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Gene: RGD1565166 (similar to MGC45438 protein) Rattus norvegicus
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Symbol: RGD1565166
Name: similar to MGC45438 protein
Description: Predicted to have protein homodimerization activity. Predicted to localize to the cytosol and membrane. Orthologous to human C16orf89 (chromosome 16 open reading frame 89); INTERACTS WITH bisphenol A; cefaloridine; methamphetamine.
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC287059; LOC287059; uncharacterized protein LOC287059; UPF0764 protein C16orf89 homolog
Orthologs:
Homo sapiens (human) : C16orf89 (chromosome 16 open reading frame 89)  HGNC  Alliance
Mus musculus (house mouse) : AU021092 (expressed sequence AU021092)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102027576 (chromosome unknown open reading frame, human C16orf89)
Pan paniscus (bonobo/pygmy chimpanzee) : C16H16orf89 (chromosome 16 C16orf89 homolog)
Canis lupus familiaris (dog) : C6H16orf89 (chromosome 6 C16orf89 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH16orf89 (chromosome unknown C16orf89 homolog)
Sus scrofa (pig) : C3H16orf89 (chromosome 3 C16orf89 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01010,555,337 - 10,564,433 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1010,555,337 - 10,564,433 (+)Ensembl
Rnor_5.0109,313,103 - 9,334,297 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41010,476,014 - 10,485,110 (+)NCBIRGSC3.4rn4RGSC3.4
Celera109,327,992 - 9,337,089 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RGD1565166
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565166
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.