Gene: CCDC144NL (CCDC144A N-terminal like (pseudogene)) Homo sapiens
Analyze
Symbol:
CCDC144NL
Name:
CCDC144A N-terminal like (pseudogene) (Ensembl:CCDC144A N-terminal pseudogene)
RGD ID:
1603856
HGNC Page
HGNC:33735
Description:
INTERACTS WITH 2-deoxy-D-glucose; 3-methylcholanthrene; acrylamide
Type:
pseudo (Ensembl: lncRNA)
RefSeq Status:
VALIDATED
Previously known as:
CCDC144A N-terminal pseudogene; coiled-coil domain containing 144 family, N-terminal like; MGC87631; putative coiled-coil domain-containing protein 144 N-terminal-like
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Allele / Splice:
See ClinVar data
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 20,863,395 - 20,896,163 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 20,836,447 - 20,896,162 (-) Ensembl GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 20,893,392 - 20,896,020 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 20,766,708 - 20,799,476 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 20,707,300 - 20,740,045 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 17 21,742,454 - 21,775,198 (+) NCBI Celera Cytogenetic Map 17 p11.2 NCBI HuRef 17 19,968,987 - 20,001,733 (-) NCBI HuRef CHM1_1 17 20,775,357 - 20,808,102 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 20,812,211 - 20,844,977 (-) NCBI T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Additional References at PubMed
Genomics
Comparative Map Data
CCDC144NL Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 20,863,395 - 20,896,163 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 20,836,447 - 20,896,162 (-) Ensembl GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 20,893,392 - 20,896,020 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 20,766,708 - 20,799,476 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 20,707,300 - 20,740,045 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 17 21,742,454 - 21,775,198 (+) NCBI Celera Cytogenetic Map 17 p11.2 NCBI HuRef 17 19,968,987 - 20,001,733 (-) NCBI HuRef CHM1_1 17 20,775,357 - 20,808,102 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 20,812,211 - 20,844,977 (-) NCBI T2T-CHM13v2.0
4921524L21Rik Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 18 6,603,629 - 6,638,970 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 18 6,603,629 - 6,638,970 (+) Ensembl GRCm39 Ensembl GRCm38 18 6,603,629 - 6,638,970 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 18 6,603,629 - 6,638,970 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 18 6,603,631 - 6,638,964 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 18 6,603,627 - 6,639,055 (+) NCBI MGSCv36 mm8 Celera 18 6,651,231 - 6,686,569 (+) NCBI Celera Cytogenetic Map 18 A1 NCBI cM Map 18 4.53 NCBI
Clinical Variants
GRCh38/hg38 17p11.2(chr17:19239860-21530183)x3 copy number gain
Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054010 ]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054010 ]|See cases [RCV000054010 ]
Chr17:19239860..21530183 [GRCh38]
uncertain significance
miRNA Target Status
Predicted Target Of
Count of predictions: 1139 Count of miRNA genes: 784 Interacting mature miRNAs: 893 Transcripts: ENST00000327925, ENST00000539177, ENST00000539484 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction 
