Symbol:
Krtap21-1
Name:
keratin associated protein 21-1
RGD ID:
1621384
MGI Page
MGI
Description:
Acts upstream of or within several processes, including hair follicle development; pigment accumulation in tissues; and post-embryonic camera-type eye development. Predicted to be located in intermediate filament.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
1110017B05Rik; AI506979; KAP21.1; keratin associated protein 16-7; keratin-associated protein 16-7; keratin-associated protein 16.7; keratin-associated protein 21-1; Krtap1; Krtap16-7
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 16 89,199,915 - 89,200,662 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 16 89,200,106 - 89,200,756 (-) Ensembl GRCm39 Ensembl GRCm38 16 89,403,027 - 89,403,774 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 16 89,403,218 - 89,403,868 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 16 89,403,272 - 89,404,019 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 16 89,403,272 - 89,404,049 (-) NCBI MGSCv36 mm8 Celera 16 89,601,944 - 89,602,742 (-) NCBI Celera Cytogenetic Map 16 C3.3 NCBI cM Map 16 51.42 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Krtap21-1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 16 89,199,915 - 89,200,662 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 16 89,200,106 - 89,200,756 (-) Ensembl GRCm39 Ensembl GRCm38 16 89,403,027 - 89,403,774 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 16 89,403,218 - 89,403,868 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 16 89,403,272 - 89,404,019 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 16 89,403,272 - 89,404,049 (-) NCBI MGSCv36 mm8 Celera 16 89,601,944 - 89,602,742 (-) NCBI Celera Cytogenetic Map 16 C3.3 NCBI cM Map 16 51.42 NCBI
AL445238.1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 13 63,832,361 - 63,833,053 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 13 63,832,361 - 63,833,531 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 13 64,406,494 - 64,407,186 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Cytogenetic Map 13 q21.31 NCBI CHM1_1 13 64,288,497 - 64,288,977 (+) NCBI CHM1_1 T2T-CHM13v2.0 13 63,053,933 - 63,054,625 (-) NCBI T2T-CHM13v2.0
LOC111093530 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 31 25,744,080 - 25,745,146 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 31 25,734,817 - 25,735,818 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 31 25,859,202 - 25,860,233 (-) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 31 25,806,714 - 25,807,715 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 31 25,818,314 - 25,819,315 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 31 26,286,598 - 26,287,623 (-) NCBI UU_Cfam_GSD_1.0
.
Predicted Target Of
Count of predictions: 142 Count of miRNA genes: 119 Interacting mature miRNAs: 126 Transcripts: ENSMUST00000078422 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1302194 Pgia10_m proteoglycan induced arthritis 10 (mouse) Not determined 16 68600722 98008968 Mouse 26884376 Skwq4_m skull length QTL 4, 5 week (mouse) 16 8417864 90896888 Mouse 1302096 Aod1a_m autoimmune ovarian dysgenesis 1a (mouse) Not determined 16 35446643 92573008 Mouse 1558740 Bpq9_m blood pressure QTL 9 (mouse) Not determined 16 63327336 97327472 Mouse 4141113 Tgq28_m triglyceride QTL 28 (mouse) Not determined 62986646 96986646 Mouse 1301364 Lith14_m lithogenic gene 14 (mouse) Not determined 16 55661846 89661961 Mouse 4142262 Lmr18_m leishmaniasis resistance 18 (mouse) Not determined 16 69127611 98008968 Mouse 11049573 Lmr18b_m leishmaniasis resistance 18b (mouse) 16 69127611 98008968 Mouse 1301598 Renf2_m renal failure 2 (mouse) Not determined 16 70380252 98008968 Mouse 11049574 Lmr18a_m leishmaniasis resistance 18a (mouse) 16 69127611 98008968 Mouse 11522753 Cocia19_m cocaine-induced activity, QTL 19 (mouse) 16 69254482 98008968 Mouse 1300928 Etia_m ethanol induced activation (mouse) Not determined 16 63313907 97314016 Mouse 1301125 Sluc27_m susceptibility to lung cancer 27 (mouse) Not determined 16 61608644 95608764 Mouse 1301032 Tauph_m tau phosphorylation (mouse) Not determined 16 69076132 98008968 Mouse
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000078422 ⟹ ENSMUSP00000077524
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 16 89,200,106 - 89,200,756 (-) Ensembl GRCm38.p6 Ensembl 16 89,403,218 - 89,403,868 (-) Ensembl
RefSeq Acc Id:
NM_028621 ⟹ NP_082897
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 16 89,199,915 - 89,200,662 (-) NCBI GRCm38 16 89,403,027 - 89,403,774 (-) ENTREZGENE MGSCv37 16 89,403,272 - 89,404,019 (-) RGD Celera 16 89,601,944 - 89,602,742 (-) RGD cM Map 16 ENTREZGENE
Sequence:
TGAAACCTCACCTCCTGCCACCATGTGCTGCAACTACTACGGAAACTCCTGTGGAGGCTGTGGATACGGCTCAAGATATGGCTATGGCTGTGGATACGGCTCAGGCTATGGCTGTGGATACGGCTCTG
hide sequence
RefSeq Acc Id:
NP_082897 ⟸ NM_028621
- UniProtKB:
B9EK12 (UniProtKB/TrEMBL)
- Sequence:
MCCNYYGNSCGGCGYGSRYGYGCGYGSGYGCGYGSGYGCGYGSGYGCGYGSGYGCGYGSGYGCGYGSGYGCGYGSSYGCGYGSGYGCGYGSGYGCGYGSGYGCGYGSRYGCGYGSGCCSYRKCYSSCC
hide sequence
Ensembl Acc Id:
ENSMUSP00000077524 ⟸ ENSMUST00000078422
RGD ID: 13674374 Promoter ID: EPDNEW_M21336 Type: single initiation site Name: Krtap21-1_1 Description: Mus musculus keratin associated protein 21-1 (Krtap21-1), mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 16 89,403,804 - 89,403,864 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2015-05-21
Krtap21-1
keratin associated protein 21-1
Krtap21-1
keratin associated protein 21-1
Data merged from RGD:1616732
737654 PROVISIONAL
2012-07-31
Krtap21-1
keratin associated protein 21-1
Krtap16-7
keratin associated protein 16-7
Symbol and/or name change
5135510 APPROVED
