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Gene: FHL5 (four and a half LIM domains 5) Sus scrofa

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Symbol:

FHL5

Name:

four and a half LIM domains 5

RGD ID:

14246039

Description:

ENCODES a protein that exhibits metal ion binding (inferred); transcription coactivator activity (inferred); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

four and a half LIM domains protein 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	63,705,936 - 63,754,067 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	63,705,864 - 63,754,079 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	72,074,158 - 72,120,937 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

migraine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

Cellular Component

nucleus (IBA,IEA)

Z disc (IBA)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

transcription coactivator activity (IBA,IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:17407547	PMID:30032202

Genomics

Comparative Map Data

FHL5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	63,705,936 - 63,754,067 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	63,705,864 - 63,754,079 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	72,074,158 - 72,120,937 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FHL5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	96,562,574 - 96,618,626 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	96,562,548 - 96,618,626 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	97,010,450 - 97,066,502 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	97,117,156 - 97,171,233 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	97,117,155 - 97,171,233	NCBI
Celera	6	97,652,191 - 97,706,601 (+)	NCBI		Celera
Cytogenetic Map	6	q16.1	NCBI
HuRef	6	94,444,613 - 94,498,689 (+)	NCBI		HuRef
CHM1_1	6	97,272,425 - 97,326,515 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	97,734,473 - 97,790,488 (+)	NCBI		T2T-CHM13v2.0

Fhl5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	25,199,907 - 25,242,852 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	25,199,908 - 25,242,876 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	25,199,907 - 25,242,852 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	25,199,908 - 25,242,876 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	25,127,056 - 25,170,023 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	25,290,539 - 25,333,506 (-)	NCBI		MGSCv36	mm8
Celera	4	24,935,116 - 24,977,805 (-)	NCBI		Celera
Cytogenetic Map	4	A3	NCBI
cM Map	4	10.58	NCBI

Fhl5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	43,704,493 - 43,753,356 (-)	NCBI		GRCr8
mRatBN7.2	5	38,907,941 - 38,956,759 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	38,907,946 - 38,956,552 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	41,005,013 - 41,053,550 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	42,604,019 - 42,652,566 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	42,537,365 - 42,585,904 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	39,564,241 - 39,611,273 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	39,564,242 - 39,611,053 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	44,191,766 - 44,239,094 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	40,253,199 - 40,301,542 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	40,253,378 - 40,301,721 (-)	NCBI
Celera	5	37,834,932 - 37,882,495 (-)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

Fhl5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955411	22,583,292 - 22,619,281 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955411	22,583,314 - 22,619,281 (+)	NCBI	ChiLan1.0	ChiLan1.0

FHL5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	116,602,744 - 116,663,641 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	114,480,915 - 114,541,811 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	94,397,172 - 94,450,318 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	98,283,399 - 98,337,256 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	98,283,399 - 98,337,256 (+)	Ensembl	panpan1.1		panPan2

FHL5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	55,027,765 - 55,074,717 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	55,027,784 - 55,071,570 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	54,841,502 - 54,888,010 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	55,844,813 - 55,891,117 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	55,844,858 - 55,887,960 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	55,180,133 - 55,226,376 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	55,041,040 - 55,087,562 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	55,289,016 - 55,335,600 (+)	NCBI		UU_Cfam_GSD_1.0

Fhl5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	89,602,418 - 89,642,732 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936699	1,084,550 - 1,124,676 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936699	1,084,578 - 1,124,783 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FHL5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	77,298,280 - 77,351,797 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	77,298,353 - 77,350,157 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	49,594,298 - 49,645,391 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fhl5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624810	8,747,613 - 8,792,532 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624810	8,747,834 - 8,792,527 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in FHL5
1315 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	5	14	12	23	3	6	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001243314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021084440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021084477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK345676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EW552710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000004796 ⟹ ENSSSCP00000004683

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	63,705,937 - 63,754,067 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000068060 ⟹ ENSSSCP00000063765

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	63,705,936 - 63,751,989 (+)	Ensembl

RefSeq Acc Id:

NM_001243314 ⟹ NP_001230243

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	63,706,018 - 63,752,163 (+)	NCBI

Sequence:

show sequence

ATGTGTTGGAAGGGAAAATAAATCATCATATATTCCCCTTTCATACTGTTTAAATAACTGGAAG
AAGGAGCTTTAAGAAAAAGACAAAAACCAAAATGACGACTGCTCAATTTGATTGTCAATACTGC
ACGGCATCACTTCTTGGGAAGAAGTATGTACTAAAGGATGACAATCCATACTGTGTTTCTTGTT
ATGATCGCATCTTTTCTAACTATTGTGAGGAGTGCAAAGAACCAATTGAATCAGATTCCAAGGA
TCTTTGTTACAAAGGCCGTCACTGGCATGAAGGATGCTTCAATTGTGCCAAATGCAATCACTCC
TTGGTGGAAAAACCTTTTGCTGCCAAGGATGAGCGCCTGCTGTGCTCAGAATGCTATTCTAATG
AGTGCTCCTCCAAGTGCTTCCACTGCAAGAGGACCATCATGCCAGGTTCCCGCAAAATGGAATT
TAAGGGAAACTACTGGCACGAAACCTGCTTTGTGTGTGAGCACTGCCGACAACCAATAGGAACT
AAACCATTGATTTCCAAAGAGAATGGCAATTATTGTGTGCCCTGTTTTGAGAAGGAGTTTGCTC
ACTACTGCAGCTTTTGTAAGAAGGTGATAACTTCAGGTGGGATAACATTTCATGACCAGCCATG
GCATAAAGAGTGTTTTCTGTGCAGTGGCTGTAGGAAGGAGCTCTGTGAAGAAGAGTTTATGTCC
AAAGATGATTATCCATTCTGCTTGGACTGCTACAACCATCTTTATGCCAAAAAGTGCTCTGCCT
GCACCAAACCTATTACTGGTCTCAGAGGCGCCAAGTTTATCTGCTTTCAAGACCGCCAGTGGCA
CAGTGAGTGCTTTAACTGCGGGAAGTGCTCTGTGTCTTTGGTGGGGGAAGGCTTCCTGACCCAG
AACAAGGAAATCTTCTGCCGCAAATGTGGCTCCGGGGTGGACGCTGACAACTAGAAGGAGACAG
TCCTTTCCCACTGAAATATCCACCTTGCTTTTGTTCTCACTAAATCCAGAGCTCGAATGATATC
ATGTTTCTGACTTAATTTTTAGAACAAATTAATGTAGAGTTTATAGCGGAAGAGTTTTGCACAC
ATTCTGATTGAAATATAAGAACTAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_021084440 ⟹ XP_020940099

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	63,705,864 - 63,754,079 (+)	NCBI

Sequence:

show sequence

AGAAGTGCTTGGAGTCAGCTATGTGCACGTCATAAGACTTGGAGGAAATCCACACACCCTCCTA
TTTTCTTCCACTATGTTAAAGAAAAGCTGAAGGGAGGGACCCTCAGATAGTTTTGGTGGCCTAT
TCTGTTCACTTGGAGTTGACATACGGATGTGTTGGAAGGGAAAATAAATCATCATATATTCCCC
TTTCATACTGTTTAAATAACTGGAAGAAGGAGCTTTAAGAAAAAGAAATGAAGTTTCTTCTCAA
TTCATATGCATGTTATTACAAATATCTGAGAGGTTTAAATTCAAGTGCTTGCCACAATACAGAT
TCCAGTACTATATTCCATCAGCATTTAAATATGCTCAAATTTCCCATCTGGAAAAGCTTCTCCT
TCATTACTGAGATCCACAAGTTACCCTCATATCTCAGCTTTGTAAGTTCATCTCATGAAGGTAC
TATCTACACTCTGGACAAAAACCAAAATGACGACTGCTCAATTTGATTGTCAATACTGCACGGC
ATCACTTCTTGGGAAGAAGTATGTACTAAAGGATGACAATCCATACTGTGTTTCTTGTTATGAT
CGCATCTTTTCTAACTATTGTGAGGAGTGCAAAGAACCAATTGAATCAGATTCCAAGGATCTTT
GTTACAAAGGCCGTCACTGGCATGAAGGATGCTTCAATTGTGCCAAATGCAATCACTCCTTGGT
GGAAAAACCTTTTGCTGCCAAGGATGAGCGCCTGCTGTGCTCAGAATGCTATTCTAATGAGTGC
TCCTCCAAGTGCTTCCACTGCAAGAGGACCATCATGCCAGGTTCCCGCAAAATGGAATTTAAGG
GAAACTACTGGCACGAAACCTGCTTTGTGTGTGAGCACTGCCGACAACCAATAGGAACTAAACC
ATTGATTTCCAAAGAGAATGGCAATTATTGTGTGCCCTGTTTTGAGAAGGAGTTTGCTCACTAC
TGCAGCTTTTGTAAGAAGGTGATAACTTCAGGTGGGATAACATTTCATGACCAGCCATGGCATA
AAGAGTGTTTTCTGTGCAGTGGCTGTAGGAAGGAGCTCTGTGAAGAAGAGTTTATGTCCAAAGA
TGATTATCCATTCTGCTTGGACTGCTACAACCATCTTTATGCCAAAAAGTGCTCTGCCTGCACC
AAACCTATTACTGGTCTCAGAGGCGCCAAGTTTATCTGCTTTCAAGACCGCCAGTGGCACAGTG
AGTGCTTTAACTGCGGGAAGTGCTCTGTGTCTTTGGTGGGGGAAGGCTTCCTGACCCAGAACAA
GGAAATCTTCTGCCGCAAATGTGGCTCCGGGGTGGACGCTGACAACTAGAAGGAGACAGTCCTT
TCCCACTGAAATATCCACCTTGCTTTTGTTCTCACTAAATCCAGAGCTCGAATGATATCATGTT
TCTGACTTAATTTTTAGAACAAATTAATGTAGAGTTTATAGCGGAAGAGTTTTTGCACACATTC
TGATTGAAATATAAGAACTAAAAAAAAAAAAAAAGCAGTCTAACAGAAATGAATCTATACTGAA
TCACAAAGGCACCTTTCCTTGCAAAATGCTGCACTCTGCTGTTAGAAATACAGGAACATATCTC
TTTATTATAATCCAGTGTATGACCCATACCTAGAAGTCATGGCTATTATTACTGAAGACTGCTG
TGTCCCAAAACTGCAGAGTAGAGAGGAAACAAAGAGATCAAATTGAAGGCATACATGACTCATG
TTTGCATTCCTAACGAGCTAGTTATAAACACAATGTGATTGGCTATGAATGGTAGAACAAAAAT
GATCCAGGAAAATAGATTAGTAATCACCACATTTAAGTATTCTGTCATTTTATCATTCTTTAAT
TGTTCATGTGTACTGACTTTGGAGTTGAAAAACAAAGCTACAATTTGCCCTCATCTACCTGCTC
CCACAGCTAGTTCGTTATCGTATTTAATCAATGGAATCTGGGATTTCTGGACACTGACTCTCAT
TCTCTGCATAGAGATAAACGGGTCCTTTCTATGTGGGGAGGTTAAAAGCATAGGTTTCAACACA
TTTTGTCTTAAATGCATTTTCAAAGCCCACAATGATTTTTTCTAAATACTTAATGATTCCATGA
AAGAAAAATCTATTCTTTCAAATGAACTAACCAGGATAATCACTGTCCCCAAAGGCAAACCTTT
AAGGTAAATAGATCATTAAATCATCACTTGTGGAAATGAGTTTTAGGGAAGGAATTGGTGTTGG
AACCTGACTTTCATCCAGATATCTAAAAGCGTGACAGAATGCATAATTAGCTTGGAGCCTCATG
CATTTTGCCTTCCAAAATTATATAGATTATTAATAGGAAGACATAAAAGTGGGCTATAAAGAAA
TCTAGTAATAAGAACTGAGAAAGAATAATCCACTGCTGATTGTTGTGGACCTGCAAAGCAGCAC
AACAGAGCAATGTGGTCTGTAGATGAGCCCCCCTCACTGTTCTTCCACATGCATACCATCCACC
TCATCTATGCCAACCATATCCCCTCGCTTCAGACTCTTGCAGGACTGTGAGAGATACACTCAAC
CCTCAGTATCCATTCTACAAATAAGCCAGTGATTCTTGGTCACAGCCTTAGTGAAAAGCCTATC
ATCACATGTGTCTCTTTATACCAAACACCCCTTGATCATGACCCTACCCAGCTGCCCCTGGATA
AAATTTTCCATATCATGTGGGACAAATGGAAAGCAACCTCTGATCTCCATGCTCAGTTATCACC
CTTGGTTATAGTGTCACTTGGGTGGAGCAGAGAGAGGTCGGGGGAGAAAACTGCATTGACATAA
CATTTTTCTAAGTGTCTAATCTCAAATTATTGCACAGCATTAAAGTTGTGACTGAAATCTAATT
ATGTGCTCTGGCTGATTACAATGATTAAAATAGCATCACAGGAGATTCAATTAAAATTGTTATG
GAAACAATTTTGGAAATAGTTTAAAATGCAAGGGCATTTGGAAATGCTAGCAATTTAGAGACAC
TAATGAAAAGTCAGGCTACACAGGCTATTTGAAAGATATCATTGTCTCTTTTTTGTATTAACAA
TTCCAAGATATTTTCTCATCTTCACATTGTTAAACGTAGGCAAATATATCAATATTTTTCCTGC
ATTGTTTGAAATTGCGCATGTGGAACTGAATGTGCCAATTATCTAGAAAATAACAGTGTATTAC
GTAGAAAACCAAGCCATTATGAATCTGGATAGATATACAACATTTAAAACTGGCTCCATTAATC
AATTATAAGCAAACATACAAAATGGAATGGTCTTTCTTGGTTAAACAATTGGTCATGTTTATTT
ATTTTGCTGTGTGGGGTTGGGGGAATGTGAGTAGGCATATGATCAGGCTTGTGTTTGATCTTTA
CAATAAAATTCACAGAACACTTCTAAGAAA

hide sequence

RefSeq Acc Id:

XM_021084477 ⟹ XP_020940136

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	63,705,864 - 63,754,079 (+)	NCBI

Sequence:

show sequence

AGAAGTGCTTGGAGTCAGCTATGTGCACGTCATAAGACTTGGAGGAAATCCACACACCCTCCTA
TTTTCTTCCACTATGTTAAAGAAAAGCTGAAGGGAGGGACCCTCAGATAGTTTTGGTGGCCTAT
TCTGTTCACTTGGAGTTGACATACGGATGTGTTGGAAGGGAAAATAAATCATCATATATTCCCC
TTTCATACTGTTTAAATAACTGGAAGAAGGAGCTTTAAGAAAAAAACAAACTAACCAGATGGAA
AGCTCTCGTCAGCTGTTTTGCTTCATGGGAGAGTAGCTCACCAGCTCTCAGGAGAATTCCTATC
TGACCTCTCTACACAAGACATTCAGCTTCCAACAAACTGGGCTTGTGAATATGTCCCTCGAGAC
TAATATCAAACATTCCACCACAAGACTATGATGCTTGTTTTAGGTTATTTTTGATTGATGGCCT
GAAGTTATGGCTTTAGTTATTTTTAAAATTGTTTGTTGAGTTTTAAAAAGTAGTGTTTGAGGGA
TCAAGAAAATAGCCTCCTTCTTCAAAGTGGGAACTACAGTTATAATTTTACTTTTTCCATCAAG
TCAAGTACACCTACAGTCCTGACTTTTTCACTCTAATCTCACTTGATCCTTGAGTGGGAGCATA
AGAAGCTGATAATGTTCTCATTTCATACTTGAGGAAAGTAAGTGCCGGAATGGTTAAATGATTT
CTATAACAATGGGACAAAAACCAAAATGACGACTGCTCAATTTGATTGTCAATACTGCACGGCA
TCACTTCTTGGGAAGAAGTATGTACTAAAGGATGACAATCCATACTGTGTTTCTTGTTATGATC
GCATCTTTTCTAACTATTGTGAGGAGTGCAAAGAACCAATTGAATCAGATTCCAAGGATCTTTG
TTACAAAGGCCGTCACTGGCATGAAGGATGCTTCAATTGTGCCAAATGCAATCACTCCTTGGTG
GAAAAACCTTTTGCTGCCAAGGATGAGCGCCTGCTGTGCTCAGAATGCTATTCTAATGAGTGCT
CCTCCAAGTGCTTCCACTGCAAGAGGACCATCATGCCAGGTTCCCGCAAAATGGAATTTAAGGG
AAACTACTGGCACGAAACCTGCTTTGTGTGTGAGCACTGCCGACAACCAATAGGAACTAAACCA
TTGATTTCCAAAGAGAATGGCAATTATTGTGTGCCCTGTTTTGAGAAGGAGTTTGCTCACTACT
GCAGCTTTTGTAAGAAGGTGATAACTTCAGGTGGGATAACATTTCATGACCAGCCATGGCATAA
AGAGTGTTTTCTGTGCAGTGGCTGTAGGAAGGAGCTCTGTGAAGAAGAGTTTATGTCCAAAGAT
GATTATCCATTCTGCTTGGACTGCTACAACCATCTTTATGCCAAAAAGTGCTCTGCCTGCACCA
AACCTATTACTGGTCTCAGAGGCGCCAAGTTTATCTGCTTTCAAGACCGCCAGTGGCACAGTGA
GTGCTTTAACTGCGGGAAGTGCTCTGTGTCTTTGGTGGGGGAAGGCTTCCTGACCCAGAACAAG
GAAATCTTCTGCCGCAAATGTGGCTCCGGGGTGGACGCTGACAACTAGAAGGAGACAGTCCTTT
CCCACTGAAATATCCACCTTGCTTTTGTTCTCACTAAATCCAGAGCTCGAATGATATCATGTTT
CTGACTTAATTTTTAGAACAAATTAATGTAGAGTTTATAGCGGAAGAGTTTTTGCACACATTCT
GATTGAAATATAAGAACTAAAAAAAAAAAAAAAGCAGTCTAACAGAAATGAATCTATACTGAAT
CACAAAGGCACCTTTCCTTGCAAAATGCTGCACTCTGCTGTTAGAAATACAGGAACATATCTCT
TTATTATAATCCAGTGTATGACCCATACCTAGAAGTCATGGCTATTATTACTGAAGACTGCTGT
GTCCCAAAACTGCAGAGTAGAGAGGAAACAAAGAGATCAAATTGAAGGCATACATGACTCATGT
TTGCATTCCTAACGAGCTAGTTATAAACACAATGTGATTGGCTATGAATGGTAGAACAAAAATG
ATCCAGGAAAATAGATTAGTAATCACCACATTTAAGTATTCTGTCATTTTATCATTCTTTAATT
GTTCATGTGTACTGACTTTGGAGTTGAAAAACAAAGCTACAATTTGCCCTCATCTACCTGCTCC
CACAGCTAGTTCGTTATCGTATTTAATCAATGGAATCTGGGATTTCTGGACACTGACTCTCATT
CTCTGCATAGAGATAAACGGGTCCTTTCTATGTGGGGAGGTTAAAAGCATAGGTTTCAACACAT
TTTGTCTTAAATGCATTTTCAAAGCCCACAATGATTTTTTCTAAATACTTAATGATTCCATGAA
AGAAAAATCTATTCTTTCAAATGAACTAACCAGGATAATCACTGTCCCCAAAGGCAAACCTTTA
AGGTAAATAGATCATTAAATCATCACTTGTGGAAATGAGTTTTAGGGAAGGAATTGGTGTTGGA
ACCTGACTTTCATCCAGATATCTAAAAGCGTGACAGAATGCATAATTAGCTTGGAGCCTCATGC
ATTTTGCCTTCCAAAATTATATAGATTATTAATAGGAAGACATAAAAGTGGGCTATAAAGAAAT
CTAGTAATAAGAACTGAGAAAGAATAATCCACTGCTGATTGTTGTGGACCTGCAAAGCAGCACA
ACAGAGCAATGTGGTCTGTAGATGAGCCCCCCTCACTGTTCTTCCACATGCATACCATCCACCT
CATCTATGCCAACCATATCCCCTCGCTTCAGACTCTTGCAGGACTGTGAGAGATACACTCAACC
CTCAGTATCCATTCTACAAATAAGCCAGTGATTCTTGGTCACAGCCTTAGTGAAAAGCCTATCA
TCACATGTGTCTCTTTATACCAAACACCCCTTGATCATGACCCTACCCAGCTGCCCCTGGATAA
AATTTTCCATATCATGTGGGACAAATGGAAAGCAACCTCTGATCTCCATGCTCAGTTATCACCC
TTGGTTATAGTGTCACTTGGGTGGAGCAGAGAGAGGTCGGGGGAGAAAACTGCATTGACATAAC
ATTTTTCTAAGTGTCTAATCTCAAATTATTGCACAGCATTAAAGTTGTGACTGAAATCTAATTA
TGTGCTCTGGCTGATTACAATGATTAAAATAGCATCACAGGAGATTCAATTAAAATTGTTATGG
AAACAATTTTGGAAATAGTTTAAAATGCAAGGGCATTTGGAAATGCTAGCAATTTAGAGACACT
AATGAAAAGTCAGGCTACACAGGCTATTTGAAAGATATCATTGTCTCTTTTTTGTATTAACAAT
TCCAAGATATTTTCTCATCTTCACATTGTTAAACGTAGGCAAATATATCAATATTTTTCCTGCA
TTGTTTGAAATTGCGCATGTGGAACTGAATGTGCCAATTATCTAGAAAATAACAGTGTATTACG
TAGAAAACCAAGCCATTATGAATCTGGATAGATATACAACATTTAAAACTGGCTCCATTAATCA
ATTATAAGCAAACATACAAAATGGAATGGTCTTTCTTGGTTAAACAATTGGTCATGTTTATTTA
TTTTGCTGTGTGGGGTTGGGGGAATGTGAGTAGGCATATGATCAGGCTTGTGTTTGATCTTTAC
AATAAAATTCACAGAACACTTCTAAGAAA

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Protein Sequences


Protein RefSeqs	NP_001230243	(Get FASTA)	NCBI Sequence Viewer
	XP_020940099	(Get FASTA)	NCBI Sequence Viewer
	XP_020940136	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000004683
	ENSSSCP00000004683.2
	ENSSSCP00000063765
	ENSSSCP00000063765.1
	ENSSSCP00015029820.1
	ENSSSCP00015029850.1
	ENSSSCP00025044292.1
	ENSSSCP00030037303.1
	ENSSSCP00035027657.1
	ENSSSCP00035027659.1
	ENSSSCP00040028708.1
	ENSSSCP00045028684.1
	ENSSSCP00050008729.1
	ENSSSCP00055007957.1
	ENSSSCP00060043300.1
	ENSSSCP00065046862.1
	ENSSSCP00065046867.1
	ENSSSCP00070041141.1
	ENSSSCP00070041144.1

RefSeq Acc Id:	XP_020940099 ⟸ XM_021084440
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1VJU8 (UniProtKB/TrEMBL), A0A5G2QZT7 (UniProtKB/TrEMBL), A0A8D1A3S2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVLSTLWTKTKMTTAQFDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDS KDLCYKGRHWHEGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKM EFKGNYWHETCFVCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQ PWHKECFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPITGLRGAKFICFQDRQ WHSECFNCGKCSVSLVGEGFLTQNKEIFCRKCGSGVDADN hide sequence

RefSeq Acc Id:	XP_020940136 ⟸ XM_021084477
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1VD49 (UniProtKB/TrEMBL), F1RY03 (UniProtKB/TrEMBL), A0A5G2QZT7 (UniProtKB/TrEMBL), A0A8D1A3S2 (UniProtKB/TrEMBL), A0A8D1WR61 (UniProtKB/TrEMBL), A0A8D1A6S7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTAQFDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHWHE GCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCF VCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQPWHKECFLCSGC RKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPITGLRGAKFICFQDRQWHSECFNCGKCS VSLVGEGFLTQNKEIFCRKCGSGVDADN hide sequence

RefSeq Acc Id:

NP_001230243 ⟸ NM_001243314

- UniProtKB:

F1RY03 (UniProtKB/TrEMBL), A0A4X1VD49 (UniProtKB/TrEMBL), A0A5G2QZT7 (UniProtKB/TrEMBL), A0A8D1A3S2 (UniProtKB/TrEMBL), A0A8D1WR61 (UniProtKB/TrEMBL), A0A8D1A6S7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTTAQFDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHWHE
GCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCF
VCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQPWHKECFLCSGC
RKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPITGLRGAKFICFQDRQWHSECFNCGKCS
VSLVGEGFLTQNKEIFCRKCGSGVDADN

hide sequence

Ensembl Acc Id:

ENSSSCP00000063765 ⟸ ENSSSCT00000068060

Ensembl Acc Id:

ENSSSCP00000004683 ⟸ ENSSSCT00000004796

Protein Domains

LIM zinc-binding

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000004340	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015055743	UniProtKB/TrEMBL
	ENSSSCG00025072954	UniProtKB/TrEMBL
	ENSSSCG00030058302	UniProtKB/TrEMBL
	ENSSSCG00035051271	UniProtKB/TrEMBL
	ENSSSCG00040050070	UniProtKB/TrEMBL
	ENSSSCG00045024244	UniProtKB/TrEMBL
	ENSSSCG00050015404	UniProtKB/TrEMBL
	ENSSSCG00055005148	UniProtKB/TrEMBL
	ENSSSCG00060073037	UniProtKB/TrEMBL
	ENSSSCG00065076458	UniProtKB/TrEMBL
	ENSSSCG00070024393	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000004796	ENTREZGENE
	ENSSSCT00000004796.4	UniProtKB/TrEMBL
	ENSSSCT00000068060	ENTREZGENE
	ENSSSCT00000068060.1	UniProtKB/TrEMBL
	ENSSSCT00015074309.1	UniProtKB/TrEMBL
	ENSSSCT00015074399.1	UniProtKB/TrEMBL
	ENSSSCT00025100358.1	UniProtKB/TrEMBL
	ENSSSCT00030081329.1	UniProtKB/TrEMBL
	ENSSSCT00035068288.1	UniProtKB/TrEMBL
	ENSSSCT00035068292.1	UniProtKB/TrEMBL
	ENSSSCT00040067560.1	UniProtKB/TrEMBL
	ENSSSCT00045041327.1	UniProtKB/TrEMBL
	ENSSSCT00050020871.1	UniProtKB/TrEMBL
	ENSSSCT00055010064.1	UniProtKB/TrEMBL
	ENSSSCT00060099810.1	UniProtKB/TrEMBL
	ENSSSCT00065105593.1	UniProtKB/TrEMBL
	ENSSSCT00065105598.1	UniProtKB/TrEMBL
	ENSSSCT00070048723.1	UniProtKB/TrEMBL
	ENSSSCT00070048726.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine Rich Protein	UniProtKB/TrEMBL
InterPro	FHL5_LIM2	UniProtKB/TrEMBL
	Znf_LIM	UniProtKB/TrEMBL
KEGG Report	ssc:100152075	UniProtKB/TrEMBL
NCBI Gene	FHL5	ENTREZGENE
PANTHER	FOUR AND A HALF LIM DOMAINS PROTEIN 5	UniProtKB/TrEMBL
	PTHR24205	UniProtKB/TrEMBL
Pfam	LIM	UniProtKB/TrEMBL
PROSITE	LIM_DOMAIN_1	UniProtKB/TrEMBL
	LIM_DOMAIN_2	UniProtKB/TrEMBL
SMART	LIM	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
UniProt	A0A4X1VD49	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VJU8	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QZT7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1A3S2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1A6S7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1WR61	ENTREZGENE, UniProtKB/TrEMBL
	F1RY03	ENTREZGENE
UniProt Secondary	F1RY03	UniProtKB/TrEMBL
VGNC ID	VGNC:88130	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD