGCCA AAGCGCCTTTTGCTGTATTCGGCACCCTGAGACCCTTATGTCTGCCTATTGAAGGCACAGTTTACTCCCGGGAAAATAAACATTTGGGTTTATTTCGCTGTGACTGCA
hide sequence
|
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2020-12-03 |
AC092384.1 |
novel transcript, antisense to CBFA2T3 |
AC092384.1 |
uncharacterized LOC100129697 |
Symbol and/or name change |
19259462 |
PROVISIONAL |
2020-06-25 |
AC092384.1 |
uncharacterized LOC100129697 |
LOC100129697 |
uncharacterized LOC100129697 |
Symbol and/or name change |
19259462 |
PROVISIONAL |
2020-06-18 |
LOC100129697 |
uncharacterized LOC100129697 |
AC092384.1 |
uncharacterized LOC100129697 |
Symbol and/or name change |
5135510 |
APPROVED |
|
|