Elmod2 (ELMO/CED-12 domain containing 2) - Rat Genome Database

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Gene: Elmod2 (ELMO/CED-12 domain containing 2) Mus musculus
Analyze
Symbol: Elmod2
Name: ELMO/CED-12 domain containing 2
RGD ID: 1550322
MGI Page MGI
Description: Predicted to enable GTPase activator activity. Predicted to be involved in regulation of defense response to virus. Is expressed in several structures, including adrenal gland; genitourinary system; gut gland; nervous system; and stomach. Orthologous to human ELMOD2 (ELMO domain containing 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9830169G11Rik; ELMO domain containing 2; ELMO domain-containing protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,039,261 - 84,059,115 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,039,261 - 84,059,115 (-)EnsemblGRCm39 Ensembl
GRCm38883,312,632 - 83,332,490 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,312,632 - 83,332,486 (-)EnsemblGRCm38mm10GRCm38
MGSCv37885,836,531 - 85,856,385 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,202,737 - 86,222,530 (-)NCBIMGSCv36mm8
Celera887,590,988 - 87,610,941 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Elmod2Mouselong QT syndrome  ISOELMOD2 (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:26132555

1 to 20 of 54 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Elmod2Mouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ELMOD2 mRNACTDPMID:36331819
Elmod2Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of ELMOD2 mRNACTDPMID:22206623
Elmod2Mouse1-chloro-2,4-dinitrobenzene affects bindingISOELMOD2 (Homo sapiens)6480464Dinitrochlorobenzene binds to ELMOD2 proteinCTDPMID:32991956
Elmod2Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOElmod2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ELMOD2 mRNACTDPMID:22808131
Elmod2Mouse3,4-methylenedioxymethamphetamine increases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of ELMOD2 mRNACTDPMID:20188158
Elmod2Mouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOELMOD2 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of ELMOD2 mRNACTDPMID:28628672
Elmod2Mouse4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of ELMOD2 mRNACTDPMID:39298647
Elmod2Mouse4,4'-sulfonyldiphenol multiple interactionsISOElmod2 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of ELMOD2 mRNACTDPMID:36041667
Elmod2Mouse4-hydroxyphenyl retinamide decreases expressionEXP 6480464Fenretinide results in decreased expression of ELMOD2 mRNACTDPMID:28973697
Elmod2Mouseacrylamide increases expressionISOElmod2 (Rattus norvegicus)6480464Acrylamide results in increased expression of ELMOD2 mRNACTDPMID:28959563
Elmod2Mouseacrylamide increases expressionEXP 6480464Acrylamide results in increased expression of ELMOD2 mRNACTDPMID:30807115
Elmod2Mouseaflatoxin M1 decreases expressionISOELMOD2 (Homo sapiens)6480464Aflatoxin M1 results in decreased expression of ELMOD2 mRNACTDPMID:30928695
Elmod2Mouseall-trans-retinoic acid decreases expressionISOELMOD2 (Homo sapiens)6480464Tretinoin results in decreased expression of ELMOD2 mRNACTDPMID:33167477
Elmod2Mousearistolochic acid A decreases expressionISOELMOD2 (Homo sapiens)6480464aristolochic acid I results in decreased expression of ELMOD2 mRNACTDPMID:33212167
Elmod2Mousebenzo[a]pyrene increases mutagenesisISOELMOD2 (Homo sapiens)6480464Benzo(a)pyrene results in increased mutagenesis of ELMOD2 geneCTDPMID:25435355
Elmod2Mousebenzo[a]pyrene increases expressionISOELMOD2 (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of ELMOD2 mRNACTDPMID:21632981
Elmod2Mousebisphenol A increases expressionISOElmod2 (Rattus norvegicus)6480464bisphenol A results in increased expression of ELMOD2 mRNACTDPMID:25181051
Elmod2Mousebisphenol A multiple interactionsISOElmod2 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of ELMOD2 mRNACTDPMID:36041667
Elmod2Mousebisphenol A multiple interactionsISOELMOD2 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of ELMOD2 mRNACTDPMID:28628672
Elmod2Mousebisphenol AF increases expressionISOELMOD2 (Homo sapiens)6480464bisphenol AF results in increased expression of ELMOD2 proteinCTDPMID:34186270

1 to 20 of 54 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Elmod2Mouseregulation of defense response to virus involved_inISOUniProtKB:Q8IZ812290270 GO_CentralGO_REF:0000119
Elmod2Mouseregulation of defense response to virus involved_inISSUniProtKB:Q8IZ812290270 UniProtGO_REF:0000024

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Elmod2MouseGTPase activator activity enablesIBAPANTHER:PTN004383861 more ...2290270 GO_CentralGO_REF:0000033
Elmod2MouseGTPase activator activity enablesISOUniProtKB:Q8IZ812290270 GO_CentralGO_REF:0000119
Elmod2MouseGTPase activator activity enablesISSUniProtKB:Q8IZ812290270 UniProtGO_REF:0000024


#
Reference Title
Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:21873635   PMID:24194600   PMID:28324667  
PMID:32554809   PMID:32614697   PMID:33596093   PMID:34321999   PMID:38355793  



Elmod2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,039,261 - 84,059,115 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,039,261 - 84,059,115 (-)EnsemblGRCm39 Ensembl
GRCm38883,312,632 - 83,332,490 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,312,632 - 83,332,486 (-)EnsemblGRCm38mm10GRCm38
MGSCv37885,836,531 - 85,856,385 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,202,737 - 86,222,530 (-)NCBIMGSCv36mm8
Celera887,590,988 - 87,610,941 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.72NCBI
ELMOD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384140,524,168 - 140,553,770 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4140,524,168 - 140,553,770 (+)EnsemblGRCh38hg38GRCh38
GRCh374141,445,322 - 141,474,924 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364141,664,802 - 141,691,297 (+)NCBINCBI36Build 36hg18NCBI36
Build 344141,802,956 - 141,829,448NCBI
Celera4138,775,314 - 138,804,916 (+)NCBICelera
Cytogenetic Map4q31.1NCBI
HuRef4137,175,768 - 137,205,375 (+)NCBIHuRef
CHM1_14141,422,647 - 141,452,270 (+)NCBICHM1_1
T2T-CHM13v2.04143,843,841 - 143,873,475 (+)NCBIT2T-CHM13v2.0
Elmod2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,690,713 - 41,710,194 (+)NCBIGRCr8
mRatBN7.21924,786,166 - 24,805,626 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1837,761,420 - 37,763,069 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1924,786,241 - 24,805,130 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,605,252 - 31,624,687 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01932,259,658 - 32,279,093 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,477,735 - 34,497,147 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,467,964 - 24,487,445 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,467,964 - 24,487,396 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,445,968 - 35,465,442 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,504,959 - 26,524,391 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,511,046 - 26,525,434 (+)NCBI
Celera1924,325,863 - 24,345,288 (+)NCBICelera
Cytogenetic Map19q11NCBI
Elmod2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,287,340 - 3,308,733 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,289,593 - 3,308,927 (-)NCBIChiLan1.0ChiLan1.0
ELMOD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23138,400,325 - 138,430,004 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14138,787,965 - 138,818,906 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04132,885,722 - 132,915,379 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14144,195,144 - 144,224,783 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4144,195,144 - 144,224,783 (+)Ensemblpanpan1.1panPan2
ELMOD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1192,294,413 - 2,324,715 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl192,297,847 - 2,327,500 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha192,541,045 - 2,572,267 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0192,358,893 - 2,390,169 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl192,358,899 - 2,390,148 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1192,296,052 - 2,327,304 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0192,657,239 - 2,688,530 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0193,013,255 - 3,044,489 (-)NCBIUU_Cfam_GSD_1.0
Elmod2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530149,834,188 - 49,866,116 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365357,274,987 - 7,297,987 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365357,271,528 - 7,299,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ELMOD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl886,527,542 - 86,546,654 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1886,527,970 - 86,546,652 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2891,962,171 - 91,979,735 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ELMOD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1787,456,626 - 87,486,523 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl787,456,645 - 87,486,515 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603766,983,615 - 67,012,628 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Elmod2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004625006123,502 - 147,483 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004625006123,036 - 144,876 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Elmod2
1657 total Variants

Predicted Target Of
Summary Value
Count of predictions:2939
Count of miRNA genes:750
Interacting mature miRNAs:1000
Transcripts:ENSMUST00000053902, ENSMUST00000126079, ENSMUST00000139041, ENSMUST00000141565, ENSMUST00000150124, ENSMUST00000177594
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse

1 to 10 of 36 rows





1 to 16 of 16 rows
RefSeq Transcripts NM_001170691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

Ensembl Acc Id: ENSMUST00000053902   ⟹   ENSMUSP00000052287
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,039,651 - 84,059,115 (-)Ensembl
GRCm38.p6 Ensembl883,313,022 - 83,332,486 (-)Ensembl
Ensembl Acc Id: ENSMUST00000126079
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,055,324 - 84,059,033 (-)Ensembl
GRCm38.p6 Ensembl883,328,695 - 83,332,404 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139041   ⟹   ENSMUSP00000147732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,044,394 - 84,058,083 (-)Ensembl
GRCm38.p6 Ensembl883,317,765 - 83,331,454 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141565
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,050,851 - 84,059,033 (-)Ensembl
GRCm38.p6 Ensembl883,324,222 - 83,332,404 (-)Ensembl
Ensembl Acc Id: ENSMUST00000150124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,042,116 - 84,051,255 (-)Ensembl
GRCm38.p6 Ensembl883,315,487 - 83,324,626 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177594   ⟹   ENSMUSP00000137044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,039,261 - 84,059,115 (-)Ensembl
GRCm38.p6 Ensembl883,312,632 - 83,332,486 (-)Ensembl
RefSeq Acc Id: NM_001170691   ⟹   NP_001164162
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,039,261 - 84,059,115 (-)NCBI
GRCm38883,312,632 - 83,332,486 (-)ENTREZGENE
MGSCv37885,836,531 - 85,856,385 (-)RGD
Celera887,590,988 - 87,610,941 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_178736   ⟹   NP_848851
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,039,261 - 84,059,115 (-)NCBI
GRCm38883,312,632 - 83,332,486 (-)ENTREZGENE
MGSCv37885,836,531 - 85,856,385 (-)RGD
Celera887,590,988 - 87,610,941 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530979   ⟹   XP_006531042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,039,656 - 84,058,730 (-)NCBI
GRCm38883,313,027 - 83,332,464 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154033   ⟹   XP_036009926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,039,655 - 84,058,593 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934824
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,039,656 - 84,059,113 (-)NCBI
Sequence:
RefSeq Acc Id: NP_848851   ⟸   NM_178736
- UniProtKB: Q6AXC7 (UniProtKB/Swiss-Prot),   Q8BHP5 (UniProtKB/Swiss-Prot),   Q8BGF6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001164162   ⟸   NM_001170691
- UniProtKB: Q6AXC7 (UniProtKB/Swiss-Prot),   Q8BHP5 (UniProtKB/Swiss-Prot),   Q8BGF6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531042   ⟸   XM_006530979
- Peptide Label: isoform X1
- UniProtKB: Q6AXC7 (UniProtKB/Swiss-Prot),   Q8BHP5 (UniProtKB/Swiss-Prot),   Q8BGF6 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000147732   ⟸   ENSMUST00000139041
Ensembl Acc Id: ENSMUSP00000137044   ⟸   ENSMUST00000177594
ELMO

Name Modeler Protein Id AA Range Protein Structure
AF-Q8BGF6-F1-model_v2 AlphaFold Q8BGF6 1-293 view protein structure

RGD ID:8667593
Promoter ID:EPDNEW_M11828
Type:initiation region
Name:Elmod2_1
Description:Mus musculus ELMO/CED-12 domain containing 2 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,332,435 - 83,332,495EPDNEW
RGD ID:6843070
Promoter ID:MM_KWN:54995
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2
Transcripts:OTTMUST00000077064
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36885,855,211 - 85,855,711 (-)MPROMDB
RGD ID:6843069
Promoter ID:MM_KWN:54996
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001170691,   NM_178736,   OTTMUST00000077062
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36885,856,246 - 85,856,746 (-)MPROMDB


1 to 24 of 24 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000035151 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000053902 ENTREZGENE
  ENSMUST00000053902.4 UniProtKB/Swiss-Prot
  ENSMUST00000177594 ENTREZGENE
  ENSMUST00000177594.8 UniProtKB/Swiss-Prot
InterPro ELMO_dom UniProtKB/Swiss-Prot
  ELMO_domain-containing UniProtKB/Swiss-Prot
KEGG Report mmu:244548 UniProtKB/Swiss-Prot
MGD MGI:2445165 ENTREZGENE
NCBI Gene 244548 ENTREZGENE
PANTHER ENGULFMENT AND CELL MOTILITY UniProtKB/Swiss-Prot
  PTHR12771:SF47 UniProtKB/Swiss-Prot
Pfam ELMO_CED12 UniProtKB/Swiss-Prot
PhenoGen Elmod2 PhenoGen
PROSITE ELMO UniProtKB/Swiss-Prot
UniProt A0A1B0GRZ8_MOUSE UniProtKB/TrEMBL
  ELMD2_MOUSE UniProtKB/Swiss-Prot
  Q6AXC7 ENTREZGENE
  Q8BGF6 ENTREZGENE
  Q8BHN8_MOUSE UniProtKB/TrEMBL
  Q8BHP4_MOUSE UniProtKB/TrEMBL
  Q8BHP5 ENTREZGENE
UniProt Secondary Q6AXC7 UniProtKB/Swiss-Prot
  Q8BHP5 UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-31 Elmod2  ELMO/CED-12 domain containing 2  Elmod2  ELMO domain containing 2  Symbol and/or name change 5135510 APPROVED