ODAD3 (outer dynein arm docking complex subunit 3)

Gene: ODAD3 (outer dynein arm docking complex subunit 3) Sus scrofa

Analyze

Symbol:

ODAD3 (Ensembl: RGL3)

Name:

outer dynein arm docking complex subunit 3

RGD ID:

14276329

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); small GTPase binding (inferred); INVOLVED IN cilium movement (inferred); outer dynein arm assembly (inferred); Ras protein signal transduction (inferred); ASSOCIATED WITH alpha-mannosidosis (ortholog); Charcot-Marie-Tooth disease dominant intermediate B (ortholog); episodic ataxia type 2 (ortholog); FOUND IN cilium (inferred); plasma membrane (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ral guanine nucleotide dissociation stimulator like 3; ral guanine nucleotide dissociation stimulator-like 3; RGL3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	70,073,067 - 70,087,796 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	70,073,061 - 70,087,990 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	70,359,229 - 70,373,200 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alpha-mannosidosis (ISO)

Charcot-Marie-Tooth disease dominant intermediate B (ISO)

episodic ataxia type 2 (ISO)

genetic disease (ISO)

glutaric acidemia I (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium movement (IBA,IEA)

outer dynein arm assembly (IBA,IEA)

Ras protein signal transduction (IEA)

small GTPase-mediated signal transduction (IEA)

Cellular Component

ciliary basal body (IBA)

ciliary rootlet (IBA)

ciliary tip (IBA)

cilium (IEA)

plasma membrane (IEA)

Molecular Function

guanyl-nucleotide exchange factor activity (IEA)

protein binding (ISO)

small GTPase binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ODAD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	70,073,067 - 70,087,796 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	70,073,061 - 70,087,990 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	70,359,229 - 70,373,200 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RGL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	11,394,060 - 11,419,314 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	11,384,341 - 11,419,328 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	11,504,736 - 11,529,990 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	11,366,001 - 11,391,004 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	11,399,604 - 11,424,860 (-)	NCBI		Celera
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	11,080,677 - 11,105,452 (-)	NCBI		HuRef
CHM1_1	19	11,505,738 - 11,530,962 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	11,521,038 - 11,546,286 (-)	NCBI		T2T-CHM13v2.0

Rgl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	21,882,475 - 21,900,765 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	21,880,007 - 21,900,742 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	21,971,179 - 21,989,468 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	21,968,711 - 21,989,446 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	21,775,971 - 21,793,897 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	21,721,929 - 21,739,855 (-)	NCBI		MGSCv36	mm8
Celera	9	19,240,955 - 19,259,141 (-)	NCBI		Celera
Cytogenetic Map	9	A3	NCBI
cM Map	9	7.96	NCBI

Ralgdsl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	28,775,187 - 28,796,765 (-)	NCBI		GRCr8
mRatBN7.2	8	20,500,846 - 20,520,471 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	20,500,846 - 20,520,471 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	24,530,248 - 24,549,942 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	22,827,385 - 22,847,085 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	20,730,436 - 20,750,013 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	22,980,727 - 23,000,881 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	22,979,181 - 23,000,485 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	23,035,212 - 23,055,282 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	21,072,473 - 21,092,569 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	21,072,486 - 21,092,659 (-)	NCBI
Celera	8	21,891,406 - 21,910,979 (-)	NCBI		Celera
Cytogenetic Map	8	q13	NCBI

Rgl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	2,305,053 - 2,316,841 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	2,304,820 - 2,319,171 (-)	NCBI	ChiLan1.0	ChiLan1.0

RGL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	16,305,568 - 16,333,233 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	15,307,114 - 15,332,659 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	10,932,016 - 10,966,701 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	11,652,354 - 11,674,443 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	11,652,700 - 11,685,293 (-)	Ensembl	panpan1.1		panPan2

RGL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	49,926,916 - 49,942,013 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	49,925,185 - 49,942,130 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	49,798,045 - 49,813,150 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	50,445,230 - 50,460,344 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	50,445,290 - 50,460,440 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	49,655,510 - 49,670,638 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	50,081,655 - 50,097,001 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	50,324,843 - 50,339,959 (+)	NCBI		UU_Cfam_GSD_1.0

Rgl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	208,863,481 - 208,877,061 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936659	1,478,805 - 1,491,085 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936659	1,477,645 - 1,491,170 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RGL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	10,320,348 - 10,348,188 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666074	9,542,176 - 9,567,218 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rgl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	3,194,473 - 3,206,239 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624828	3,192,885 - 3,207,617 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ODAD3
189 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021083875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU855518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000014880 ⟹ ENSSSCP00000014479

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	70,073,067 - 70,087,796 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000078239 ⟹ ENSSSCP00000071347

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	70,087,887 - 70,096,924 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000100680 ⟹ ENSSSCP00000076746

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	70,087,887 - 70,096,924 (-)	Ensembl

RefSeq Acc Id:

XM_021083875 ⟹ XP_020939534

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	70,073,061 - 70,087,990 (-)	NCBI

Sequence:

show sequence

CTCACCCTGTCCCTCCAGAAAAATGGGAGATGCCTCCATACCTGGAGCAGACCAGCCCTCCCCA
TCTAAGGTCTCAAGTCTGTCCCCCACTTAGCTATACACACTCCCCCACACACCTAAGGACACAA
AAAAAGAGCCTGCCCCTAGGAGAGAGAGAGGGGCCTTTCTCCCGGTGCAGAATACACACCTATC
CGGAGAGCCCAGGCTTCTCCAGGGGCCTGGGCTGGGAGCTGGGGTCCCACAGGGATATCCGAGA
GCCCTGGGTCCACCCCGCTCCGCCCCCGCGCGGCCCGGCCGCCCCGCCCAGCCGGCCCAACGCC
CAGCCACTGCCCGCGACCCGCAGGCCCTTCCGCCTCACTCAGCCGCGTCGGCGGAGCGGGACGG
TTGCGGATCATGGAGCGGACAGCGGGCAAGGAGCTCGCCCTGGCACCGCTGCAGGACTGGGGTG
AGGAGACAGAGGACGGCGCGGTATACAGTGTCTCTCTGCGGCGGCAGCGAAGTCAGCGTTTGAG
TCTGGGGGCAGGCCCAGGGGGCACCCAGACCTCCAGCCCCGCTGCTGATACCTTCCTCCATTAC
CGCACCAGCAAGGTGCGGGCACTGAGGGCGGCACGGCTGGAGCGGCTGGTGCGGGAGTTGGTGT
CTGGGGATCGAGAGCAGGACCCGGGCTTTGTGCCTGCCTTCCTGGCCACCCACCGGGCTTTTGT
GCCCACTGCCCGCGTTCTGGGCCTTCTCCTGCCACCACCGCCACCGCCCCTGCCATCAGGGGTA
GAGCTCAAGAAGACAGAGGGAAGAGATCTGAGCTTGAACAAGAACTTGAGGGCTGTGGTGTCGG
TGCTGGGCTCCTGGCTGCGGGACCACCCTCAGGATTTCCAGGACCCCCCAGCCCACTCGGACCT
AGGCAGTGTCTGCACCTTTCTGAGCTGGGCAGCCCCATCAGGGGCTGAGGCCCAGGAGGCAGAA
AAGCTGCTGGGAGATTTCCTGGAGGAGGCTGAGCAAGAGCAGGAAGAAGAGGAGCAGTCCCAGC
CATGGGGAGGATCCCTAGGGGCTGCCCAGATCCCCTGTCCAGACTCCCCAGCAGGCTGCTTGGA
AGAGGAGGAAAGACTCGTGAGGGAAGGCCCTGAGCTCCTGGACTTCAGTGTAGACGAGGTGGCC
GAGCAGCTGACCCTGATGGATGTGGAGCTCTTCTCGCGCGTGCGACCCTGCGAGTGCCTGGGCT
CCGTGTGGTCGCAGCGAGACCGGCCGGGGGCCACAGGCACCGCCCCTACCGTGCGCGCCACTGT
GACCCAGTTCAACAGAGTGATCGGCTGCGTGCTGGGCTCGGTCCTTGGAGAGCCGGGCCTGGCT
GCCCCGCAGAGGGCGCAGCGGCTGGAGAAGTGGATCCGCATCGCCCAGCGCTGCCGGGAACTGC
GGAATTTCTCCTCCCTGCGTGCCATCCTGTCTGCTCTGCAGTCCAACCCCATCTACAGGCTCAA
GCGCAGCTGGGGGGCAGTGAGCCGGGAACCGTTATCTACTTTCAGGAAACTTTCGCAGATTTTC
TCCGATGAAAACAACCACCTCAGCAGCAGAGAGATTCTTTCCCAGGACGAGGCCACCAAGGCAT
CCCAAGAGGAGGACACCCCCCCAGGAAGCCTGCTCTCAAAACTGCCCCCAGGGCCTGTCCCCTA
CCTTGGCACCTTTCTCACGGACCTGGTTATGCTGGATACAGCCCTGCCGGACATACTGGAGGGG
GATCTCATCAACTTTGAGAAGAGGAGAAAGGAATGGGAGATCCTGGCCCGCATCCAGCAGCTGC
AGAGGCGCTGTCAGAGCTACTGCCTGAGCCCCCGCCTGCCTGTCCTGGCTGCCCTGCGTGCTCA
GTGCCAGCTCAGCGAGGAGCAGAGCTACCGCATCTCCCGTGTCATTGAGCCGCCGGCTGCCTCT
TGCCCCAGCTCCCCACGTGTCCGGCGGCGAATCAGCCTCACCAAGCGCCTCAGTGCGAAGCTGT
CCAGAGAGAGAGGCTCATCTCCTGGTGGGAGCCCTGGGGACCCCTCATTCTCCACCTCCAGTGT
GTCCCCAAGATCCCCCCCATCCAGTCCTATAACCAGGGACCCTCCAGCTGGCAGTCCTCCAGCC
TCTCCAGGGCCCCAGGGCCCCAGCATCAAGCTGCCCCTGAGCCCCGACCTGCCAGGCCCCCGGC
CCCTGGCCTTGCCCTTGAGTGGTCCTCGCATCCCTCTCCCTGGGCAGCAGGGCTCAGAGGCCCG
AGTCATCCGCATCAGCATCAACAATGACCATGGGAATCTGTATCGGAGCATCTTGCTCACTAGT
CAGGACAAGGCCCCCAGCGTGGTGCAGCGAGCCTTGGAAAAGCACAATGTGGCCCAGCCCTGGG
CCCGTGACTACCAGCTCTTTCAAGTCCTTCCTGGGGACAGGGAACTCCTGATTCCTGACAATGC
CAATGTCTTCTACGCAATGAGCCCAGCCGCCCCTGGAGATTTTGTGCTGCGGCGGAAGGAGATG
GTCCGGCACACGACTTCAATCTCCTCTGCCTGAAGTGGCTCTCCTCATCTTCTAGGACATGGCC
CCATGGGCAGAAAGGGGCCTGGCTTCTATCACCAGGGGGTGGGGAGGAGGCTGTTCCCTGGAAA
GCTCCCCTTTCCCCATAGAGGCCATTGTGCTCCATAACCTATAACTGCCCCCAACCTCACTGAA
CCCCATCCTTCTGACCCTCTTGGCACCAGATCCCTATTCCAAAGACATCAGGCCATGGGGTGGC
TGGTGGAGAACTCCATCCCATAAACATAGAAAGAGGCAGAGCATCGGGGGTCAGACTCTCCCCC
AAAGAAATCTTGTAACTGTTGCAGACCTTTCAGAAGCAACAGAAGTGGATGAAAATAGTGACCA
AAGTCATGAAACAGGA

hide sequence

RefSeq Acc Id:

XM_021083876 ⟹ XP_020939535

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	70,073,061 - 70,087,990 (-)	NCBI

Sequence:

show sequence

CTCACCCTGTCCCTCCAGAAAAATGGGAGATGCCTCCATACCTGGAGCAGACCAGCCCTCCCCA
TCTAAGGTCTCAAGTCTGTCCCCCACTTAGCTATACACACTCCCCCACACACCTAAGGACACAA
AAAAAGAGCCTGCCCCTAGGAGAGAGAGAGGGGCCTTTCTCCCGGTGCAGAATACACACCTATC
CGGAGAGCCCAGGCTTCTCCAGGGGCCTGGGCTGGGAGCTGGGGTCCCACAGGGATATCCGAGA
GCCCTGGGTCCACCCCGCTCCGCCCCCGCGCGGCCCGGCCGCCCCGCCCAGCCGGCCCAACGCC
CAGCCACTGCCCGCGACCCGCAGGCCCTTCCGCCTCACTCAGCCGCGTCGGCGGAGCGGGACGG
TTGCGGATCATGGAGCGGACAGCGGGCAAGGAGCTCGCCCTGGCACCGCTGCAGGACTGGGGTG
AGGAGACAGAGGACGGCGCGGTATACAGTGTCTCTCTGCGGCGGCAGCGAAGTCAGCGTTTGAG
TCTGGGGGCAGGCCCAGGGGGCACCCAGACCTCCAGCCCCGCTGCTGATACCTTCCTCCATTAC
CGCACCAGCAAGGTGCGGGCACTGAGGGCGGCACGGCTGGAGCGGCTGGTGCGGGAGTTGGTGT
CTGGGGATCGAGAGCAGGACCCGGGCTTTGTGCCTGCCTTCCTGGCCACCCACCGGGCTTTTGT
GCCCACTGCCCGCGTTCTGGGCCTTCTCCTGCCACCACCGCCACCGCCCCTGCCATCAGGGGCT
GTGGTGTCGGTGCTGGGCTCCTGGCTGCGGGACCACCCTCAGGATTTCCAGGACCCCCCAGCCC
ACTCGGACCTAGGCAGTGTCTGCACCTTTCTGAGCTGGGCAGCCCCATCAGGGGCTGAGGCCCA
GGAGGCAGAAAAGCTGCTGGGAGATTTCCTGGAGGAGGCTGAGCAAGAGCAGGAAGAAGAGGAG
CAGTCCCAGCCATGGGGAGGATCCCTAGGGGCTGCCCAGATCCCCTGTCCAGACTCCCCAGCAG
GCTGCTTGGAAGAGGAGGAAAGACTCGTGAGGGAAGGCCCTGAGCTCCTGGACTTCAGTGTAGA
CGAGGTGGCCGAGCAGCTGACCCTGATGGATGTGGAGCTCTTCTCGCGCGTGCGACCCTGCGAG
TGCCTGGGCTCCGTGTGGTCGCAGCGAGACCGGCCGGGGGCCACAGGCACCGCCCCTACCGTGC
GCGCCACTGTGACCCAGTTCAACAGAGTGATCGGCTGCGTGCTGGGCTCGGTCCTTGGAGAGCC
GGGCCTGGCTGCCCCGCAGAGGGCGCAGCGGCTGGAGAAGTGGATCCGCATCGCCCAGCGCTGC
CGGGAACTGCGGAATTTCTCCTCCCTGCGTGCCATCCTGTCTGCTCTGCAGTCCAACCCCATCT
ACAGGCTCAAGCGCAGCTGGGGGGCAGTGAGCCGGGAACCGTTATCTACTTTCAGGAAACTTTC
GCAGATTTTCTCCGATGAAAACAACCACCTCAGCAGCAGAGAGATTCTTTCCCAGGACGAGGCC
ACCAAGGCATCCCAAGAGGAGGACACCCCCCCAGGAAGCCTGCTCTCAAAACTGCCCCCAGGGC
CTGTCCCCTACCTTGGCACCTTTCTCACGGACCTGGTTATGCTGGATACAGCCCTGCCGGACAT
ACTGGAGGGGGATCTCATCAACTTTGAGAAGAGGAGAAAGGAATGGGAGATCCTGGCCCGCATC
CAGCAGCTGCAGAGGCGCTGTCAGAGCTACTGCCTGAGCCCCCGCCTGCCTGTCCTGGCTGCCC
TGCGTGCTCAGTGCCAGCTCAGCGAGGAGCAGAGCTACCGCATCTCCCGTGTCATTGAGCCGCC
GGCTGCCTCTTGCCCCAGCTCCCCACGTGTCCGGCGGCGAATCAGCCTCACCAAGCGCCTCAGT
GCGAAGCTGTCCAGAGAGAGAGGCTCATCTCCTGGTGGGAGCCCTGGGGACCCCTCATTCTCCA
CCTCCAGTGTGTCCCCAAGATCCCCCCCATCCAGTCCTATAACCAGGGACCCTCCAGCTGGCAG
TCCTCCAGCCTCTCCAGGGCCCCAGGGCCCCAGCATCAAGCTGCCCCTGAGCCCCGACCTGCCA
GGCCCCCGGCCCCTGGCCTTGCCCTTGAGTGGTCCTCGCATCCCTCTCCCTGGGCAGCAGGGCT
CAGAGGCCCGAGTCATCCGCATCAGCATCAACAATGACCATGGGAATCTGTATCGGAGCATCTT
GCTCACTAGTCAGGACAAGGCCCCCAGCGTGGTGCAGCGAGCCTTGGAAAAGCACAATGTGGCC
CAGCCCTGGGCCCGTGACTACCAGCTCTTTCAAGTCCTTCCTGGGGACAGGGAACTCCTGATTC
CTGACAATGCCAATGTCTTCTACGCAATGAGCCCAGCCGCCCCTGGAGATTTTGTGCTGCGGCG
GAAGGAGATGGTCCGGCACACGACTTCAATCTCCTCTGCCTGAAGTGGCTCTCCTCATCTTCTA
GGACATGGCCCCATGGGCAGAAAGGGGCCTGGCTTCTATCACCAGGGGGTGGGGAGGAGGCTGT
TCCCTGGAAAGCTCCCCTTTCCCCATAGAGGCCATTGTGCTCCATAACCTATAACTGCCCCCAA
CCTCACTGAACCCCATCCTTCTGACCCTCTTGGCACCAGATCCCTATTCCAAAGACATCAGGCC
ATGGGGTGGCTGGTGGAGAACTCCATCCCATAAACATAGAAAGAGGCAGAGCATCGGGGGTCAG
ACTCTCCCCCAAAGAAATCTTGTAACTGTTGCAGACCTTTCAGAAGCAACAGAAGTGGATGAAA
ATAGTGACCAAAGTCATGAAACAGGA

hide sequence

RefSeq Acc Id:

XM_021083877 ⟹ XP_020939536

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	70,074,534 - 70,087,990 (-)	NCBI

Sequence:

show sequence

CTCACCCTGTCCCTCCAGAAAAATGGGAGATGCCTCCATACCTGGAGCAGACCAGCCCTCCCCA
TCTAAGGTCTCAAGTCTGTCCCCCACTTAGCTATACACACTCCCCCACACACCTAAGGACACAA
AAAAAGAGCCTGCCCCTAGGAGAGAGAGAGGGGCCTTTCTCCCGGTGCAGAATACACACCTATC
CGGAGAGCCCAGGCTTCTCCAGGGGCCTGGGCTGGGAGCTGGGGTCCCACAGGGATATCCGAGA
GCCCTGGGTCCACCCCGCTCCGCCCCCGCGCGGCCCGGCCGCCCCGCCCAGCCGGCCCAACGCC
CAGCCACTGCCCGCGACCCGCAGGCCCTTCCGCCTCACTCAGCCGCGTCGGCGGAGCGGGACGG
TTGCGGATCATGGAGCGGACAGCGGGCAAGGAGCTCGCCCTGGCACCGCTGCAGGACTGGGGTG
AGGAGACAGAGGACGGCGCGGTATACAGTGTCTCTCTGCGGCGGCAGCGAAGTCAGCGTTTGAG
TCTGGGGGCAGGCCCAGGGGGCACCCAGACCTCCAGCCCCGCTGCTGATACCTTCCTCCATTAC
CGCACCAGCAAGGTGCGGGCACTGAGGGCGGCACGGCTGGAGCGGCTGGTGCGGGAGTTGGTGT
CTGGGGATCGAGAGCAGGACCCGGGCTTTGTGCCTGCCTTCCTGGCCACCCACCGGGCTTTTGT
GCCCACTGCCCGCGTTCTGGGCCTTCTCCTGCCACCACCGCCACCGCCCCTGCCATCAGGGGTA
GAGCTCAAGAAGACAGAGGGAAGAGATCTGAGCTTGAACAAGAACTTGAGGGCTGTGGTGTCGG
TGCTGGGCTCCTGGCTGCGGGACCACCCTCAGGATTTCCAGGACCCCCCAGCCCACTCGGACCT
AGGCAGTGTCTGCACCTTTCTGAGCTGGGCAGCCCCATCAGGGGCTGAGGCCCAGGAGGCAGAA
AAGCTGCTGGGAGATTTCCTGGAGGAGGCTGAGCAAGAGCAGGAAGAAGAGGAGCAGTCCCAGC
CATGGGGAGGATCCCTAGGGGCTGCCCAGATCCCCTGTCCAGACTCCCCAGCAGGCTGCTTGGA
AGAGGAGGAAAGACTCGTGAGGGAAGGCCCTGAGCTCCTGGACTTCAGTGTAGACGAGGTGGCC
GAGCAGCTGACCCTGATGGATGTGGAGCTCTTCTCGCGCGTGCGACCCTGCGAGTGCCTGGGCT
CCGTGTGGTCGCAGCGAGACCGGCCGGGGGCCACAGGCACCGCCCCTACCGTGCGCGCCACTGT
GACCCAGTTCAACAGAGTGATCGGCTGCGTGCTGGGCTCGGTCCTTGGAGAGCCGGGCCTGGCT
GCCCCGCAGAGGGCGCAGCGGCTGGAGAAGTGGATCCGCATCGCCCAGCGCTGCCGGGAACTGC
GGAATTTCTCCTCCCTGCGTGCCATCCTGTCTGCTCTGCAGTCCAACCCCATCTACAGGCTCAA
GCGCAGCTGGGGGGCAGTGAGCCGGGAACCGTTATCTACTTTCAGGAAACTTTCGCAGATTTTC
TCCGATGAAAACAACCACCTCAGCAGCAGAGAGATTCTTTCCCAGGACGAGGCCACCAAGGCAT
CCCAAGAGGAGGACACCCCCCCAGGAAGCCTGCTCTCAAAACTGCCCCCAGGGCCTGTCCCCTA
CCTTGGCACCTTTCTCACGGACCTGGTTATGCTGGATACAGCCCTGCCGGACATACTGGAGGGG
GATCTCATCAACTTTGAGAAGAGGAGAAAGGAATGGGAGATCCTGGCCCGCATCCAGCAGCTGC
AGAGGCGCTGTCAGAGCTACTGCCTGAGCCCCCGCCTGCCTGTCCTGGCTGCCCTGCGTGCTCA
GTGCCAGCTCAGCGAGGAGCAGAGCTACCGCATCTCCCGTGTCATTGAGCCGCCGGCTGCCTCT
TGCCCCAGCTCCCCACGTGTCCGGCGGCGAATCAGCCTCACCAAGCGCCTCAGAAGCTGTCCAG
AGAGAGAGGCTCATCTCCTGGTGGGAGCCCTGGGGACCCCTCATTCTCCACCTCCAGCTGCCCC
TGAGCCCCGACCTGCCAGGCCCCCGGCCCCTGGCCTTGCCCTTGAGTGGTCCTCGCATCCCTCT
CCCTGGGCAGCAGGGCTCAGAGGCCCGAGTCATCCGCATCAGCATCAACAATGACCATGGGAAT
CTGTATCGGAGCATCTTGCTCACTAGTCAGGACAAGGCCCCCAGCGTGGTGCAGCGAGCCTTGG
AAAAGCACAATGTGGCCCAGCCCTGGGCCCGTGACTACCAGCTCTTTCAAGTCCTTCCTGGGGA
CAGGG

hide sequence

Protein Sequences


Protein RefSeqs	XP_020939534	(Get FASTA)	NCBI Sequence Viewer
	XP_020939535	(Get FASTA)	NCBI Sequence Viewer
	XP_020939536	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000014479
	ENSSSCP00000014479.5
	ENSSSCP00000076746.1
	ENSSSCP00005045320.1
	ENSSSCP00015046007.1
	ENSSSCP00025011813.1
	ENSSSCP00030012857.1
	ENSSSCP00035037509.1
	ENSSSCP00040002692.1
	ENSSSCP00045039635.1
	ENSSSCP00050023684.1
	ENSSSCP00055047102.1
	ENSSSCP00060018847.1
	ENSSSCP00065031729.1
	ENSSSCP00070042196.1

RefSeq Acc Id:	XP_020939535 ⟸ XM_021083876
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1VJT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERTAGKELALAPLQDWGEETEDGAVYSVSLRRQRSQRLSLGAGPGGTQTSSPAADTFLHYRTS KVRALRAARLERLVRELVSGDREQDPGFVPAFLATHRAFVPTARVLGLLLPPPPPPLPSGAVVS VLGSWLRDHPQDFQDPPAHSDLGSVCTFLSWAAPSGAEAQEAEKLLGDFLEEAEQEQEEEEQSQ PWGGSLGAAQIPCPDSPAGCLEEEERLVREGPELLDFSVDEVAEQLTLMDVELFSRVRPCECLG SVWSQRDRPGATGTAPTVRATVTQFNRVIGCVLGSVLGEPGLAAPQRAQRLEKWIRIAQRCREL RNFSSLRAILSALQSNPIYRLKRSWGAVSREPLSTFRKLSQIFSDENNHLSSREILSQDEATKA SQEEDTPPGSLLSKLPPGPVPYLGTFLTDLVMLDTALPDILEGDLINFEKRRKEWEILARIQQL QRRCQSYCLSPRLPVLAALRAQCQLSEEQSYRISRVIEPPAASCPSSPRVRRRISLTKRLSAKL SRERGSSPGGSPGDPSFSTSSVSPRSPPSSPITRDPPAGSPPASPGPQGPSIKLPLSPDLPGPR PLALPLSGPRIPLPGQQGSEARVIRISINNDHGNLYRSILLTSQDKAPSVVQRALEKHNVAQPW ARDYQLFQVLPGDRELLIPDNANVFYAMSPAAPGDFVLRRKEMVRHTTSISSA hide sequence

RefSeq Acc Id:	XP_020939534 ⟸ XM_021083875
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1V3L2 (UniProtKB/TrEMBL), F1S598 (UniProtKB/TrEMBL), A0A8D0QA67 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERTAGKELALAPLQDWGEETEDGAVYSVSLRRQRSQRLSLGAGPGGTQTSSPAADTFLHYRTS KVRALRAARLERLVRELVSGDREQDPGFVPAFLATHRAFVPTARVLGLLLPPPPPPLPSGVELK KTEGRDLSLNKNLRAVVSVLGSWLRDHPQDFQDPPAHSDLGSVCTFLSWAAPSGAEAQEAEKLL GDFLEEAEQEQEEEEQSQPWGGSLGAAQIPCPDSPAGCLEEEERLVREGPELLDFSVDEVAEQL TLMDVELFSRVRPCECLGSVWSQRDRPGATGTAPTVRATVTQFNRVIGCVLGSVLGEPGLAAPQ RAQRLEKWIRIAQRCRELRNFSSLRAILSALQSNPIYRLKRSWGAVSREPLSTFRKLSQIFSDE NNHLSSREILSQDEATKASQEEDTPPGSLLSKLPPGPVPYLGTFLTDLVMLDTALPDILEGDLI NFEKRRKEWEILARIQQLQRRCQSYCLSPRLPVLAALRAQCQLSEEQSYRISRVIEPPAASCPS SPRVRRRISLTKRLSAKLSRERGSSPGGSPGDPSFSTSSVSPRSPPSSPITRDPPAGSPPASPG PQGPSIKLPLSPDLPGPRPLALPLSGPRIPLPGQQGSEARVIRISINNDHGNLYRSILLTSQDK APSVVQRALEKHNVAQPWARDYQLFQVLPGDRELLIPDNANVFYAMSPAAPGDFVLRRKEMVRH TTSISSA hide sequence

RefSeq Acc Id:	XP_020939536 ⟸ XM_021083877
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D0QA67 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERTAGKELALAPLQDWGEETEDGAVYSVSLRRQRSQRLSLGAGPGGTQTSSPAADTFLHYRTS KVRALRAARLERLVRELVSGDREQDPGFVPAFLATHRAFVPTARVLGLLLPPPPPPLPSGVELK KTEGRDLSLNKNLRAVVSVLGSWLRDHPQDFQDPPAHSDLGSVCTFLSWAAPSGAEAQEAEKLL GDFLEEAEQEQEEEEQSQPWGGSLGAAQIPCPDSPAGCLEEEERLVREGPELLDFSVDEVAEQL TLMDVELFSRVRPCECLGSVWSQRDRPGATGTAPTVRATVTQFNRVIGCVLGSVLGEPGLAAPQ RAQRLEKWIRIAQRCRELRNFSSLRAILSALQSNPIYRLKRSWGAVSREPLSTFRKLSQIFSDE NNHLSSREILSQDEATKASQEEDTPPGSLLSKLPPGPVPYLGTFLTDLVMLDTALPDILEGDLI NFEKRRKEWEILARIQQLQRRCQSYCLSPRLPVLAALRAQCQLSEEQSYRISRVIEPPAASCPS SPRVRRRISLTKRLRSCPEREAHLLVGALGTPHSPPPAAPEPRPARPPAPGLALEWSSHPSPWA AGLRGPSHPHQHQQ hide sequence

RefSeq Acc Id:

ENSSSCP00000071347 ⟸ ENSSSCT00000078239

RefSeq Acc Id:

ENSSSCP00000076746 ⟸ ENSSSCT00000100680

RefSeq Acc Id:

ENSSSCP00000014479 ⟸ ENSSSCT00000014880

Protein Domains

N-terminal Ras-GEF Ras-associating Ras-GEF

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013625	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00000043957	Ensembl, UniProtKB/TrEMBL
	ENSSSCG00005044890	UniProtKB/TrEMBL
	ENSSSCG00015079850	UniProtKB/TrEMBL
	ENSSSCG00025020515	UniProtKB/TrEMBL
	ENSSSCG00030020769	UniProtKB/TrEMBL
	ENSSSCG00035066555	UniProtKB/TrEMBL
	ENSSSCG00040005066	UniProtKB/TrEMBL
	ENSSSCG00045033141	UniProtKB/TrEMBL
	ENSSSCG00050041123	UniProtKB/TrEMBL
	ENSSSCG00055029591	UniProtKB/TrEMBL
	ENSSSCG00060032616	UniProtKB/TrEMBL
	ENSSSCG00065053109	UniProtKB/TrEMBL
	ENSSSCG00070024998	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000014880	ENTREZGENE
	ENSSSCT00000014880.5	UniProtKB/TrEMBL
	ENSSSCT00000100680.1	UniProtKB/TrEMBL
	ENSSSCT00005072472.1	UniProtKB/TrEMBL
	ENSSSCT00015108484.1	UniProtKB/TrEMBL
	ENSSSCT00025027900.1	UniProtKB/TrEMBL
	ENSSSCT00030028750.1	UniProtKB/TrEMBL
	ENSSSCT00035089682.1	UniProtKB/TrEMBL
	ENSSSCT00040006738.1	UniProtKB/TrEMBL
	ENSSSCT00045056735.1	UniProtKB/TrEMBL
	ENSSSCT00050055765.1	UniProtKB/TrEMBL
	ENSSSCT00055058819.1	UniProtKB/TrEMBL
	ENSSSCT00060044189.1	UniProtKB/TrEMBL
	ENSSSCT00065072810.1	UniProtKB/TrEMBL
	ENSSSCT00070049958.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.840.10	UniProtKB/TrEMBL
	Son of sevenless (SoS) protein Chain: S domain 1	UniProtKB/TrEMBL
InterPro	ODAD3	UniProtKB/TrEMBL
	RA_dom	UniProtKB/TrEMBL
	Ras-like_GEF	UniProtKB/TrEMBL
	Ras-like_Gua-exchang_fac_N	UniProtKB/TrEMBL
	Ras_G-nucl-exch_fac_CS	UniProtKB/TrEMBL
	Ras_GEF_dom_sf	UniProtKB/TrEMBL
	RASGEF_cat_dom	UniProtKB/TrEMBL
	RASGEF_cat_dom_sf	UniProtKB/TrEMBL
	RGL3	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
NCBI Gene	RGL3	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 151	UniProtKB/TrEMBL
	OUTER DYNEIN ARM-DOCKING COMPLEX SUBUNIT 3	UniProtKB/TrEMBL
	PTHR23113	UniProtKB/TrEMBL
	PTHR23113:SF220	UniProtKB/TrEMBL
Pfam	PF00788	UniProtKB/TrEMBL
	RasGEF	UniProtKB/TrEMBL
	RasGEF_N	UniProtKB/TrEMBL
PROSITE	PS50200	UniProtKB/TrEMBL
	RASGEF	UniProtKB/TrEMBL
	RASGEF_CAT	UniProtKB/TrEMBL
	RASGEF_NTER	UniProtKB/TrEMBL
SMART	RasGEF	UniProtKB/TrEMBL
	RasGEFN	UniProtKB/TrEMBL
	SM00314	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48366	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A4X1VJT7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VK59_PIG	UniProtKB/TrEMBL
	A0A8D0QA67	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1V3L2	ENTREZGENE, UniProtKB/TrEMBL
	F1S598	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A8W4FBH4	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-09-26	ODAD3	outer dynein arm docking complex subunit 3	RGL3	ral guanine nucleotide dissociation stimulator like 3	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar