OR7E128P (olfactory receptor family 7 subfamily E member 128 pseudogene) - Rat Genome Database

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Gene: OR7E128P (olfactory receptor family 7 subfamily E member 128 pseudogene) Homo sapiens
Analyze
Symbol: OR7E128P
Name: olfactory receptor family 7 subfamily E member 128 pseudogene
RGD ID: 1605613
HGNC Page HGNC:15305
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,893,408 - 71,894,439 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,893,410 - 71,894,433 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,604,454 - 71,605,485 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361171,282,001 - 71,283,232 (+)NCBINCBI36Build 36hg18NCBI36
Celera1168,906,411 - 68,907,442 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1167,898,249 - 67,899,280 (+)NCBIHuRef
CHM1_11171,488,354 - 71,489,385 (+)NCBICHM1_1
T2T-CHM13v2.01171,820,314 - 71,821,345 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:122
Interacting mature miRNAs:122
Transcripts:ENST00000532736
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 5
Low 1067 648 1014 217 646 114 1079 395 645 175 924 990 110 131 705 4
Below cutoff 1276 1840 623 342 745 287 2871 1555 2278 196 475 501 60 927 1816

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000532736
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,893,410 - 71,894,433 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC OR7E128P COSMIC
Ensembl Genes ENSG00000228915 Ensembl, ENTREZGENE
GTEx ENSG00000228915 GTEx
HGNC ID HGNC:15305 ENTREZGENE
Human Proteome Map OR7E128P Human Proteome Map
NCBI Gene 81175 ENTREZGENE
PharmGKB PA32659 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 OR7E128P  olfactory receptor family 7 subfamily E member 128 pseudogene    olfactory receptor, family 7, subfamily E, member 128 pseudogene  Symbol and/or name change 5135510 APPROVED
2011-09-01 OR7E128P  olfactory receptor, family 7, subfamily E, member 128 pseudogene  OR7E128P  olfactory receptor, family 7, subfamily E, member 128 pseudogene  Symbol and/or name change 5135510 APPROVED