Advanced Search (OLGA)

Gene: Spmap2l (sperm microtubule associated protein 2 like) Mus musculus

Subscribe to Updates

Analyze

Symbol:

Spmap2l

Name:

sperm microtubule associated protein 2 like

RGD ID:

1557757

MGI Page

MGI

Description:

Is expressed in ductus deferens and testis. Orthologous to human SPMAP2L (sperm microtubule associated protein 2 like).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1700023E05Rik; hypothetical protein LOC71868; sperm microtubule associated protein 2-like; testicular haploid expressed gene protein-like; theg spermatid protein like; Thegl; uncharacterized protein LOC71868

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	77,163,879 - 77,209,382 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	77,163,870 - 77,209,376 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	77,016,023 - 77,061,541 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	77,016,023 - 77,061,529 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	77,445,048 - 77,490,547 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	78,090,798 - 78,136,297 (+)	NCBI		MGSCv36	mm8
Celera	5	74,283,908 - 74,329,837 (+)	NCBI		Celera
Cytogenetic Map	5	C3.3	NCBI
cM Map	5	41.45	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	congenital disorder of glycosylation type IIk		ISO	SPMAP2L (Homo sapiens)	8554872	ClinVar Annotator: match by term: TMEM165-CDG	ClinVar	PMID:28492532
Spmap2l	Mouse	gastrointestinal stromal tumor		ISO	SPMAP2L (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:1279971 more ...

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	17beta-estradiol 3-benzoate	increases methylation	ISO	Spmap2l (Rattus norvegicus)	6480464	estradiol 3-benzoate results in increased methylation of SPMAP2L promoter	CTD	PMID:27415467
Spmap2l	Mouse	4,4'-sulfonyldiphenol	decreases methylation	EXP		6480464	bisphenol S results in decreased methylation of SPMAP2L exon	CTD	PMID:33297965
Spmap2l	Mouse	acetamide	increases expression	ISO	Spmap2l (Rattus norvegicus)	6480464	acetamide results in increased expression of SPMAP2L mRNA	CTD	PMID:31881176
Spmap2l	Mouse	Aflatoxin B2 alpha	decreases methylation	ISO	SPMAP2L (Homo sapiens)	6480464	aflatoxin B2 results in decreased methylation of SPMAP2L intron	CTD	PMID:30157460
Spmap2l	Mouse	atrazine	affects methylation	ISO	Spmap2l (Rattus norvegicus)	6480464	Atrazine affects the methylation of SPMAP2L gene	CTD	PMID:35440735
Spmap2l	Mouse	benzo[a]pyrene	affects methylation	ISO	SPMAP2L (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of SPMAP2L intron	CTD	PMID:30157460
Spmap2l	Mouse	bisphenol A	decreases expression	ISO	Spmap2l (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of SPMAP2L mRNA	CTD	PMID:25181051
Spmap2l	Mouse	cadmium atom	multiple interactions	ISO	SPMAP2L (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of SPMAP2L mRNA	CTD	PMID:35301059
Spmap2l	Mouse	cadmium dichloride	multiple interactions	ISO	SPMAP2L (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of SPMAP2L mRNA	CTD	PMID:35301059
Spmap2l	Mouse	trichloroethene	decreases expression	ISO	Spmap2l (Rattus norvegicus)	6480464	Trichloroethylene results in decreased expression of SPMAP2L mRNA	CTD	PMID:33387578

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	biological_process	involved_in	ND		2290270		MGI	GO_REF:0000015

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	cellular_component	is_active_in	ND		2290270		MGI	GO_REF:0000015

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	molecular_function	enables	ND		2290270		MGI	GO_REF:0000015

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spmap2l	Mouse	increased circulating chloride level		IEA		5509061		MGI
Spmap2l	Mouse	no abnormal phenotype detected		IAGP		5509061		MGI	PMID:27357688
Spmap2l	Mouse	tremors		IEA		5509061		MGI

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:16141072	PMID:16141073	PMID:21677750	PMID:24194600	PMID:27357688	PMID:27626380	PMID:32325033	PMID:38355793

Spmap2l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	77,163,879 - 77,209,382 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	77,163,870 - 77,209,376 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	77,016,023 - 77,061,541 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	77,016,023 - 77,061,529 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	77,445,048 - 77,490,547 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	78,090,798 - 78,136,297 (+)	NCBI		MGSCv36	mm8
Celera	5	74,283,908 - 74,329,837 (+)	NCBI		Celera
Cytogenetic Map	5	C3.3	NCBI
cM Map	5	41.45	NCBI

SPMAP2L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	56,530,606 - 56,626,214 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	56,530,606 - 56,603,507 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	57,396,772 - 57,469,673 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Celera	4	54,902,790 - 54,976,066 (+)	NCBI		Celera
Cytogenetic Map	4	q12	NCBI
HuRef	4	53,350,873 - 53,423,556 (+)	NCBI		HuRef
CHM1_1	4	57,431,911 - 57,504,682 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	60,018,614 - 60,114,234 (+)	NCBI		T2T-CHM13v2.0

Spmap2l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	31,464,382 - 31,507,027 (-)	NCBI		GRCr8
mRatBN7.2	14	31,110,104 - 31,152,487 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	31,110,106 - 31,151,561 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	31,487,775 - 31,529,417 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	32,796,110 - 32,837,749 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	31,280,778 - 31,322,421 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	33,389,511 - 33,431,862 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	33,389,513 - 33,430,956 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	33,180,109 - 33,222,348 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	33,403,954 - 33,446,249 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	14	30,423,313 - 30,464,777 (-)	NCBI		Celera
Cytogenetic Map	14	p11	NCBI

Spmap2l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955447	14,454,884 - 14,496,320 (-)	NCBI	ChiLan1.0	ChiLan1.0

SPMAP2L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	73,168,842 - 73,248,284 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	73,374,351 - 73,453,802 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	67,317,663 - 67,392,019 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	73,888,059 - 73,961,523 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	73,888,059 - 73,961,523 (-)	Ensembl	panpan1.1		panPan2

SPMAP2L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	48,751,044 - 48,796,489 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	48,750,444 - 48,795,873 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	48,641,581 - 48,688,181 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	49,365,380 - 49,412,033 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	49,362,165 - 49,411,410 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	49,037,392 - 49,083,992 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	48,566,210 - 48,612,750 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	49,512,273 - 49,558,422 (+)	NCBI		UU_Cfam_GSD_1.0

Spmap2l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	27,495,065 - 27,552,081 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936482	18,746,254 - 18,802,934 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936482	18,746,254 - 18,802,958 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPMAP2L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	55,787,215 - 55,830,694 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	55,787,215 - 55,830,380 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	57,718,508 - 57,762,394 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPMAP2L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	12,017,163 - 12,098,983 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	12,017,396 - 12,098,871 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666066	12,690,794 - 12,773,567 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spmap2l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624761	12,839,260 - 12,895,886 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Spmap2l
2359 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	281
Count of miRNA genes:	190
Interacting mature miRNAs:	202
Transcripts:	ENSMUST00000031161, ENSMUST00000117880, ENSMUST00000118941
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4140990	Lgq6_m	late growth QTL 6 (mouse)			Not determined			32133234	100777931	Mouse
1301010	ahl2_m	age related hearing loss 2 (mouse)			Not determined		5	62650568	96650688	Mouse
14746981	Manh57_m	mandible shape 57 (mouse)					5	47169742	81169742	Mouse
12910784	Pwgrq15_m	post-weaning growth rate QTL 15 (mouse)					5	77175823	97658215	Mouse
1301524	Lmb2_m	lupus in MRL and B6 F2 cross (mouse)			Not determined		5	37581488	112465722	Mouse
25314315	Mlh1fc4_m	MLH1 foci count 4 (mouse)					5	74460661	132528839	Mouse
10045972	Tir5_m	trypanosome infection response 5 (mouse)			Not determined		5	63705442	104387065	Mouse
4141219	W10q16_m	weight 10 weeks QTL 16 (mouse)			Not determined			32133234	100777931	Mouse
10043962	Obq27_m	obesity QTL 27 (mouse)			Not determined		5	56285655	90285655	Mouse
12910816	Ogrq2_m	overall growth rate QTL 2 (mouse)					5	77175823	97658215	Mouse
1301691	Cdcs10_m	cytokine deficiency colitis susceptibility 10 (mouse)			Not determined		5	76280786	110280917	Mouse
11041665	Lmr24_m	leishmaniasis resistance 24 (mouse)					5	52694462	107321041	Mouse
1301693	Sle6_m	systemic lupus erythematosus susceptibility 6 (mouse)			Not determined		5	8890693	87841837	Mouse
26884395	Humsd2_m	humerus midshaft diameter 2, 10 week (mouse)					5	70057343	132528839	Mouse
11252124	Modvl6_m	modifier of vacuolated lens 6 (mouse)					5	62650568	96650688	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
10412069	Desp3_m	despair 3 (mouse)			Not determined		5	72932684	77246203	Mouse
13506928	Recrq8_m	recombination rate in male meiosis QTL 8 (mouse)					5	74460661	132528839	Mouse
1301843	Listr1_m	listeriosis resistance 1 (mouse)			Not determined		5	60246081	94246203	Mouse
10043993	Hbnr10_m	Heligmosomoides bakeri nematode resistance 10 (mouse)			Not determined		5	72418876	106419011	Mouse
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
4141438	Skmw13_m	skeletal muscle weight 13 (mouse)			Not determined		5	76190263	110190479	Mouse
1301713	Dbsty2_m	diabesity 2 (mouse)			Not determined		5	76445064	110445225	Mouse
11041899	Lmr24a_m	leishmaniasis resistance 24a (mouse)					5	52694462	107321041	Mouse
4142064	Tmc1m4_m	Tmc1 modifier 4 (mouse)			Not determined		5	54500177	127001072	Mouse
1300931	Cocrb6_m	cocaine related behavior 6 (mouse)			Not determined		5	76445064	110445225	Mouse
1301698	Pcfm4_m	periosteal circumference and femur length 4 (mouse)			Not determined		5	44585843	78585965	Mouse
4142317	Rgcs1_m	retinal ganglion cell susceptible 1 (mouse)			Not determined			55388334	108762627	Mouse
1301829	Thyls2_m	thymic lymphoma susceptibility 2 (mouse)			Not determined		5	76445064	110445225	Mouse
12904740	M1fscn2_m	modifier 1 of Fscn2 (mouse)					5	66529661	100529661	Mouse
4142428	Modvl1_m	modifier of vacuolated lens 1 (mouse)			Not determined			62650568	96650688	Mouse
1357431	Cia27_m	collagen induced arthritis 27 (mouse)			Not determined		5	75315348	120018629	Mouse
11040589	Lmr3a_m	leishmaniasis resistance 3a (mouse)					5	59602801	93602980	Mouse
11040590	Lmr3b_m	leishmaniasis resistance 3b (mouse)					5	59602801	93602980	Mouse
11040591	Lmr3c_m	leishmaniasis resistance 3c (mouse)					5	59602801	93602980	Mouse
12904739	M2fscn2_m	modifier 2 of FSCN2 (mouse)					5	66529661	100529661	Mouse
1301243	Bmd2_m	bone mineral density 2 (mouse)			Not determined		5	55388334	100455525	Mouse
13207584	Mwmlpt4_m	Morris water maze latency to platform, training, 4 (mouse)					5	46322606	80322606	Mouse
1300986	Hdlq2_m	HDL QTL 2 (mouse)			Not determined		5	76280786	110280917	Mouse
13207588	Mwmlpa4_m	Morris water maze latency to platform, all, 4 (mouse)					5	46322606	80322606	Mouse
11049560	Lmr24d_m	leishmaniasis resistance 24d (mouse)					5	64374877	98374996	Mouse
13464249	Ahl16_m	age related hearing loss, early onset 16 (mouse)					5	76445064	110445225	Mouse
13464248	Ahl13_m	age related hearing loss, early onset 13 (mouse)					5	55645874	89645995	Mouse
13464250	Ahl15_m	age related hearing loss, early onset 15 (mouse)					5	62650568	96650688	Mouse
11040592	Lmr3d_m	leishmaniasis resistance 3d (mouse)					5	59602801	93602980	Mouse
13464247	Ahl14_m	age related hearing loss, early onset 14 (mouse)					5	60403062	94403160	Mouse
4141124	Dshv2_m	dorsal hippocampal volume 2 (mouse)			Not determined		5	75315348	98019803	Mouse
10044005	Ahl7_m	age related hearing loss 7 (mouse)			Not determined		5	58330502	92330641	Mouse
4141505	Chlq14_m	circulating hormone level QTL 14 (mouse)			Not determined		5	76280786	110280917	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001417738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001417739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001417740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_027970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC165975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK006270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC053422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000031161 ⟹ ENSMUSP00000031161

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,163,870 - 77,209,369 (+)	Ensembl
GRCm38.p6 Ensembl	5	77,016,023 - 77,061,522 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000117880 ⟹ ENSMUSP00000112814

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,163,870 - 77,209,376 (+)	Ensembl
GRCm38.p6 Ensembl	5	77,016,023 - 77,061,529 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000118941 ⟹ ENSMUSP00000112660

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,184,901 - 77,195,342 (+)	Ensembl
GRCm38.p6 Ensembl	5	77,037,054 - 77,047,495 (+)	Ensembl

RefSeq Acc Id:

NM_001417738 ⟹ NP_001404667

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,184,910 - 77,209,382 (+)	NCBI

RefSeq Acc Id:

NM_001417739 ⟹ NP_001404668

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,163,879 - 77,195,553 (+)	NCBI

RefSeq Acc Id:

NM_001417740 ⟹ NP_001404669

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,184,910 - 77,195,553 (+)	NCBI

RefSeq Acc Id:

NM_027970 ⟹ NP_082246

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,163,879 - 77,209,382 (+)	NCBI
GRCm38	5	77,016,023 - 77,061,522 (+)	NCBI
MGSCv37	5	77,445,048 - 77,490,547 (+)	RGD
Celera	5	74,283,908 - 74,329,837 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

GGCGGGGGCGGAGCTGAGGCTGTCCCGGGCAGGGCGCCGGCGGCCCCGAATCACCTGTCCACTCCGCGAACTGAGTTTGGGCGGCTGGCGGAGAGTTTGAGAGCCGGGTAGCCGGAGCTTCTAACCGG
AATGGAGGAAGGAGACTTCTCAGGTTCATCCGTGCGATCCGAGGTGACGGATGGGCGGAACACCACGACCACGACAGAAACACGCACAACCTCTGAACTCCAACCGAAGCCCCTTGTGCTCAGGCTCC
TGGAGGTGCAGAATGGTGACGAGGCCGAAGCGGTTGGGGAGGAAGGACAAGAAGAGGACTACGAAGGGTCCAAGACTCACAAATCCCATGAGGTCTCCGCATCCTTCAGATCCCACAACTCCAGCGAT
CCTCCCCAGTCCCGCAAGGCCAGTGATTCCCTCCGGTCTCGCAAGGGCATTGAGCCCCTGGAGCCCCGCAAGACCAGTGATTCCTTCCGGTCCCTAATGGGCAGTGATCCCCTTCAGTCATCCGAGCG
CCAGGAGGATGGAAAAGATGATTTGTTTCCCAACGCAGTGATTATGACCTCCCCATCTTTGATAGCCAGATACCTACCACGGCTCCAGCTGGCTTCTCTGAGAGCACACCCAGTTACCCGTGACCTTG
TAAAGAAATGTTTTTATTCTAGGAAAAGAGTTCAAGATCTTTCTAAACCGAAAAAGCAATGGGGAACTCCGGACAGGAGGCTGTTTTGGGGAAATCAAGATCCCATTCGCCCTGTTTCTGAGGCTGCT
TTGAAAGCTAAGCTATCCAAGAGAATTGAGGACCTTGCTCAGCCCAGGCTGGTCTCCCGACATTATGTCCCTAACAGAATTCAATATTACTACAGCTGCGGAAGAGAGTCTGTTATCTGGGAGATCTC
TCCTCCTGCGCTGGTTACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCGTTACTCTGATCCTTCTC
CCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAACCAAGATTTCCTTCTCTACCCTGAGTGCTGTTGCAACTCCAAGGATTGTAGACCTTGCC
CACCCAAGGATTAAGATAGAGGGCCTATGCTATGAAAGAGAAAGGAGTGAATTGCCCATCCGTCCCGTAGCCCCTGCTGCCCTACTTGCTAATCCTAGTAAAAGAACGATATTTCTAGCAAAGTCCAA
GCGTGTTCATGAAGACTATCTCCCTATCCGAGATGCTCGGTGGCCTGTATCTTACGCTGCGACTCATTCTCAGGTGTCTGAGAGAGTCCAGGAGTTAGCTAATCCACACACAAGGGGTCCAGCGAACC
TTGTATACTACGACCCAAACGTCTTTAAAGTCAAGCCTTCTGCTTTAAAAGCACACTGTTCCGACAGGGTCAAGGAGCTGGCGGAACCCATTGTGCGTTAACTACGGCAAGCCACCCCAGGTAGACAC
AAGTTAGGTATCTAGACCGTGCGGCAGATAACTTTGTTCCCAGCCTTGGTATTTACATCTTACTGATCACCTCCCAGACATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGT
GATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAAAAGAAAGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence


Protein RefSeqs	NP_001404667	(Get FASTA)	NCBI Sequence Viewer
	NP_001404668	(Get FASTA)	NCBI Sequence Viewer
	NP_001404669	(Get FASTA)	NCBI Sequence Viewer
	NP_082246	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH53422	(Get FASTA)	NCBI Sequence Viewer
	BAB24494	(Get FASTA)	NCBI Sequence Viewer
	EDL37924	(Get FASTA)	NCBI Sequence Viewer
	EDL37925	(Get FASTA)	NCBI Sequence Viewer
	EDL37926	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000031161
	ENSMUSP00000031161.5
	ENSMUSP00000112660
	ENSMUSP00000112814.2
GenBank Protein	Q9DA15	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_082246 ⟸ NM_027970
- Peptide Label:	isoform 1
- UniProtKB:	Q9DA15 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEEGDFSGSSVRSEVTDGRNTTTTTETRTTSELQPKPLVLRLLEVQNGDEAEAVGEEGQEEDYEGSKTHKSHEVSASFRSHNSSDPPQSRKASDSLRSRKGIEPLEPRKTSDSFRSLMGSDPLQSSER QEDGKDDLFPNAVIMTSPSLIARYLPRLQLASLRAHPVTRDLVKKCFYSRKRVQDLSKPKKQWGTPDRRLFWGNQDPIRPVSEAALKAKLSKRIEDLAQPRLVSRHYVPNRIQYYYSCGRESVIWEIS PPALVTRPSKRIQKLAKPNKFKAQSLIKRETVPGTTRYSDPSPRILRLSIAKGTNPSYLPPKTLETKISFSTLSAVATPRIVDLAHPRIKIEGLCYERERSELPIRPVAPAALLANPSKRTIFLAKSK RVHEDYLPIRDARWPVSYAATHSQVSERVQELANPHTRGPANLVYYDPNVFKVKPSALKAHCSDRVKELAEPIVR hide sequence

Ensembl Acc Id:

ENSMUSP00000112660 ⟸ ENSMUST00000118941

Ensembl Acc Id:

ENSMUSP00000031161 ⟸ ENSMUST00000031161

Ensembl Acc Id:

ENSMUSP00000112814 ⟸ ENSMUST00000117880

RefSeq Acc Id:	NP_001404668 ⟸ NM_001417739
- Peptide Label:	isoform 3

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9DA15-F1-model_v2	AlphaFold	Q9DA15	1-459	view protein structure

RGD ID:

6886966

Promoter ID:

EPDNEW_M6934

Type:

initiation region

Name:

Thegl_1

Description:

Mus musculus theg spermatid protein like , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	77,016,044 - 77,016,104	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000029248	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000031161	ENTREZGENE
	ENSMUST00000031161.11	UniProtKB/Swiss-Prot
	ENSMUST00000117880.8	UniProtKB/Swiss-Prot
	ENSMUST00000118941	ENTREZGENE
InterPro	THEG	UniProtKB/Swiss-Prot
	THEG-like	UniProtKB/Swiss-Prot
KEGG Report	mmu:71868	UniProtKB/Swiss-Prot
MGD	MGI:1919118	ENTREZGENE
NCBI Gene	71868	ENTREZGENE
PANTHER	PTHR15901	UniProtKB/Swiss-Prot
	TESTICULAR HAPLOID EXPRESSED GENE PROTEIN-LIKE	UniProtKB/Swiss-Prot
Pfam	THEG	UniProtKB/Swiss-Prot
PhenoGen	Spmap2l	PhenoGen
SMART	THEG	UniProtKB/Swiss-Prot
UniProt	D3YU57	ENTREZGENE, UniProtKB/TrEMBL
	Q9DA15	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-06-05	Spmap2l	sperm microtubule associated protein 2 like	Thegl	theg spermatid protein like	Symbol and/or name updated	27372883	PROVISIONAL
2015-06-30	Thegl	theg spermatid protein like	1700023E05Rik	RIKEN cDNA 1700023E05 gene	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Mammalian Phenotype

Send us a Message

Imported Disease Annotations - ClinVar

Mammalian Phenotype