Gm4911 (predicted pseudogene 4911) - Rat Genome Database

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Gene: Gm4911 (predicted pseudogene 4911) Mus musculus
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Symbol: Gm4911
Name: predicted pseudogene 4911
RGD ID: 1622048
MGI Page MGI
Description:
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG236892
Related Functional Gene: Mageb5  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X91,123,471 - 91,124,404 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX91,123,456 - 91,124,400 (-)EnsemblGRCm39 Ensembl
GRCm38X92,079,865 - 92,080,798 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX92,079,850 - 92,080,794 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X89,325,204 - 89,326,137 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X88,332,476 - 88,334,323 (-)NCBIMGSCv36mm8
CeleraX79,020,273 - 79,021,206 (-)NCBICelera
Cytogenetic MapXC2NCBI
cM MapX40.61NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:149
Count of miRNA genes:130
Interacting mature miRNAs:133
Transcripts:ENSMUST00000119388, ENSMUST00000179608
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse

1 to 10 of 11 rows





RefSeq Transcripts NG_017914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL646048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000119388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX91,123,456 - 91,124,400 (-)Ensembl
GRCm38.p6 EnsemblX92,079,850 - 92,080,794 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081743 Ensembl, ENTREZGENE
MGD MGI:3643139 ENTREZGENE
NCBI Gene 236892 ENTREZGENE
PhenoGen Gm4911 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Gm4911  predicted pseudogene 4911  Gm4911  predicted gene 4911  Symbol and/or name change 5135510 APPROVED