Dctpp1-ps2 (dCTP pyrophosphatase 1, pseudogene 2) - Rat Genome Database

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Gene: Dctpp1-ps2 (dCTP pyrophosphatase 1, pseudogene 2) Rattus norvegicus
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Symbol: Dctpp1-ps2
Name: dCTP pyrophosphatase 1, pseudogene 2
RGD ID: 1565017
Description: INTERACTS WITH ammonium chloride; cefaloridine
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC306223; RGD1565017; similar to RS21-C6 protein
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8161,400,142 - 1,400,652 (-)NCBIGRCr8
mRatBN7.2161,392,967 - 1,393,868 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0163,935,374 - 3,936,145 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0163,900,215 - 3,900,725 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4161,429,516 - 1,430,026 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera161,371,017 - 1,371,788 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638712345387123Rat
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1638712345387123Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133425095Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139568015Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139568015Rat
631524Bp75Blood pressure QTL 750.05arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)161177108157035Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
12903955Kidm69Kidney mass QTL 690.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)168392304234212Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126734272Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16126734272Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126734272Rat

Markers in Region
RH137254  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2161,393,442 - 1,393,662 (-)MAPPERmRatBN7.2
Rnor_6.0163,935,806 - 3,936,025NCBIRnor6.0
Rnor_5.0163,900,421 - 3,900,640UniSTSRnor5.0
RGSC_v3.4161,429,601 - 1,429,820UniSTSRGSC3.4
Celera161,371,137 - 1,371,356UniSTS
Cytogenetic Map16p16UniSTS
Cytogenetic Map1q36UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-12266 BioCyc
NCBI Gene 306223 ENTREZGENE
PhenoGen Dctpp1-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Dctpp1-ps2  dCTP pyrophosphatase 1, pseudogene 2  RGD1565017  similar to RS21-C6 protein  Symbol and Name Changed 1299863 APPROVED
2008-04-30 RGD1565017  similar to RS21-C6 protein   RGD1565017_predicted  similar to RS21-C6 protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1565017_predicted  similar to RS21-C6 protein (predicted)  LOC306223  similar to RS21-C6 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC306223  similar to RS21-C6 protein      Symbol and Name status set to provisional 70820 PROVISIONAL