HSP90AA5P (heat shock protein 90 alpha family class A member 5, pseudogene) - Rat Genome Database

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Gene: HSP90AA5P (heat shock protein 90 alpha family class A member 5, pseudogene) Homo sapiens
Analyze
Symbol: HSP90AA5P
Name: heat shock protein 90 alpha family class A member 5, pseudogene
RGD ID: 1605779
HGNC Page HGNC:32535
Description: Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and ATP-dependent protein folding chaperone. Predicted to be involved in protein folding. Predicted to be located in cytoplasm.
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: heat shock protein 90kDa alpha family class A member 5, pseudogene; HSP90Ae
Related Functional Gene: HSP90AA1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383184,115,842 - 184,118,003 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3184,115,352 - 184,117,898 (+)EnsemblGRCh38hg38GRCh38
GRCh373183,833,630 - 183,835,791 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363185,316,461 - 185,318,379 (+)NCBINCBI36Build 36hg18NCBI36
Celera3182,275,899 - 182,278,060 (+)NCBICelera
Cytogenetic Map3q27.1NCBI
HuRef3181,241,145 - 181,243,306 (+)NCBIHuRef
CHM1_13183,798,032 - 183,800,193 (+)NCBICHM1_1
T2T-CHM13v2.03186,925,408 - 186,927,569 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16269234   PMID:22360420   PMID:22939629   PMID:23251661   PMID:26186194   PMID:28330616   PMID:28514442   PMID:28524877   PMID:29229926   PMID:29845934   PMID:30619736   PMID:31586073  
PMID:32176739   PMID:32707033   PMID:33961781   PMID:34349018   PMID:34428256   PMID:35235311   PMID:36574265  


Genomics

Variants

.
Variants in HSP90AA5P
2 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:306
Count of miRNA genes:150
Interacting mature miRNAs:153
Transcripts:ENST00000382482, ENST00000438353
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH75563  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map3q27.1UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
977 2122 2336 1697 4218 1341 1714 390 1140 237 1814 5099 4762 6 3324 665 1569 1223 160

Sequence


Ensembl Acc Id: ENST00000438353
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3184,115,352 - 184,117,898 (+)Ensembl
Protein Sequences
GenBank Protein AAX38248 (Get FASTA)   NCBI Sequence Viewer  
  Q58FG0 (Get FASTA)   NCBI Sequence Viewer  

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q58FG0-F1-model_v2 AlphaFold Q58FG0 1-334 view protein structure


Additional Information

Database Acc Id Source(s)
COSMIC HSP90AA5P COSMIC
Ensembl Genes ENSG00000205955 Ensembl
Gene3D-CATH 1.20.120.790 UniProtKB/Swiss-Prot
  3.30.565.10 UniProtKB/Swiss-Prot
  3.40.50.11260 UniProtKB/Swiss-Prot
GTEx ENSG00000205955 GTEx
HGNC ID HGNC:32535 ENTREZGENE
Human Proteome Map HSP90AA5P Human Proteome Map
InterPro HATPase_C_sf UniProtKB/Swiss-Prot
  HSP90_C UniProtKB/Swiss-Prot
  Hsp90_fam UniProtKB/Swiss-Prot
  Ribosomal_S5_D2-typ_fold UniProtKB/Swiss-Prot
NCBI Gene HSP90AA5P ENTREZGENE
PANTHER HEAT SHOCK PROTEIN HSP 90-ALPHA UniProtKB/Swiss-Prot
  PTHR11528 UniProtKB/Swiss-Prot
Pfam HSP90 UniProtKB/Swiss-Prot
PharmGKB PA143485493 PharmGKB
Superfamily-SCOP SSF54211 UniProtKB/Swiss-Prot
  SSF55874 UniProtKB/Swiss-Prot
UniProt HS905_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-28 HSP90AA5P  heat shock protein 90 alpha family class A member 5, pseudogene    heat shock protein 90kDa alpha family class A member 5, pseudogene  Symbol and/or name change 5135510 APPROVED
2015-11-24 HSP90AA5P  heat shock protein 90kDa alpha family class A member 5, pseudogene    heat shock protein 90kDa alpha (cytosolic), class A member 5, pseudogene  Symbol and/or name change 5135510 APPROVED
2011-07-27 HSP90AA5P  heat shock protein 90kDa alpha (cytosolic), class A member 5, pseudogene  HSP90AA5P  heat shock protein 90kDa alpha (cytosolic), class A member 5 (pseudogene)  Symbol and/or name change 5135510 APPROVED