Or5b121 (olfactory receptor family 5 subfamily B member 121) - Rat Genome Database

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Gene: Or5b121 (olfactory receptor family 5 subfamily B member 121) Mus musculus
Analyze
No known orthologs.
Symbol: Or5b121
Name: olfactory receptor family 5 subfamily B member 121
RGD ID: 1623628
MGI Page MGI
Description: Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GA_x6K02T2RE5P-3862389-3863336; MOR202-; MOR202-44; olfactory receptor 1480; Olfr1480
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391913,507,039 - 13,507,986 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1913,505,277 - 13,508,639 (+)EnsemblGRCm39 Ensembl
GRCm381913,529,675 - 13,530,622 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1913,527,913 - 13,531,275 (+)EnsemblGRCm38mm10GRCm38
MGSCv371913,604,165 - 13,605,112 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361913,596,694 - 13,597,641 (+)NCBIMGSCv36mm8
Celera1914,200,971 - 14,201,918 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map198.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (ISA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14611657   PMID:15081110   PMID:21873635   PMID:32061665   PMID:32295537   PMID:37442135  


Genomics

Variants

.
Variants in Or5b121
46 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:56
Interacting mature miRNAs:56
Transcripts:ENSMUST00000072219
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
38455997Cdtm2_mCD62L+ CD8 TM cells 2 (mouse)19997736419977364Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120328703Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
12801464Rta2_mretinal aging 2 (mouse)141230287425302874Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse

Markers in Region
UniSTS:489585  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381913,619,164 - 13,620,111UniSTSGRCm38
GRCm381913,529,675 - 13,530,622UniSTSGRCm38
MGSCv371913,693,654 - 13,694,601UniSTSGRCm37
MGSCv371913,604,165 - 13,605,112UniSTSGRCm37
Celera1914,200,971 - 14,201,918UniSTS
Celera1914,290,301 - 14,291,248UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map19C1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000072219   ⟹   ENSMUSP00000072076
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1913,507,039 - 13,507,986 (+)Ensembl
GRCm38.p6 Ensembl1913,529,675 - 13,530,622 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207093   ⟹   ENSMUSP00000146782
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1913,505,304 - 13,508,639 (+)Ensembl
GRCm38.p6 Ensembl1913,527,940 - 13,531,275 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207904   ⟹   ENSMUSP00000147226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1913,505,288 - 13,507,986 (+)Ensembl
GRCm38.p6 Ensembl1913,527,924 - 13,530,622 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207987   ⟹   ENSMUSP00000146931
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1913,505,277 - 13,508,639 (+)Ensembl
GRCm38.p6 Ensembl1913,527,913 - 13,531,275 (+)Ensembl
Ensembl Acc Id: ENSMUST00000216709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1913,505,556 - 13,508,639 (+)Ensembl
GRCm38.p6 Ensembl1913,528,192 - 13,531,275 (+)Ensembl
RefSeq Acc Id: NM_207575   ⟹   NP_997458
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391913,507,039 - 13,507,986 (+)NCBI
GRCm381913,529,675 - 13,530,622 (+)NCBI
MGSCv371913,604,165 - 13,605,112 (+)RGD
Celera1914,200,971 - 14,201,918 (+)RGD
cM Map19 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_997458 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAP71838 (Get FASTA)   NCBI Sequence Viewer  
  EDL41511 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000072076
  ENSMUSP00000072076.2
  ENSMUSP00000146782.3
  ENSMUSP00000146931.3
  ENSMUSP00000147226.2
RefSeq Acc Id: NP_997458   ⟸   NM_207575
- UniProtKB: Q7TQQ6 (UniProtKB/TrEMBL),   Q8VFW6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000072076   ⟸   ENSMUST00000072219
Ensembl Acc Id: ENSMUSP00000146782   ⟸   ENSMUST00000207093
Ensembl Acc Id: ENSMUSP00000147226   ⟸   ENSMUST00000207904
Ensembl Acc Id: ENSMUSP00000146931   ⟸   ENSMUST00000207987
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A140LIR8-F1-model_v2 AlphaFold A0A140LIR8 1-359 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3031314 AgrOrtholog
Ensembl Genes ENSMUSG00000095484 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000072219 ENTREZGENE
  ENSMUST00000072219.2 UniProtKB/TrEMBL
  ENSMUST00000207093.3 UniProtKB/TrEMBL
  ENSMUST00000207904.2 UniProtKB/TrEMBL
  ENSMUST00000207987.3 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:404339 UniProtKB/TrEMBL
MGD MGI:3031314 ENTREZGENE
NCBI Gene 404339 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or5b121 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A140LIR8_MOUSE UniProtKB/TrEMBL
  Q7TQQ6 ENTREZGENE, UniProtKB/TrEMBL
  Q8VFW6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or5b121  olfactory receptor family 5 subfamily B member 121  Olfr1480  olfactory receptor 1480  Symbol and/or name change 5135510 APPROVED