Uty (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Uty (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked) Mus musculus
Analyze
Symbol: Uty
Name: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
RGD ID: 1623266
MGI Page MGI
Description: Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and histone H3K36 demethylase activity. Acts upstream of or within several processes, including cardiac muscle cell contraction; heterochromatin formation; and in utero embryonic development. Part of protein-containing complex. Is expressed in several structures, including alimentary system; early conceptus; forelimb bud; genitourinary system; and liver. Orthologous to human UTY (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: [histone H3]-trimethyl-L-lysine(27) demethylase UTY; histone demethylase UTY; Hydb; KIAA4057; male-specific histocompatibility antigen H-YDB; mKIAA4057; ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome; ubiquitously transcribed TPR protein on the Y chromosome; ubiquitously transcribed Y chromosome tetratricopeptide repeat protein
RGD Orthologs
Human
Rat
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y1,085,187 - 1,245,787 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblY1,096,861 - 1,245,759 (-)EnsemblGRCm39 Ensembl
GRCm38Y1,085,187 - 1,245,773 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY1,096,861 - 1,245,759 (-)EnsemblGRCm38mm10GRCm38
MGSCv37Y433,587 - 582,181 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36Y439,206 - 582,063 (-)NCBIMGSCv36mm8
CeleraY3,928,367 - 4,071,302 (-)NCBICelera
Cytogenetic MapYpterNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7896271   PMID:8944031   PMID:9499428   PMID:9598304   PMID:9736773   PMID:9854018   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12023983   PMID:12466851  
PMID:12477932   PMID:12617826   PMID:12904583   PMID:14610273   PMID:14662851   PMID:15618518   PMID:15747579   PMID:16141072   PMID:16141073   PMID:16299505   PMID:17327412   PMID:18287559  
PMID:18434530   PMID:18799693   PMID:20412781   PMID:20543856   PMID:21267068   PMID:21873635   PMID:22192413   PMID:22949634   PMID:23028370   PMID:23666012   PMID:24105479   PMID:27339988  
PMID:28949961   PMID:29551674   PMID:31267640   PMID:32913328   PMID:34368113   PMID:34862376   PMID:35212626   PMID:36343752   PMID:36412518   PMID:37196079   PMID:39183958  


Genomics

Comparative Map Data
Uty
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y1,085,187 - 1,245,787 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblY1,096,861 - 1,245,759 (-)EnsemblGRCm39 Ensembl
GRCm38Y1,085,187 - 1,245,773 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY1,096,861 - 1,245,759 (-)EnsemblGRCm38mm10GRCm38
MGSCv37Y433,587 - 582,181 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36Y439,206 - 582,063 (-)NCBIMGSCv36mm8
CeleraY3,928,367 - 4,071,302 (-)NCBICelera
Cytogenetic MapYpterNCBI
UTY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y13,233,895 - 13,480,670 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY13,234,577 - 13,480,673 (-)EnsemblGRCh38hg38GRCh38
GRCh37Y15,345,776 - 15,592,550 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y13,869,657 - 14,101,944 (-)NCBINCBI36Build 36hg18NCBI36
Build 34Y13,873,045 - 14,030,681NCBI
CeleraX2,342,975 - 2,575,256 (-)NCBICelera
Cytogenetic MapYq11.221NCBI
HuRefY10,010,130 - 10,240,194 (-)NCBIHuRef
T2T-CHM13v2.0Y14,140,601 - 14,387,359 (-)NCBIT2T-CHM13v2.0
Uty
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8Y1,018,111 - 1,178,493 (-)NCBIGRCr8
mRatBN7.2Y942,838 - 1,105,313 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblY924,168 - 1,103,422 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0Y1,065,274 - 1,206,127 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblY989,240 - 1,206,096 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X5,591,847 - 5,731,843 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX4,851,606 - 4,991,287 (-)NCBICelera
Cytogenetic MapYq11NCBI
UTY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2Y38,936,881 - 39,191,303 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1Y7,735,695 - 7,987,106 (+)NCBINHGRI_mPanPan1
UTY
(Canis lupus familiaris - dog)		 No map positions available.
LOC110255320
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1Y8,937,949 - 9,087,971 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1

Variants

.
Variants in Uty
161 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4620
Count of miRNA genes:868
Interacting mature miRNAs:1204
Transcripts:ENSMUST00000069309, ENSMUST00000133976, ENSMUST00000137048, ENSMUST00000139365, ENSMUST00000143286, ENSMUST00000143958, ENSMUST00000150715, ENSMUST00000154004, ENSMUST00000154527, ENSMUST00000154666, ENSMUST00000157073
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
Uty  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38Y1,158,218 - 1,158,381UniSTSGRCm38
MGSCv37Y494,661 - 494,824UniSTSGRCm37
CeleraY3,989,339 - 3,989,502UniSTS
Cytogenetic MapYA1UniSTS
cM MapY2.06UniSTS
DYBish6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38Y1,147,810 - 1,148,028UniSTSGRCm38
MGSCv37Y484,253 - 484,471UniSTSGRCm37
CeleraY3,978,931 - 3,979,149UniSTS
Cytogenetic MapYA1UniSTS
cM MapY UniSTS
Uty  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapYA1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001326682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001326683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001782882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC006508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC145571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC148319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF057367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP764633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP764956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000069309   ⟹   ENSMUSP00000070012
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,097,144 - 1,245,718 (-)Ensembl
GRCm38.p6 EnsemblY1,097,144 - 1,245,718 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133976
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,160,804 - 1,169,186 (-)Ensembl
GRCm38.p6 EnsemblY1,160,804 - 1,169,186 (-)Ensembl
Ensembl Acc Id: ENSMUST00000137048   ⟹   ENSMUSP00000119406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,157,961 - 1,245,702 (-)Ensembl
GRCm38.p6 EnsemblY1,157,961 - 1,245,702 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139365   ⟹   ENSMUSP00000114752
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,097,671 - 1,245,724 (-)Ensembl
GRCm38.p6 EnsemblY1,097,671 - 1,245,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143286   ⟹   ENSMUSP00000115113
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,096,861 - 1,245,691 (-)Ensembl
GRCm38.p6 EnsemblY1,096,861 - 1,245,691 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143958   ⟹   ENSMUSP00000120069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,151,949 - 1,245,756 (-)Ensembl
GRCm38.p6 EnsemblY1,151,949 - 1,245,756 (-)Ensembl
Ensembl Acc Id: ENSMUST00000150715   ⟹   ENSMUSP00000116372
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,186,777 - 1,245,467 (-)Ensembl
GRCm38.p6 EnsemblY1,186,777 - 1,245,467 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154004   ⟹   ENSMUSP00000114910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,098,020 - 1,245,759 (-)Ensembl
GRCm38.p6 EnsemblY1,098,020 - 1,245,759 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,199,297 - 1,245,739 (-)Ensembl
GRCm38.p6 EnsemblY1,199,297 - 1,245,739 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154666   ⟹   ENSMUSP00000122818
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,097,144 - 1,245,694 (-)Ensembl
GRCm38.p6 EnsemblY1,097,144 - 1,245,694 (-)Ensembl
Ensembl Acc Id: ENSMUST00000157073
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,172,547 - 1,245,738 (-)Ensembl
GRCm38.p6 EnsemblY1,172,547 - 1,245,738 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY1,134,814 - 1,137,181 (-)Ensembl
GRCm38.p6 EnsemblY1,134,814 - 1,137,181 (-)Ensembl
RefSeq Acc Id: NM_001326682   ⟹   NP_001313611
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
GRCm38Y1,097,144 - 1,245,759 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001326683   ⟹   NP_001313612
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
GRCm38Y1,097,144 - 1,245,759 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001419826   ⟹   NP_001406755
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
RefSeq Acc Id: NM_001419827   ⟹   NP_001406756
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
RefSeq Acc Id: NM_001419828   ⟹   NP_001406757
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
RefSeq Acc Id: NM_001419829   ⟹   NP_001406758
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
RefSeq Acc Id: NM_001419830   ⟹   NP_001406759
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
RefSeq Acc Id: NM_009484   ⟹   NP_033510
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,737 (-)NCBI
GRCm38Y1,097,144 - 1,245,759 (-)NCBI
MGSCv37Y433,587 - 582,181 (-)RGD
CeleraY3,928,367 - 4,071,302 (-)RGD
cM MapY ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531587   ⟹   XP_006531650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248581   ⟹   XP_011246883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248582   ⟹   XP_011246884
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248583   ⟹   XP_011246885
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,787 (-)NCBI
GRCm38Y1,097,144 - 1,245,745 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248584   ⟹   XP_011246886
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248585   ⟹   XP_011246887
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,085,187 - 1,245,771 (-)NCBI
GRCm38Y1,085,187 - 1,245,773 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248586   ⟹   XP_011246888
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248589   ⟹   XP_011246891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,149,939 - 1,245,772 (-)NCBI
GRCm38Y1,149,939 - 1,245,773 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318686   ⟹   XP_017174175
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318687   ⟹   XP_017174176
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318688   ⟹   XP_017174177
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318689   ⟹   XP_017174178
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,170,968 (-)NCBI
GRCm38Y1,097,144 - 1,169,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251565   ⟹   XP_030107425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
GRCm38Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162190   ⟹   XP_036018083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,771 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162191   ⟹   XP_036018084
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001782882
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,772 (-)NCBI
GRCm38Y1,097,144 - 1,245,773 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940592
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940593
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,772 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940594
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,097,144 - 1,245,765 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940595
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,085,187 - 1,245,771 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879400
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y1,085,187 - 1,245,771 (-)NCBI
GRCm38Y1,085,187 - 1,245,773 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001313611 (Get FASTA)   NCBI Sequence Viewer  
  NP_001313612 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406755 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406756 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406757 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406758 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406759 (Get FASTA)   NCBI Sequence Viewer  
  NP_033510 (Get FASTA)   NCBI Sequence Viewer  
  XP_006531650 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246883 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246884 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246885 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246886 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246887 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246888 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246891 (Get FASTA)   NCBI Sequence Viewer  
  XP_017174175 (Get FASTA)   NCBI Sequence Viewer  
  XP_017174176 (Get FASTA)   NCBI Sequence Viewer  
  XP_017174177 (Get FASTA)   NCBI Sequence Viewer  
  XP_017174178 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107425 (Get FASTA)   NCBI Sequence Viewer  
  XP_036018083 (Get FASTA)   NCBI Sequence Viewer  
  XP_036018084 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC67385 (Get FASTA)   NCBI Sequence Viewer  
  BAC31478 (Get FASTA)   NCBI Sequence Viewer  
  BAD90490 (Get FASTA)   NCBI Sequence Viewer  
  BAE25094 (Get FASTA)   NCBI Sequence Viewer  
  BAE36901 (Get FASTA)   NCBI Sequence Viewer  
  BAE37965 (Get FASTA)   NCBI Sequence Viewer  
  EDL38145 (Get FASTA)   NCBI Sequence Viewer  
  EDL38146 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000070012
  ENSMUSP00000070012.8
  ENSMUSP00000114752
  ENSMUSP00000114752.2
  ENSMUSP00000114910
  ENSMUSP00000114910.2
  ENSMUSP00000115113
  ENSMUSP00000115113.2
  ENSMUSP00000116372.2
  ENSMUSP00000119406.2
  ENSMUSP00000120069.2
  ENSMUSP00000122818.2
GenBank Protein P79457 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_033510   ⟸   NM_009484
- Peptide Label: isoform 1
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot),   G3X9F2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006531650   ⟸   XM_006531587
- Peptide Label: isoform X18
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246887   ⟸   XM_011248585
- Peptide Label: isoform X9
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246885   ⟸   XM_011248583
- Peptide Label: isoform X5
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246883   ⟸   XM_011248581
- Peptide Label: isoform X3
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246884   ⟸   XM_011248582
- Peptide Label: isoform X4
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246888   ⟸   XM_011248586
- Peptide Label: isoform X10
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246886   ⟸   XM_011248584
- Peptide Label: isoform X6
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246891   ⟸   XM_011248589
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017174176   ⟸   XM_017318687
- Peptide Label: isoform X2
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017174177   ⟸   XM_017318688
- Peptide Label: isoform X14
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017174175   ⟸   XM_017318686
- Peptide Label: isoform X1
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001313612   ⟸   NM_001326683
- Peptide Label: isoform 3
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot),   Q3UQE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001313611   ⟸   NM_001326682
- Peptide Label: isoform 2
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot),   E9PWW8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017174178   ⟸   XM_017318689
- Peptide Label: isoform X17
- UniProtKB: Q3TNX2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107425   ⟸   XM_030251565
- Peptide Label: isoform X15
- UniProtKB: P79457 (UniProtKB/Swiss-Prot),   O97979 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000116372   ⟸   ENSMUST00000150715
Ensembl Acc Id: ENSMUSP00000114752   ⟸   ENSMUST00000139365
Ensembl Acc Id: ENSMUSP00000115113   ⟸   ENSMUST00000143286
Ensembl Acc Id: ENSMUSP00000120069   ⟸   ENSMUST00000143958
Ensembl Acc Id: ENSMUSP00000114910   ⟸   ENSMUST00000154004
Ensembl Acc Id: ENSMUSP00000122818   ⟸   ENSMUST00000154666
Ensembl Acc Id: ENSMUSP00000070012   ⟸   ENSMUST00000069309
Ensembl Acc Id: ENSMUSP00000119406   ⟸   ENSMUST00000137048
RefSeq Acc Id: XP_036018083   ⟸   XM_036162190
- Peptide Label: isoform X13
- UniProtKB: E9Q504 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036018084   ⟸   XM_036162191
- Peptide Label: isoform X17
- UniProtKB: Q3TNX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001406756   ⟸   NM_001419827
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001406758   ⟸   NM_001419829
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001406757   ⟸   NM_001419828
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001406755   ⟸   NM_001419826
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001406759   ⟸   NM_001419830
- Peptide Label: isoform 8
Protein Domains
JmjC

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P79457-F1-model_v2 AlphaFold P79457 1-1212 view protein structure

Promoters
RGD ID:6848546
Promoter ID:MM_ACW:54450
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:UTY.JSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36Y456,716 - 457,216 (-)MPROMDB
RGD ID:6846570
Promoter ID:MM_KWN:62798
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   MEF_B4,   MEF_B6
Transcripts:NM_009484,   OTTMUST00000081731,   OTTMUST00000081733,   OTTMUST00000081744,   OTTMUST00000081747,   OTTMUST00000081749,   UC009UZG.1,   UC009UZH.1,   UC009UZI.1,   UC009UZJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36Y581,806 - 582,306 (-)MPROMDB
RGD ID:13681900
Promoter ID:EPDNEW_M25099
Type:initiation region
Name:Uty_1
Description:Mus musculus ubiquitously transcribed tetratricopeptide repeatgene, Y chromosome , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38Y1,245,702 - 1,245,762EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:894810 AgrOrtholog
Ensembl Genes ENSMUSG00000068457 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000069309 ENTREZGENE
  ENSMUST00000069309.14 UniProtKB/TrEMBL
  ENSMUST00000137048.8 UniProtKB/TrEMBL
  ENSMUST00000139365 ENTREZGENE
  ENSMUST00000139365.8 UniProtKB/TrEMBL
  ENSMUST00000143286 ENTREZGENE
  ENSMUST00000143286.8 UniProtKB/TrEMBL
  ENSMUST00000143958.8 UniProtKB/TrEMBL
  ENSMUST00000150715.2 UniProtKB/TrEMBL
  ENSMUST00000154004 ENTREZGENE
  ENSMUST00000154004.8 UniProtKB/TrEMBL
  ENSMUST00000154666 ENTREZGENE
  ENSMUST00000154666.8 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1370 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.10.110.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cupin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Corepressor-Demethylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  JmjC_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KDM6_GATAL_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KDM6A_B-like_C-hel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KDM6A_B-like_GATAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22290 UniProtKB/TrEMBL
MGD MGI:894810 ENTREZGENE
NCBI Gene 22290 ENTREZGENE
PANTHER HISTONE DEMETHYLASE UTY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LYSINE-SPECIFIC DEMETHYLASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam JmjC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KDM6_C-hel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KDM6_GATAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Uty PhenoGen
PROSITE JMJC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot
SMART JmjC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Clavaminate synthase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HCP-like UniProtKB/Swiss-Prot
  SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z2A3_MOUSE UniProtKB/TrEMBL
  D6RFT4_MOUSE UniProtKB/TrEMBL
  D6RJL0_MOUSE UniProtKB/TrEMBL
  E9PWW8 ENTREZGENE, UniProtKB/TrEMBL
  E9Q504 ENTREZGENE, UniProtKB/TrEMBL
  F7BBC1_MOUSE UniProtKB/TrEMBL
  G3X9F2 ENTREZGENE, UniProtKB/TrEMBL
  O97979 ENTREZGENE
  P79457 ENTREZGENE
  Q3TNX2 ENTREZGENE, UniProtKB/TrEMBL
  Q3TRX5_MOUSE UniProtKB/TrEMBL
  Q3UQE8 ENTREZGENE, UniProtKB/TrEMBL
  Q5DTQ7_MOUSE UniProtKB/TrEMBL
  Q8C926_MOUSE UniProtKB/TrEMBL
  UTY_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary O97979 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-18 Uty  ubiquitously transcribed tetratricopeptide repeat containing, Y-linked  Uty  ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome  Symbol and/or name change 5135510 APPROVED