LINC01599 (long intergenic non-protein coding RNA 1599) - Rat Genome Database

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Gene: LINC01599 (long intergenic non-protein coding RNA 1599) Homo sapiens
Analyze
Symbol: LINC01599 (Ensembl: LINC01588)
Name: long intergenic non-protein coding RNA 1599 (Ensembl:long intergenic non-protein coding RNA 1588)
RGD ID: 1602424
HGNC Page HGNC:27285
Description: ASSOCIATED WITH Brain-Lung-Thyroid Syndrome; L-2-hydroxyglutaric aciduria; L-2-hydroxyglutaric aciduria; INTERACTS WITH aflatoxin B1; Aflatoxin B2 alpha; benzo[a]pyrene
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: C14orf183; putative uncharacterized protein C14orf183
RGD Orthologs
Bonobo
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381450,007,313 - 50,105,043 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1449,927,213 - 50,105,121 (-)EnsemblGRCh38hg38GRCh38
GRCh371450,474,031 - 50,571,761 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361449,620,119 - 49,629,111 (-)NCBINCBI36Build 36hg18NCBI36
Celera1430,417,514 - 30,426,499 (-)NCBICelera
Cytogenetic Map14q21.3NCBI
HuRef1430,675,796 - 30,684,781 (-)NCBIHuRef
CHM1_11450,489,049 - 50,498,037 (-)NCBICHM1_1
T2T-CHM13v2.01444,212,500 - 44,311,279 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
Additional References at PubMed
PMID:12477932   PMID:16344560   PMID:19490893   PMID:31343991  


Genomics

Comparative Map Data
LINC01599
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381450,007,313 - 50,105,043 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1449,927,213 - 50,105,121 (-)EnsemblGRCh38hg38GRCh38
GRCh371450,474,031 - 50,571,761 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361449,620,119 - 49,629,111 (-)NCBINCBI36Build 36hg18NCBI36
Celera1430,417,514 - 30,426,499 (-)NCBICelera
Cytogenetic Map14q21.3NCBI
HuRef1430,675,796 - 30,684,781 (-)NCBIHuRef
CHM1_11450,489,049 - 50,498,037 (-)NCBICHM1_1
T2T-CHM13v2.01444,212,500 - 44,311,279 (-)NCBIT2T-CHM13v2.0
LOC100980742
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21551,217,726 - 51,235,381 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11450,434,230 - 50,449,397 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01430,671,031 - 30,680,109 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11448,976,894 - 48,986,232 (-)NCBIpanpan1.1PanPan1.1panPan2
LOC103229896
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12427,145,235 - 27,156,062 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605315,477,939 - 15,488,343 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in LINC01599
4 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 14q21.3-22.1(chr14:50091150-51777325)x3 copy number gain See cases [RCV000052059] Chr14:50091150..51777325 [GRCh38]
Chr14:50557868..52244043 [GRCh37]
Chr14:49627618..51313793 [NCBI36]
Chr14:14q21.3-22.1
uncertain significance
GRCh38/hg38 14q11.2-32.33(chr14:20151149-106855263)x3 copy number gain See cases [RCV000135543] Chr14:20151149..106855263 [GRCh38]
Chr14:20619308..107263478 [GRCh37]
Chr14:19689148..106334523 [NCBI36]
Chr14:14q11.2-32.33
pathogenic
GRCh38/hg38 14q21.1-22.3(chr14:39196172-56714461)x3 copy number gain See cases [RCV000140717] Chr14:39196172..56714461 [GRCh38]
Chr14:39665376..57181179 [GRCh37]
Chr14:38735127..56250932 [NCBI36]
Chr14:14q21.1-22.3
likely pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20043514-106877229)x3 copy number gain See cases [RCV000143373] Chr14:20043514..106877229 [GRCh38]
Chr14:20511673..107285437 [GRCh37]
Chr14:19581513..106356482 [NCBI36]
Chr14:14q11.2-32.33
pathogenic
L2HGDH, EX1-9DEL deletion L-2-hydroxyglutaric aciduria [RCV000001678] Chr14:50000000..50247254 [GRCh38]
Chr14:14q21.3
pathogenic
GRCh37/hg19 14q11.2-22.2(chr14:23164384-54733411)x3 copy number gain See cases [RCV000447658] Chr14:23164384..54733411 [GRCh37]
Chr14:14q11.2-22.2
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19794561-107234280)x3 copy number gain See cases [RCV000446256] Chr14:19794561..107234280 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:20511673-107285437) copy number gain See cases [RCV000512041] Chr14:20511673..107285437 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q11.1-32.33(chr14:19000422-107289053)x3 copy number gain not provided [RCV000738412] Chr14:19000422..107289053 [GRCh37]
Chr14:14q11.1-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19280733-107287663)x3 copy number gain not provided [RCV000738413] Chr14:19280733..107287663 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19327823-107287663)x3 copy number gain not provided [RCV000738414] Chr14:19327823..107287663 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
NC_000014.8:g.(?_50092240)_(50698021_?)dup duplication Noonan syndrome 9 [RCV000799423] Chr14:49625522..50231303 [GRCh38]
Chr14:50092240..50698021 [GRCh37]
Chr14:14q21.3
uncertain significance
GRCh37/hg19 14q21.3-22.1(chr14:50317272-51627752)x3 copy number gain not provided [RCV001006632] Chr14:50317272..51627752 [GRCh37]
Chr14:14q21.3-22.1
uncertain significance
NC_000014.8:g.(21162263_36986276)_(36987308_50713602)del deletion Brain-lung-thyroid syndrome [RCV002221171] Chr14:36986276..36987308 [GRCh37]
Chr14:14q11.2-21.3
pathogenic
GRCh37/hg19 14q13.3-32.33(chr14:37671058-106985955)x2 copy number gain See cases [RCV002286356] Chr14:37671058..106985955 [GRCh37]
Chr14:14q13.3-32.33
pathogenic
GRCh37/hg19 14q11.2-23.1(chr14:20511673-61826023)x3 copy number gain not provided [RCV003485022] Chr14:20511673..61826023 [GRCh37]
Chr14:14q11.2-23.1
pathogenic

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407171927GWAS820903_Haspartate aminotransferase measurement QTL GWAS820903 (human)4e-16aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)145004539350045394Human
407172016GWAS820992_Hserum alanine aminotransferase measurement QTL GWAS820992 (human)1e-08serum alanine aminotransferase measurementserum alanine aminotransferase activity level (CMO:0000575)145004539350045394Human
407138929GWAS787905_Hdementia, Alzheimer's disease neuropathologic change QTL GWAS787905 (human)0.000003dementia, Alzheimer's disease neuropathologic change145002007350020074Human
407323202GWAS972178_Hsex hormone-binding globulin measurement QTL GWAS972178 (human)7e-11sex hormone-binding globulin measurement145004562950045630Human
407165997GWAS814973_Haspartate aminotransferase measurement QTL GWAS814973 (human)3e-25aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)145004562950045630Human
407140926GWAS789902_HErythema nodosum QTL GWAS789902 (human)0.000007Erythema nodosum145001860950018610Human
406890443GWAS539419_HDNA methylation QTL GWAS539419 (human)9e-09DNA methylation145005648950056490Human
407246957GWAS895933_Hbody height QTL GWAS895933 (human)1e-09body height (VT:0001253)body height (CMO:0000106)145009345950093460Human
407172984GWAS821960_Hserum alanine aminotransferase measurement QTL GWAS821960 (human)1e-15serum alanine aminotransferase measurementserum alanine aminotransferase activity level (CMO:0000575)145004562950045630Human
407181915GWAS830891_Hcreatinine measurement QTL GWAS830891 (human)2e-08creatinine measurementblood creatinine measurement (CMO:0000767)145010075450100755Human

Markers in Region
SHGC-144589  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371450,558,271 - 50,558,617UniSTSGRCh37
Build 361449,628,021 - 49,628,367RGDNCBI36
Celera1430,425,409 - 30,425,755RGD
Cytogenetic Map14q21.3UniSTS
HuRef1430,683,691 - 30,684,037UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_131171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF390030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL117692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC067360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC084561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF055388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF691660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ027525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU927649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA856251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA935043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC791606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MW804067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MW804068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA986391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T90102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000399206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,712 - 50,007,520 (-)Ensembl
Ensembl Acc Id: ENST00000528300
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,380 - 50,007,520 (-)Ensembl
Ensembl Acc Id: ENST00000529902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,555 - 50,006,519 (-)Ensembl
Ensembl Acc Id: ENST00000530176
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,982,184 - 50,007,520 (-)Ensembl
Ensembl Acc Id: ENST00000533506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,990,990 - 49,993,134 (-)Ensembl
Ensembl Acc Id: ENST00000553463
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,300 - 50,011,442 (-)Ensembl
Ensembl Acc Id: ENST00000553914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,300 - 50,040,209 (-)Ensembl
Ensembl Acc Id: ENST00000554129
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,595 - 50,041,229 (-)Ensembl
Ensembl Acc Id: ENST00000556019
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,041,643 - 50,089,175 (-)Ensembl
Ensembl Acc Id: ENST00000556130
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,946,154 - 49,960,662 (-)Ensembl
Ensembl Acc Id: ENST00000556434
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,571 - 49,961,960 (-)Ensembl
Ensembl Acc Id: ENST00000556913
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,941,936 - 49,961,960 (-)Ensembl
Ensembl Acc Id: ENST00000557142
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,091,555 (-)Ensembl
Ensembl Acc Id: ENST00000603228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,105,102 (-)Ensembl
Ensembl Acc Id: ENST00000603474
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,297 - 50,040,606 (-)Ensembl
Ensembl Acc Id: ENST00000623502
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,083,651 - 50,092,643 (-)Ensembl
Ensembl Acc Id: ENST00000635379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,556 - 50,089,203 (-)Ensembl
Ensembl Acc Id: ENST00000655269
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,297 (-)Ensembl
Ensembl Acc Id: ENST00000658223
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,990,944 - 49,993,121 (-)Ensembl
Ensembl Acc Id: ENST00000685750
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,060,123 - 50,105,102 (-)Ensembl
Ensembl Acc Id: ENST00000686177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,348 (-)Ensembl
Ensembl Acc Id: ENST00000690038
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,040,570 (-)Ensembl
Ensembl Acc Id: ENST00000700829
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,668 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000701026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,000,068 - 50,003,441 (-)Ensembl
Ensembl Acc Id: ENST00000701065
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,558 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000701392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,039,893 (-)Ensembl
Ensembl Acc Id: ENST00000701890
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000701948
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,311 (-)Ensembl
Ensembl Acc Id: ENST00000769199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,006,623 - 50,105,108 (-)Ensembl
Ensembl Acc Id: ENST00000769200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,105,102 (-)Ensembl
Ensembl Acc Id: ENST00000769201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,314 - 50,105,102 (-)Ensembl
Ensembl Acc Id: ENST00000769202
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,326 - 50,105,056 (-)Ensembl
Ensembl Acc Id: ENST00000769203
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,020,908 - 50,105,034 (-)Ensembl
Ensembl Acc Id: ENST00000769204
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,021,145 - 50,105,105 (-)Ensembl
Ensembl Acc Id: ENST00000769205
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,577 - 50,105,106 (-)Ensembl
Ensembl Acc Id: ENST00000769206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,556 - 50,040,605 (-)Ensembl
Ensembl Acc Id: ENST00000769207
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,060,122 - 50,105,077 (-)Ensembl
Ensembl Acc Id: ENST00000769208
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,060,119 - 50,105,064 (-)Ensembl
Ensembl Acc Id: ENST00000769209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,213 - 49,970,319 (-)Ensembl
Ensembl Acc Id: ENST00000769210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,554 - 49,970,324 (-)Ensembl
Ensembl Acc Id: ENST00000769211
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,554 - 49,970,291 (-)Ensembl
Ensembl Acc Id: ENST00000769212
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,554 - 49,970,240 (-)Ensembl
Ensembl Acc Id: ENST00000769213
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,047,613 (-)Ensembl
Ensembl Acc Id: ENST00000769214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,314 - 50,047,550 (-)Ensembl
Ensembl Acc Id: ENST00000769215
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,047,513 (-)Ensembl
Ensembl Acc Id: ENST00000769216
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,047,512 (-)Ensembl
Ensembl Acc Id: ENST00000769217
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,311 - 50,046,531 (-)Ensembl
Ensembl Acc Id: ENST00000769218
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,005,123 - 50,039,854 (-)Ensembl
Ensembl Acc Id: ENST00000769219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,006,622 - 50,040,209 (-)Ensembl
Ensembl Acc Id: ENST00000769220
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,006,622 - 50,040,203 (-)Ensembl
Ensembl Acc Id: ENST00000769221
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,314 - 50,040,725 (-)Ensembl
Ensembl Acc Id: ENST00000769222
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,040,605 (-)Ensembl
Ensembl Acc Id: ENST00000769223
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,040,570 (-)Ensembl
Ensembl Acc Id: ENST00000769224
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,040,570 (-)Ensembl
Ensembl Acc Id: ENST00000769225
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,315 - 50,040,568 (-)Ensembl
Ensembl Acc Id: ENST00000769226
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,554 - 49,960,729 (-)Ensembl
Ensembl Acc Id: ENST00000769227
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,927,554 - 49,960,677 (-)Ensembl
Ensembl Acc Id: ENST00000769228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,300 - 50,040,209 (-)Ensembl
Ensembl Acc Id: ENST00000769229
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,311 - 50,040,209 (-)Ensembl
Ensembl Acc Id: ENST00000769230
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,039,867 (-)Ensembl
Ensembl Acc Id: ENST00000769231
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,300 - 50,039,857 (-)Ensembl
Ensembl Acc Id: ENST00000769232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,039,855 (-)Ensembl
Ensembl Acc Id: ENST00000769233
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,039,854 (-)Ensembl
Ensembl Acc Id: ENST00000769234
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,314 - 50,039,854 (-)Ensembl
Ensembl Acc Id: ENST00000769235
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,039,481 (-)Ensembl
Ensembl Acc Id: ENST00000769236
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,010,355 - 50,039,854 (-)Ensembl
Ensembl Acc Id: ENST00000769237
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,030,234 (-)Ensembl
Ensembl Acc Id: ENST00000769238
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,313 - 50,029,725 (-)Ensembl
Ensembl Acc Id: ENST00000769239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,962,010 - 49,982,278 (-)Ensembl
Ensembl Acc Id: ENST00000769240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,149 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000769241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,021,144 - 50,040,568 (-)Ensembl
Ensembl Acc Id: ENST00000769242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,668 - 50,000,948 (-)Ensembl
Ensembl Acc Id: ENST00000769243
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,007,144 (-)Ensembl
Ensembl Acc Id: ENST00000769244
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,005,460 (-)Ensembl
Ensembl Acc Id: ENST00000769245
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,561 - 50,003,814 (-)Ensembl
Ensembl Acc Id: ENST00000769246
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,003,783 (-)Ensembl
Ensembl Acc Id: ENST00000769247
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,003,427 (-)Ensembl
Ensembl Acc Id: ENST00000769248
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,003,447 (-)Ensembl
Ensembl Acc Id: ENST00000769249
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,003,445 (-)Ensembl
Ensembl Acc Id: ENST00000769250
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,558 - 50,003,437 (-)Ensembl
Ensembl Acc Id: ENST00000769251
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,556 - 50,003,403 (-)Ensembl
Ensembl Acc Id: ENST00000769252
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,149 - 49,992,911 (-)Ensembl
Ensembl Acc Id: ENST00000769253
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,449 - 50,003,160 (-)Ensembl
Ensembl Acc Id: ENST00000769254
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,003,190 (-)Ensembl
Ensembl Acc Id: ENST00000769255
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,556 - 50,003,177 (-)Ensembl
Ensembl Acc Id: ENST00000769256
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,681 - 49,993,095 (-)Ensembl
Ensembl Acc Id: ENST00000769257
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,686 - 49,993,098 (-)Ensembl
Ensembl Acc Id: ENST00000769258
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,595 - 50,002,844 (-)Ensembl
Ensembl Acc Id: ENST00000769259
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,960,416 - 49,970,298 (-)Ensembl
Ensembl Acc Id: ENST00000769260
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,318 (-)Ensembl
Ensembl Acc Id: ENST00000769261
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,312 (-)Ensembl
Ensembl Acc Id: ENST00000769262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,290 (-)Ensembl
Ensembl Acc Id: ENST00000769263
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,289 (-)Ensembl
Ensembl Acc Id: ENST00000769264
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,001,298 (-)Ensembl
Ensembl Acc Id: ENST00000769265
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000769266
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 50,001,152 (-)Ensembl
Ensembl Acc Id: ENST00000769267
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,030,920 - 50,040,605 (-)Ensembl
Ensembl Acc Id: ENST00000769268
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,973,173 - 49,982,796 (-)Ensembl
Ensembl Acc Id: ENST00000769269
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,556 - 50,001,162 (-)Ensembl
Ensembl Acc Id: ENST00000769270
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 50,000,948 (-)Ensembl
Ensembl Acc Id: ENST00000769271
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,561 - 50,000,916 (-)Ensembl
Ensembl Acc Id: ENST00000769272
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,973,173 - 49,982,495 (-)Ensembl
Ensembl Acc Id: ENST00000769273
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,308 - 50,011,343 (-)Ensembl
Ensembl Acc Id: ENST00000769274
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,311 - 50,011,343 (-)Ensembl
Ensembl Acc Id: ENST00000769275
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,007,316 - 50,011,335 (-)Ensembl
Ensembl Acc Id: ENST00000769276
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,999,684 - 50,003,408 (-)Ensembl
Ensembl Acc Id: ENST00000769277
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,000,068 - 50,003,441 (-)Ensembl
Ensembl Acc Id: ENST00000769278
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,000,068 - 50,003,200 (-)Ensembl
Ensembl Acc Id: ENST00000769279
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,575 - 50,040,617 (-)Ensembl
Ensembl Acc Id: ENST00000769280
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,580 - 50,040,570 (-)Ensembl
Ensembl Acc Id: ENST00000769281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,574 - 50,040,237 (-)Ensembl
Ensembl Acc Id: ENST00000769282
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,060,123 - 50,062,775 (-)Ensembl
Ensembl Acc Id: ENST00000769283
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,578 - 50,040,209 (-)Ensembl
Ensembl Acc Id: ENST00000769284
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,038,111 - 50,040,525 (-)Ensembl
Ensembl Acc Id: ENST00000769285
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,037,579 - 50,039,880 (-)Ensembl
Ensembl Acc Id: ENST00000769286
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,038,370 - 50,040,604 (-)Ensembl
Ensembl Acc Id: ENST00000769287
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,103,347 - 50,105,121 (-)Ensembl
Ensembl Acc Id: ENST00000769288
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,103,438 - 50,105,103 (-)Ensembl
Ensembl Acc Id: ENST00000769289
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 49,993,101 (-)Ensembl
Ensembl Acc Id: ENST00000769290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 49,993,047 (-)Ensembl
Ensembl Acc Id: ENST00000769291
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,002,285 - 50,003,821 (-)Ensembl
Ensembl Acc Id: ENST00000769292
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,442 - 49,992,916 (-)Ensembl
Ensembl Acc Id: ENST00000769293
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,991,553 - 49,992,914 (-)Ensembl
Ensembl Acc Id: ENST00000769294
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,001,872 - 50,003,179 (-)Ensembl
Ensembl Acc Id: ENST00000769295
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,001,872 - 50,003,166 (-)Ensembl
Ensembl Acc Id: ENST00000769296
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,000,068 - 50,001,288 (-)Ensembl
Ensembl Acc Id: ENST00000769297
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,002,448 - 50,003,460 (-)Ensembl
Ensembl Acc Id: ENST00000769298
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,060,123 - 50,061,128 (-)Ensembl
Ensembl Acc Id: ENST00000769299
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,002,448 - 50,003,438 (-)Ensembl
Ensembl Acc Id: ENST00000769300
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,962,010 - 49,962,964 (-)Ensembl
Ensembl Acc Id: ENST00000769301
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,002,565 - 50,003,429 (-)Ensembl
Ensembl Acc Id: ENST00000769302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,668 - 49,982,515 (-)Ensembl
Ensembl Acc Id: ENST00000769303
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,981,681 - 49,982,509 (-)Ensembl
Ensembl Acc Id: ENST00000769304
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1450,002,565 - 50,003,302 (-)Ensembl
RefSeq Acc Id: NR_131171
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381450,007,313 - 50,105,043 (-)NCBI
CHM1_11450,412,171 - 50,510,446 (-)NCBI
T2T-CHM13v2.01444,212,500 - 44,311,279 (-)NCBI
Sequence:
Protein Sequences
GenBank Protein AAL58840 (Get FASTA)   NCBI Sequence Viewer  
  EAW65733 (Get FASTA)   NCBI Sequence Viewer  
  EAW65734 (Get FASTA)   NCBI Sequence Viewer  
  Q8WXQ3 (Get FASTA)   NCBI Sequence Viewer  

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8WXQ3-F1-model_v2 AlphaFold Q8WXQ3 1-324 view protein structure


Additional Information

Database Acc Id Source(s)
COSMIC LINC01599 COSMIC
Ensembl Genes ENSG00000214900 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000603228 ENTREZGENE
GTEx ENSG00000214900 GTEx
HGNC ID HGNC:27285 ENTREZGENE
Human Proteome Map LINC01599 Human Proteome Map
NCBI Gene 196913 ENTREZGENE
RNAcentral URS00008120FF RNACentral
UniProt CN183_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-25 LINC01599  long intergenic non-protein coding RNA 1599  C14orf183  chromosome 14 open reading frame 183  Symbol and/or name change 5135510 APPROVED
2011-07-27 C14orf183  chromosome 14 open reading frame 183  LOC196913  hypothetical protein LOC196913  Symbol and/or name change 5135510 APPROVED