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Gene: RREB1 (ras responsive element binding protein 1) Sus scrofa

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Symbol:

RREB1

Name:

ras responsive element binding protein 1

RGD ID:

14280859

Description:

ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of brown fat cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); microcephaly (ortholog); RASopathy (ortholog); FOUND IN fibrillar center (ortholog); nuclear speck (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ras-responsive element-binding protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	4,512,286 - 4,639,961 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	4,478,004 - 4,652,467 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

microcephaly (ISO)

RASopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of brown fat cell differentiation (ISO)

positive regulation of epithelial cell migration (ISO)

positive regulation of lamellipodium morphogenesis (ISO)

positive regulation of mammary gland epithelial cell proliferation (ISO)

positive regulation of substrate adhesion-dependent cell spreading (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

positive regulation of wound healing, spreading of epidermal cells (ISO)

Cellular Component

fibrillar center (ISO)

nuclear speck (ISO)

Molecular Function

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (ISO)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

RREB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	4,512,286 - 4,639,961 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	4,478,004 - 4,652,467 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RREB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	7,107,743 - 7,251,980 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	7,107,597 - 7,251,980 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	7,107,976 - 7,252,213 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	7,053,263 - 7,196,194 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	7,084,476 - 7,196,194	NCBI
Celera	6	8,337,583 - 8,481,974 (+)	NCBI		Celera
Cytogenetic Map	6	p24.3	NCBI
HuRef	6	6,984,113 - 7,128,514 (+)	NCBI		HuRef
CHM1_1	6	7,109,932 - 7,254,330 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	6,977,349 - 7,121,600 (+)	NCBI		T2T-CHM13v2.0

Rreb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	37,962,362 - 38,135,981 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	37,962,376 - 38,135,981 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	37,778,382 - 37,952,005 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	37,778,400 - 37,952,005 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	37,917,907 - 38,043,874 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	37,833,505 - 37,959,468 (+)	NCBI		MGSCv36	mm8
Celera	13	38,946,939 - 39,073,602 (+)	NCBI		Celera
Cytogenetic Map	13	A3.3	NCBI
cM Map	13	17.7	NCBI

Rreb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	27,082,217 - 27,208,061 (-)	NCBI		GRCr8
mRatBN7.2	17	26,876,687 - 27,002,554 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	26,876,697 - 27,002,615 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	26,734,931 - 26,860,866 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	28,338,506 - 28,464,419 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	26,683,567 - 26,809,800 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	27,539,137 - 27,718,878 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	27,539,133 - 27,665,266 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	33,125,272 - 33,251,491 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	33,130,948 - 33,187,331 (-)	NCBI
Celera	17	26,508,633 - 26,634,463 (-)	NCBI		Celera
Cytogenetic Map	17	p12	NCBI

Rreb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	6,570,522 - 6,636,934 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955465	6,572,593 - 6,757,423 (-)	NCBI	ChiLan1.0	ChiLan1.0

RREB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	21,747,574 - 21,892,126 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	17,744,041 - 17,888,548 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	6,945,205 - 7,089,757 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	7,160,933 - 7,356,556 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	7,257,875 - 7,356,544 (+)	Ensembl	panpan1.1		panPan2

RREB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	7,120,505 - 7,255,290 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	7,120,472 - 7,255,105 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	7,123,955 - 7,258,737 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	7,202,128 - 7,337,072 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	7,190,064 - 7,334,484 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	7,055,626 - 7,190,320 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	7,082,329 - 7,217,217 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	8,414,770 - 8,549,540 (+)	NCBI		UU_Cfam_GSD_1.0

Rreb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	17,052,502 - 17,233,119 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936534	5,324,430 - 5,385,707 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936534	5,321,488 - 5,390,612 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RREB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	64,938,831 - 65,084,975 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	64,938,800 - 65,009,057 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	7,066,464 - 7,212,615 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rreb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	18,259,884 - 18,382,648 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624756	18,259,884 - 18,383,344 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RREB1
4094 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005665552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU393598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU469365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01057791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005665552 ⟹ XP_005665609

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	4,512,286 - 4,639,961 (+)	NCBI

Sequence:

show sequence

AGAGGGGGAGAGCGAGTCTCCGAGCGTGCGGGCGAGGAAGCGGGGCGGGGGGCCGAGGCGGGGG
CCGGGACGACGACTGGGGCGCCGGGGTCGCCAGCTCGTCGCCCACCTCCCTCCCTGTGGGAGAA
GAGGAGGAGGGGAAGTGACTGCGGAGTTGATGAACTTTGCACATCCAGAAACGCCATTTTGATT
CCTTTTCCGGAACAAGTTTGCATCTCTCCTCGTTCTCTCCCCGAAGCCCACCGGTCCCTACTGC
ATCATGCCTGGGAGCCAAGCGCCCTGCCCCGCCGTTGCTCCCATCTGCTCCAGAGGCAGTGGCT
TTGAGGTGTGACCCTGTCCACGCTTGGGCCCAGCCAGCGCCAGCTCCTTGGTAAAGAGGAGCCA
GCTTGATAAGACGAAGAAAACAGTGTCAACGGGTGATACCACGAGAAGAACAAAAGAAGTGAAG
GCAGCCCCATTTCCTCCTCCTCGTGGACCAGCTCGAGCGGGGGAAGGTCTGCTGCTGGCCTGGC
GGTTGGGGCAGAGGATGGAGTTCTGTGGCCACGGCTTCCTGGACGTGTAAACCCTTGTCCCGAT
GACGTCAAGTTCGCCCGCTGGCTTGGAAGGTTCAGACCTGTCTTCCATCAACACCATGATGTCA
GCGGTCATGAGCGTGGGGAAGGTCGCCGAGAACGGAGGGAGCCCTCAGAACGTCAAGTCCCCCT
CGAAGCCTCCAGGACCAAATCGGATTGGCCGCAGGAACCAGGAAACGAAAGAGGAGCGGTCTTC
CTATAACTGTCCCCTGTGTGAGAAGATTTGCACCACGCAGCATCAGTTAACGATGCACATTCGC
CAGCACAACACGGACACTGGAGGGGCAGACCATTCATGCAGCATCTGTGGGAAGTCGCTGAGCT
CGGCCAGCTCCCTGGACCGCCACATGCTGGTACACTCTGGGGAGAGGCCTTACAAGTGCACTGT
GTGTGGCCAGTCTTTTACCACCAACGGGAACATGCACAGGCACATGAAGATTCATGAGAAGGAC
CCCAACAGCTCTACGGCTGCCACCCCTCCGTCCCCACTGAAGCGTAGGCGGCTGTCCTCCAAAA
GGAAACTGAGTCACGATGCAGAGTCAGAGAAGGAAGACCCAGCACCTGCTAAAAAGGTGGTGGA
GGACGGGCAGCCGGGTGACACGGACAAGAAGGGCGACGAAGTGTTTCACTGCCCGCTCTGCTTC
AAGGAGTTCGTGTGCAAGTACGGGCTGGAGACCCACATGGAGACCCACTCGGAGAACCCGCTGA
GATGTGACATTTGCTGCGTCACCTTCCGAACCCATCGAGGACTGCTGCGCCACAACGCGCTGGT
CCACAAGCAGCTTCCCAGGGACGCCATGGGAAGGCCCTTCATCCAGAGCAACCCCTCCATCCCT
GCCGGCTTCCACGACCTAGGGTTCACCGACTTCTCCTGTAGGAAGTTCCCTCGCATTTCTCAGG
CCTGGTGTGAAACGAACCTGCGCCGGTGCATCAGCGAGCAGCACCGTTTCGTCTGCGACACGTG
TGACAAGGCCTTCCCCATGCTCTCCTCGCTCACCCTGCACCAGCAGACCCACGTCGCTGCAGGC
CAAGGCCCTGCCCTGCCCGGTGACACCCTGGACCAGAAGGTCTTCCTGGCCTTGCTGGGCCTGC
AGCACACCACCGACGCCAGGCCTGCCCTGGCTGAGGAGCCACTGCCGGATGACAACCAAGCAAT
ACAGCTCCAGACACTCAAGTGTCAGCTACCTCAGGACCCTGGCTGCACCAGCTTGCTGAGTCTG
TCTCCTTTCGAAGCTGCTTCCCTGGGCGGGTCTCTCACCGTCCTCCCGGCCACCAAGGAGGGCA
TGAAGCGCCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGACAGCAGTATTGT
GGTCCAGCCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACATCCAGCAGATCCTGAAGATG
GCAGCCTCGGTGCCCCCGCAGATCAGTCTTCCGCCCCTGTCCAAGGCCCCAGCCGCCCCTCTGC
AGGCCATTTTCAAACACATGCCCCCTCTGAAGCCAAAGCCCCTGGTCACGCCGCGGACGGTGGT
GGCCACCTCCACGCCCCCGCCCCTCGTCAACGCCCAGCAGGCCTCCCCCGGCTGCATCAGCCCC
AGCCTGCCGCCGCCGCCGCTGAAGCTCCTCAAGGGCCCGNGGGAGGCCGCCTCCACCGCCCACC
TGCTGCAGCCCAAGGCGGGGGCCCAGCCCAGCGCGGCGGCGCCGCTCTTCTTGCCGCAGCAGCG
CGGAGAGCTGCCCGGCCAGGCCGAGATGAAGACGCAGCTGGAGCAGGACAGCATCATCGAGGCC
CTGCTGCCCCTGAGCATGGAGGCCAAGATCAAGCAGGAGATCACGGAGGGCGACCTCAAGGCCA
TCATGACGGGCCCCGGCGGCAAGAAGACGCCGGCCATGCGCAAGGTGCTCTACCCCTGCCGCTT
CTGCAACCAGGTGTTCGCCTTCTCCGGCGTGCTGCGTGCGCACGTGCGCTCCCACCTGGGCATC
TCGCCCTACCAGTGCAACATCTGCGACTACATCGCCGCCGACAAGGCCGCGCTCATCCGCCACC
TGCGCACGCACAGCGGCGAGCGGCCCTACATCTGCAAGATCTGCCACTACCCCTTCACGGTCAA
GGCCAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACGCGCAAGGACATCGAGAAG
AACATCGAGTACGTGACGAGCAGCGCGGCCGAGATGGTGGACGCCTTCTGCTCCCCGGACACGG
TGTGCCTGCTGTGCGGAGAGGACCTCAAGCACTACCGCGCCCTCCGCATCCACATGCGCTCGCA
CTGCGGCCGCGGCCTGGGCGGCTGCCCCAAAGCCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGC
GCCGCCTTCTCGGCCAAGCGCAACTGCATCCACCACGTCCTCAAGCAGCACATGCACGTGCCCG
AGCGCGACATCGAGAGCTACGTCCTGGCGGCCGACGGCCTGGGCACGGTCGACACGACCTCCGA
GGCCTCGGGGAGGGCAGAGGAGGGCAGTGGCGCTGCCTCGGGTGAGCGCAAACCCTTGGCCGCC
TTCCTGGAGCCCCAGAATGGCATTCTTCACGGGGGTCCCACCCAGCCGCTGCCCGCCCACGTCG
CCGTCAAAGTGGAGCCCACCGGCACCTTCCCAGTAGACTTCAACGAGCCCCTGGACTTCTCCCA
GAAGGGCCTGGCCCTGGTCCAAGTGAAGCAGGAGGTGGCAGCCTCCTTCCTGAGCCCCTCGGCC
TCGGCCCCCTACGAGGGCTTCATGGAGCCCATCGACCTCTCCATCCCCAAGAACCTCAGGAGAG
GGGACAAGGACGCTGCCGCCCCCGGGGACACCAAGAAGACTGAGCAGGACCCTGGGAACAGCGA
GCAGGCCGCTCCCTGTCCACCAGCCTGCTCCGCCCTGCCGGCGACCGTGGGGCCCAGCGGGGTC
CTGGAAAAGCCCGGGGCCCCGGCTGCGGTGGCCTCGGCAGCCAGCACCGTGGAAGCCGCCGCTC
CTTCCCTGCAGGGCTCTGTTCAGCTGGCCCTGCCCATCTACTCCTCCGCCCTGGTCAACAGCTC
CCCACTCCTGGGCAGCCCTACCCTCATGAGCAGCCCAGCCTTGCTGCGGCCACTGCGGCCCAAG
CCCCCCCTGCTCTTGCCAAAGCCCCCAGTGACAGAGGAGCTGCCCCCGCTGGCCTCCATCGCCC
AGATCATCTCCTCCGTGTCCTCCGCGCCCACCTTGCTGAAAGCCAAGGTGGCTGACCCGGGGCC
CACGGGCGCTGGCAGTAGCGCCACAGCCTCCGATGGTGTAGGGGGAGCCACCCCCAAAGCCACC
GCCGACGTCACCAGCCCAAAAGAATCCAGTGACCCATCCCCTGCTGCCAACAGCCCGGAGGCAG
CCTCGCCCACCGAGCAGGGACCAGCTGGCGTGTCAAAGAAGAGGGGCCGGAAACGGGGGNCGAG
GAGCCGGCCGCGTCCCAGTGGCAGCGTGGACCTGGACTCCAGCGGGGAGTTCGCCAGCATCGAG
AAGATGCTGGCCACCACGGACACCAACAAGTTCAGTCCGTTTCTGCAGAGCGCCGAGGACGACG
CTCAGGACGAGGTGGCCGCGGCCCCCGCGGAACACAACGGGCCCAGCGACGAGGAGCCGGGCAG
CCCTCCGGATGACAGGCTGCTGAGGGCGAAGCGGAACTCCTACGCCAACTGCCTGCAGAAGATC
AACTGCCCCCACTGCCCGCGGCTCTTCCCCTGGGCCAGCTCCCTGCAGAGGCACATGCTCACAC
ACACTGGTCAGAAACCCTTCCCTTGTCAAAAATGCGGTGCCTTCTTTTCCACCAAATCTAACTG
TGAACGCCACCAGTTGCGCAAACACGGAGTTACGGCCTGTTCCCTGAGAAGAAACGGGCTTATC
CCCCAGTCCAAAGAGAGTGATGTTGGAGCCCATGATAGCACAGACAGCCAGTCCGACCTGGAGG
CCTCGGCGGCCGGAGGCGAAGTGCTGGACCTCACCTCCCGGGAGAAGGAGCAGCCGGCACCAGA
GGGGGCCTCCGAGCCCAGCCCGGCCCCAGATGAGCTGGGGGCCGAGCAGGTGAAGCCAGCGGCC
GCCGGGGAGGAGAGGGCGGCCGAGGAGGACGTGGAGCGCGGGGAGGAGCGCGGGGAGGAACGGG
ACGAGGACGCCGAGGGCCCGGAGGAGGACACGGTCAGCAACAAGAGCCTGGACCTCAACCTCGC
CAGCAAGCTGATGGGCTTCAAGCTGGCCGAGGGCGAGGCGGGCGCAGGCCCGGCCCCGGACCAG
AAGCACGCCTGCCACGTCTGCGGCAAGAGCTTCAAGTTCCCCGGGACCCTCAGCCGCCACCGCA
AGGCCCACGGCCGCGAGGAGCCTGGGGACGAGAGCGTGCCTCCCGGGAGGCGAGGGGCCGCGCC
CCCACCCCCGCCCCCCGGAGCCACCCCAGAGGCCGGCCGAGCCCCTGGGCGCCGGCCCCGGGGA
GGCGCGTCGGAAGCGCCTGTGGAGCAGCAGAGCGAGGAGGCGGACGGCCCCTCGGATGCGGACG
GGGAGGGCCCGGCCGAGAAGAAGTCCTCGGAGAAGAGCGACGACGACAAGAAGCCAAAGACAGA
CGCCCCCCGGAGCGCGGCCAGCAAGGCGGACAAGAGGAAGAAGGTGTGCGGCGTGTGCAGCAAG
AGGTTCTGGTCCCTGCAGGACCTGACCCGGCACATGAGGTCGCACACAGGCGAGAGGCCGTACA
AGTGTCAGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGGTCCA
CCAGAAAGCCCGGCACGCCAGACACCACGGGAAGGACAGCGACAAGGAGCGGGGCGAGGAGGAC
AGCGAGAGCGAGTCCACCCACAGCGGCAACAACCCCGTGTCGGAGAACGAGGCGGACTCGGCCC
TGCTCGCCAGCAACCACGTGGCCGTCACGCGGAGCCGGAAGGAGAGCCTGGCCTCCAAGGACGC
CGGCCGCCGGGAGGAGAGGGCGGCAGGCCGGACGGCGGGTGGCGGCGGCCAGGCCGCCGAGGGC
AGCCCGGAGGAGCAGGCGTCTCAGGGTGAGCCTGACCGGGAGAGCCCCGCGGCCNCCGCGCAGG
ACCTGCCGGCGCTGCCCGGCAAGAGGCCCGCCCACCCCATCCTGGCCGCCGATGGCGCCGCGCT
CCTGGGCATGGAGTGACGGCCGGCCTGCCCCCCAGCACACAGACGAAAGCCAGCAGAGCACCTT
GTCCGGGGGCTCCCTCCACGAGGTATCCCGGTGCCCTTCAGCTGTCGGGGGCAGCGGAGGGAGG
GAGCCAGGCGGGCCTCGCTCGGTGCCATAGCCTTACAGACCCGTGCGGGGATGGACCACGCGGG
ACCCGAGTGCCTTAACTACTACAGCCCTCTGGAGTCGTCCCGGGGGTTGTGTTTCCCACAAGGA
CTTTTTAAAAAAAACAAAGCAAGTATTTTAATGAATTATTCGGCGAGGACCTTTTCATTTAAGC
ATTAACGTTACCCTCTGTCCTGGTGTGTGAGCTTGTGCTTGTGAATCTGTGATCGTAGCATTTG
TTCTGTGAGCTGGAAGCAGAAGGAAAGGAGAACCCCTGCCCCCGGCTGCCCACGGCCGATAACT
GGAAGAAGGTGACCCGGACTGCATGTCCGTTCCCAGGGCCAGTGTGGACGAGAGGCTCCTTTCT
CAAAGAGACGTTTTTTTTTCCTCCCCGTTTGCTACTCAGTGGAGCTGTGGTTTGGTCCTCGGTA
TGTTGCAGGGTGTGGTTGAGGAAGGTTTCCGATTTGGTTCAAGCCAAAACCAGGGAAGATTCTA
GCTTCGACCTCCTACATGCATGCTTCCACTGTGTCAGCATTAGACGTGCTGTTACTGTTCCAGC
TCCTGACTTAGAAGAGAGTCACCCTGGCCACTGAACCACGGAAAACATGCATAGATGTCGTCTA
TCTGACCCCCCCTTGGTATATGTATTAATAATATTATTATTATTATTATTTGTACTTCATCAGT
TTGCTGGTCTCTGCAGTCAGCAGAAACGAATGGGCAATATTTGTCCTGGGAGACCTGGGCGCCC
CGGGTCCCCGCCTGAGCGTCCGCCCGCAGCTTTCCTTGGCTCCCCCGGGCGGCAGCTCTTCTAC
TGTACTTAGGCAAGCCTTTCTTCCGTGACTGCAGAACCCAGCAGGGGCCCTGCGGTCCTCCCGC
CCGAGGGGCCGAGGAGCAGCGGGGTTGCCCGGGGGGGTGGCTTCTGGGAAAGCCAGGCGGGCGA
GGACCTGTTGCTGGCCGGTCTTCCTGCCGAGCCCTGCCCAGGCCTCCCTGCCCGTGCTCCTGTC
CTTAGCAGAGCGAGGACGTACTACTACTGGTAATGAAACTGCACATGCGAGATGGAAGAGGAGA
AATAGATGTATGTGTACCTTCCTGTGATGTGGGGTTGGTGCTTGAAGATGAGCAGGTTGTCTCT
AGCCTCGGAAATCGCCTGAACCCCTGGGGCACAAAGGCAGGGTGTTCTTTTCGGGAGCACCCAG
CCCAGGCCATAGCGCCCTACTGTAGCCGCCAGCAGCGAAGAGAAACGTGTGCTACTGTCGCCCA
GCCGGACCCCTGGGTGCCTCGGTGCCTCGGGCCTCCCGAGCCCCCGCCCCGCCTCTGTCCTCCC
GCGCGCGCCCAGCCCGGGGGCTCCCTCTGTCTCCACTTCCTCGCCAGCTCCGGTGGCCAGAATC
CAGACGTCAAAGGAAGAAGGTGTGTGCCCTTGACATCATGAGAAAGTGGTGTCTTCACGTGTGA
GAGGAAACAGGCCGAGGCGGGTAGGAGTCTTCACTGTGTCAGGGGTGTGTGCACCAGCTTCCAG
ACGAGGTTGCATTTACTCTCAGTGGACACGAATCAGAACCAATGGTCCCCCCATCACGTCCCAC
CAAGCATGGCCTGCTGAGCTAAACCAGTTCATGCCTCCCTTAATTTTTTATGACGATTGTTGTT
GTTATTTTCGTTATTATTATTTGGGGTTTCTTGTGTTTTGGGTCTTCTTTGCAGCTCTCCACAC
TAAAACTCACAACGTCGTGGGGAGAAGCCATGGACTCTACGCTGGGGTGAGATGTGGCAGGAAC
CGGCCCCGCCGCCGGGGCCGGGGCGCCGCTGGCGATAGTCCGGGTCGGCGTAAAGCTTTATTTA
GCCTCCGTCTGCACCCTCGGAGTCCACAAGGTCTCGCCGCATCTTACTAGCGAGGTCGAGAGGC
GTAGCATTCGTTCGTTGCTCTGTCCCTCCCCCAATATTAAACTGTGAAATCCGTGATTTGTTTA
ACTCTGGGTGAATCATAGCTTAGTCTGCATGTCCAGCTAATTCGTTTCCATACATTTCGTTTGA
TTCTCTTTCTCCTTCTCTCAGGGCTTTTACAAAGAGAAATATATATATATATGGATCTTCTGAA
ACGTTTTTCGAGGTGCAAGTCTCTCTCTTTCGTTTTTTTCTCCTTGATTTATGGACACGATGCT
GAAATGCAATCACTACATGAAACTCCCGGCTGTGAAAACAAAACAAAAACCCCGAAGGGCTGTT
TTTTCCACCAGCCCCGGGGGAAGCTACGTGACAGTCGGGTGCCGGTGTCAGAAAGTTTCACCAT
TCTTTCCACCCTCTGTTCCTCTCTTTCCTCCAGAAGGAAGTTGATCCTGGTGATTTCAGCCCAA
TGCATTAAACAGGAAACAATAATAAATGTGTAGAATTCATATTTTTCTAAAGGGAACTTAAAAC
TGCTGCTACATGTTATGTACAAAACTGGTTTATGCCACATGAACAGAGAATCACAAGTTGCGTT
TTGGTACTTTTGTTCCTCTTTGTGTTCCGTTGTATAGTACTTCCAAATTCAAAATGAGAAGAAA
AGCTGTTCTGTATCAAACCATCTAAGCAATAAATGTTATATTTTAAAAACGGCAGGTTGCCAGT
CA

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Protein Sequences


Protein RefSeqs	XP_005665609	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000001092.4
	ENSSSCP00035029390.1
	ENSSSCP00035029401.1
	ENSSSCP00045022628.1
	ENSSSCP00045022712.1
	ENSSSCP00050025716.1

RefSeq Acc Id:

XP_005665609 ⟸ XM_005665552

- UniProtKB:

A0A8D1TGJ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTSSSPAGLEGSDLSSINTMMSAVMSVGKVAENGGSPQNVKSPSKPPGPNRIGRRNQETKEERS
SYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGERPYKCT
VCGQSFTTNGNMHRHMKIHEKDPNSSTAATPPSPLKRRRLSSKRKLSHDAESEKEDPAPAKKVV
EDGQPGDTDKKGDEVFHCPLCFKEFVCKYGLETHMETHSENPLRCDICCVTFRTHRGLLRHNAL
VHKQLPRDAMGRPFIQSNPSIPAGFHDLGFTDFSCRKFPRISQAWCETNLRRCISEQHRFVCDT
CDKAFPMLSSLTLHQQTHVAAGQGPALPGDTLDQKVFLALLGLQHTTDARPALAEEPLPDDNQA
IQLQTLKCQLPQDPGCTSLLSLSPFEAASLGGSLTVLPATKEGMKRLSLQPFQKGFIIQPDSSI
VVQPISGESAIELADIQQILKMAASVPPQISLPPLSKAPAAPLQAIFKHMPPLKPKPLVTPRTV
VATSTPPPLVNAQQASPGCISPSLPPPPLKLLKGPXEAASTAHLLQPKAGAQPSAAAPLFLPQQ
RGELPGQAEMKTQLEQDSIIEALLPLSMEAKIKQEITEGDLKAIMTGPGGKKTPAMRKVLYPCR
FCNQVFAFSGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTV
KANCERHLRKKHLKATRKDIEKNIEYVTSSAAEMVDAFCSPDTVCLLCGEDLKHYRALRIHMRS
HCGRGLGGCPKARKPFECKECSAAFSAKRNCIHHVLKQHMHVPERDIESYVLAADGLGTVDTTS
EASGRAEEGSGAASGERKPLAAFLEPQNGILHGGPTQPLPAHVAVKVEPTGTFPVDFNEPLDFS
QKGLALVQVKQEVAASFLSPSASAPYEGFMEPIDLSIPKNLRRGDKDAAAPGDTKKTEQDPGNS
EQAAPCPPACSALPATVGPSGVLEKPGAPAAVASAASTVEAAAPSLQGSVQLALPIYSSALVNS
SPLLGSPTLMSSPALLRPLRPKPPLLLPKPPVTEELPPLASIAQIISSVSSAPTLLKAKVADPG
PTGAGSSATASDGVGGATPKATADVTSPKESSDPSPAANSPEAASPTEQGPAGVSKKRGRKRGX
RSRPRPSGSVDLDSSGEFASIEKMLATTDTNKFSPFLQSAEDDAQDEVAAAPAEHNGPSDEEPG
SPPDDRLLRAKRNSYANCLQKINCPHCPRLFPWASSLQRHMLTHTGQKPFPCQKCGAFFSTKSN
CERHQLRKHGVTACSLRRNGLIPQSKESDVGAHDSTDSQSDLEASAAGGEVLDLTSREKEQPAP
EGASEPSPAPDELGAEQVKPAAAGEERAAEEDVERGEERGEERDEDAEGPEEDTVSNKSLDLNL
ASKLMGFKLAEGEAGAGPAPDQKHACHVCGKSFKFPGTLSRHRKAHGREEPGDESVPPGRRGAA
PPPPPPGATPEAGRAPGRRPRGGASEAPVEQQSEEADGPSDADGEGPAEKKSSEKSDDDKKPKT
DAPRSAASKADKRKKVCGVCSKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRHQRV
HQKARHARHHGKDSDKERGEEDSESESTHSGNNPVSENEADSALLASNHVAVTRSRKESLASKD
AGRREERAAGRTAGGGGQAAEGSPEEQASQGEPDRESPAAXAQDLPALPGKRPAHPILAADGAA
LLGME

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Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001021	UniProtKB/TrEMBL
	ENSSSCG00035054259	UniProtKB/TrEMBL
	ENSSSCG00045019222	UniProtKB/TrEMBL
	ENSSSCG00050043947	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000001114.4	UniProtKB/TrEMBL
	ENSSSCT00035072414.1	UniProtKB/TrEMBL
	ENSSSCT00035072431.1	UniProtKB/TrEMBL
	ENSSSCT00045032680.1	UniProtKB/TrEMBL
	ENSSSCT00045032783.1	UniProtKB/TrEMBL
	ENSSSCT00050059841.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	RREB1	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	RREB1	ENTREZGENE
PANTHER	RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1	UniProtKB/TrEMBL
	RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8D1A6T3_PIG	UniProtKB/TrEMBL
	A0A8D1AFV3_PIG	UniProtKB/TrEMBL
	A0A8D1HS25_PIG	UniProtKB/TrEMBL
	A0A8D1HS80_PIG	UniProtKB/TrEMBL
	A0A8D1TGJ4	ENTREZGENE, UniProtKB/TrEMBL
	F1RW79_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:92459	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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