Sidt1 (SID1 transmembrane family, member 1) - Rat Genome Database

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Gene: Sidt1 (SID1 transmembrane family, member 1) Mus musculus
Analyze
Symbol: Sidt1
Name: SID1 transmembrane family, member 1
RGD ID: 1621987
MGI Page MGI
Description: Enables double-stranded RNA binding activity. Predicted to be involved in RNA transport. Predicted to be located in membrane. Predicted to be active in lysosome and plasma membrane. Is expressed in intestine and male reproductive gland or organ. Orthologous to human SIDT1 (SID1 transmembrane family member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW045928; B830021E24Rik; SID1 transmembrane family member 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391644,060,540 - 44,153,575 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1644,060,543 - 44,153,559 (-)EnsemblGRCm39 Ensembl
GRCm381644,240,177 - 44,333,212 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,240,180 - 44,333,196 (-)EnsemblGRCm38mm10GRCm38
MGSCv371644,240,293 - 44,332,951 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361644,159,512 - 44,252,170 (-)NCBIMGSCv36mm8
Celera1644,597,999 - 44,690,348 (-)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.57NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
lysosome  (IBA)
membrane  (IEA)
plasma membrane  (IBA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:21677750  
PMID:21873635   PMID:24194600   PMID:26067272   PMID:27626380   PMID:31061008   PMID:31146259   PMID:32801357   PMID:34187513   PMID:35065421   PMID:38355793  


Genomics

Comparative Map Data
Sidt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391644,060,540 - 44,153,575 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1644,060,543 - 44,153,559 (-)EnsemblGRCm39 Ensembl
GRCm381644,240,177 - 44,333,212 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,240,180 - 44,333,196 (-)EnsemblGRCm38mm10GRCm38
MGSCv371644,240,293 - 44,332,951 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361644,159,512 - 44,252,170 (-)NCBIMGSCv36mm8
Celera1644,597,999 - 44,690,348 (-)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.57NCBI
SIDT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383113,532,555 - 113,637,111 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3113,532,555 - 113,629,714 (+)EnsemblGRCh38hg38GRCh38
GRCh373113,251,402 - 113,348,422 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363114,733,908 - 114,831,112 (+)NCBINCBI36Build 36hg18NCBI36
Build 343114,734,182 - 114,830,960NCBI
Celera3111,659,802 - 111,756,995 (+)NCBICelera
Cytogenetic Map3q13.2NCBI
HuRef3110,626,132 - 110,723,353 (+)NCBIHuRef
CHM1_13113,214,655 - 113,311,801 (+)NCBICHM1_1
T2T-CHM13v2.03116,253,714 - 116,358,275 (+)NCBIT2T-CHM13v2.0
Sidt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81169,867,758 - 69,965,377 (+)NCBIGRCr8
mRatBN7.21156,362,788 - 56,459,939 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,363,512 - 56,459,050 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1165,176,706 - 65,272,625 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01157,838,945 - 57,934,861 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01156,901,296 - 57,020,492 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01161,320,480 - 61,416,560 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,321,459 - 61,417,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01165,428,045 - 65,525,566 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,926,982 - 58,024,032 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1155,921,516 - 56,015,893 (+)NCBICelera
Cytogenetic Map11q21NCBI
Sidt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542713,649,216 - 13,749,328 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542713,649,216 - 13,747,983 (+)NCBIChiLan1.0ChiLan1.0
SIDT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22111,528,038 - 111,624,661 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13111,532,845 - 111,629,438 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03110,674,270 - 110,771,758 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13117,596,224 - 117,692,704 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3117,629,626 - 117,690,849 (+)Ensemblpanpan1.1panPan2
SIDT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13317,835,266 - 17,930,679 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3317,836,200 - 17,928,793 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3317,937,860 - 18,032,787 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03318,079,968 - 18,174,760 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,079,968 - 18,174,717 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13317,884,011 - 17,978,835 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03317,930,954 - 18,025,935 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,481,564 - 18,577,030 (+)NCBIUU_Cfam_GSD_1.0
Sidt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602136,365,591 - 136,447,145 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365361,075,251 - 1,156,312 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365361,074,987 - 1,156,318 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SIDT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,300,175 - 146,396,542 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113146,300,172 - 146,396,552 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,885,429 - 155,981,787 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SIDT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12267,232,377 - 67,324,862 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2267,230,564 - 67,324,784 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604199,150,253 - 99,239,596 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sidt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473134,926,269 - 35,050,518 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473134,925,895 - 35,050,577 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sidt1
2662 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2231
Count of miRNA genes:591
Interacting mature miRNAs:773
Transcripts:ENSMUST00000047446, ENSMUST00000124651, ENSMUST00000127124, ENSMUST00000127567, ENSMUST00000136381, ENSMUST00000147032
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164059392374594076Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse
11522747Eae41_mexperimental allergic encephalomyelitis susceptibility 41 (mouse)164039913478015472Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
4141985Nhil2_mnon-heme iron levels 2 (mouse)Not determined164414181044806480Mouse
4142112Skts-fp3_mskin tumor susceptibility in FVB and PWK 3 (mouse)Not determined164005388172924385Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
15092062Egrme4_mearly growth rate, maternal effect 4 (mouse)162521866444220250Mouse
10412263Gvhd6_mgraft-versus host disease 6 (mouse)Not determined163606085745511148Mouse
35673309Ari5_mantibody response to influenza 5, day 15, IgG1 (mouse)163982036244520363Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse

Markers in Region
D5Mit379  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381644,321,447 - 44,321,571UniSTSGRCm38
MGSCv371644,321,560 - 44,321,684UniSTSGRCm37
Celera1644,678,952 - 44,679,070UniSTS
Cytogenetic Map16B4UniSTS
cM Map1631.0UniSTS
Whitehead/MRC_RH16540.37UniSTS
AW045928  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381644,240,208 - 44,240,346UniSTSGRCm38
MGSCv371644,240,321 - 44,240,459UniSTSGRCm37
Celera1644,598,027 - 44,598,165UniSTS
Cytogenetic Map16B4UniSTS
Whitehead/MRC_RH16545.48UniSTS
AI101806  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381644,240,219 - 44,240,380UniSTSGRCm38
MGSCv371644,240,332 - 44,240,493UniSTSGRCm37
Celera1644,598,038 - 44,598,199UniSTS
Cytogenetic Map16B4UniSTS
bnlg1246a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381644,241,205 - 44,241,821UniSTSGRCm38
MGSCv371644,241,318 - 44,241,934UniSTSGRCm37
Celera1644,599,024 - 44,599,640UniSTS
Cytogenetic Map19D2UniSTS
Cytogenetic Map16B4UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006522237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_384572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_875822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY562213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY562214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000047446   ⟹   ENSMUSP00000038433
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,060,888 - 44,153,559 (-)Ensembl
GRCm38.p6 Ensembl1644,240,525 - 44,333,196 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124651
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,104,613 - 44,152,904 (-)Ensembl
GRCm38.p6 Ensembl1644,284,250 - 44,332,541 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,093,447 - 44,102,202 (-)Ensembl
GRCm38.p6 Ensembl1644,273,084 - 44,281,839 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127567
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,060,543 - 44,089,895 (-)Ensembl
GRCm38.p6 Ensembl1644,240,180 - 44,269,532 (-)Ensembl
Ensembl Acc Id: ENSMUST00000136381   ⟹   ENSMUSP00000115372
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,060,543 - 44,153,354 (-)Ensembl
GRCm38.p6 Ensembl1644,240,180 - 44,332,991 (-)Ensembl
Ensembl Acc Id: ENSMUST00000147032   ⟹   ENSMUSP00000114424
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1644,101,762 - 44,102,861 (-)Ensembl
GRCm38.p6 Ensembl1644,281,399 - 44,282,498 (-)Ensembl
RefSeq Acc Id: NM_001159419   ⟹   NP_001152891
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,543 - 44,153,201 (-)NCBI
GRCm381644,240,180 - 44,332,838 (-)NCBI
MGSCv371644,240,293 - 44,332,951 (-)RGD
Celera1644,597,999 - 44,690,348 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_198034   ⟹   NP_932151
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,543 - 44,153,201 (-)NCBI
GRCm381644,240,180 - 44,332,838 (-)NCBI
MGSCv371644,240,293 - 44,332,951 (-)RGD
Celera1644,597,999 - 44,690,348 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006522237   ⟹   XP_006522300
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,540 - 44,153,575 (-)NCBI
GRCm381644,240,177 - 44,333,212 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317034   ⟹   XP_017172523
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,540 - 44,153,575 (-)NCBI
GRCm381644,240,177 - 44,333,212 (-)NCBI
Sequence:
RefSeq Acc Id: XR_384572
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,540 - 44,153,575 (-)NCBI
GRCm381644,240,177 - 44,333,212 (-)NCBI
Sequence:
RefSeq Acc Id: XR_875822
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391644,060,540 - 44,153,575 (-)NCBI
GRCm381644,240,177 - 44,333,212 (-)NCBI
Sequence:
RefSeq Acc Id: NP_932151   ⟸   NM_198034
- Peptide Label: isoform 2 precursor
- UniProtKB: Q8R397 (UniProtKB/Swiss-Prot),   Q6AXF6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001152891   ⟸   NM_001159419
- Peptide Label: isoform 1 precursor
- UniProtKB: E9Q247 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006522300   ⟸   XM_006522237
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017172523   ⟸   XM_017317034
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000114424   ⟸   ENSMUST00000147032
Ensembl Acc Id: ENSMUSP00000038433   ⟸   ENSMUST00000047446
Ensembl Acc Id: ENSMUSP00000115372   ⟸   ENSMUST00000136381

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AXF6-F1-model_v2 AlphaFold Q6AXF6 1-827 view protein structure

Promoters
RGD ID:6826768
Promoter ID:MM_KWN:21071
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung,   Spleen
Transcripts:UC007ZHE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361644,332,281 - 44,333,087 (-)MPROMDB
RGD ID:8686248
Promoter ID:EPDNEW_M21155
Type:initiation region
Name:Sidt1_1
Description:Mus musculus SID1 transmembrane family, member 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381644,332,931 - 44,332,991EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443155 AgrOrtholog
Ensembl Genes ENSMUSG00000022696 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000047446 ENTREZGENE
  ENSMUST00000047446.13 UniProtKB/TrEMBL
  ENSMUST00000136381 ENTREZGENE
  ENSMUST00000136381.8 UniProtKB/Swiss-Prot
  ENSMUST00000147032.2 UniProtKB/TrEMBL
InterPro SID1_TM_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320007 UniProtKB/Swiss-Prot
MGD MGI:2443155 ENTREZGENE
NCBI Gene 320007 ENTREZGENE
PANTHER PTHR12185 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SID1 TRANSMEMBRANE FAMILY MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SID-1_RNA_chan UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sidt1 PhenoGen
UniProt E9Q247 ENTREZGENE, UniProtKB/TrEMBL
  F6YLH2_MOUSE UniProtKB/TrEMBL
  Q6AXF6 ENTREZGENE
  Q6Q3F6_MOUSE UniProtKB/TrEMBL
  Q6Q3F7_MOUSE UniProtKB/TrEMBL
  Q8BZK2_MOUSE UniProtKB/TrEMBL
  Q8R397 ENTREZGENE
  SIDT1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8R397 UniProtKB/Swiss-Prot