CPA4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 18 | 18,530,867 - 18,553,634 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 18 | 18,528,998 - 18,553,944 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 18 | 19,395,015 - 19,408,487 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CPA4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 130,293,161 - 130,324,180 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 130,293,134 - 130,324,180 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 129,933,001 - 129,964,020 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 129,720,230 - 129,751,250 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 129,526,964 - 129,557,968 | NCBI | | | | | Celera | 7 | 124,728,740 - 124,759,787 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q32.2 | NCBI | | | | | HuRef | 7 | 124,295,376 - 124,326,433 (+) | NCBI | | HuRef | | | CHM1_1 | 7 | 129,866,434 - 129,897,482 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 131,606,545 - 131,637,922 (+) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 129,318,357 - 129,349,405 (+) | NCBI | | | | |
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Cpa4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 30,568,368 - 30,592,417 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 30,568,368 - 30,592,417 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 30,568,369 - 30,592,418 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 30,568,369 - 30,592,418 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 30,518,376 - 30,541,747 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 30,518,386 - 30,541,757 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 30,578,234 - 30,601,732 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | A3.3 | NCBI | | | | | cM Map | 6 | 12.52 | NCBI | | | | |
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Cpa4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 60,155,675 - 60,179,644 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 59,188,284 - 59,212,255 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 59,188,284 - 59,212,255 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 64,166,435 - 64,190,319 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 60,082,621 - 60,106,503 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 58,484,547 - 58,508,431 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 57,883,849 - 57,907,826 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 57,883,849 - 57,907,826 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 57,644,770 - 57,668,743 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 57,479,967 - 57,503,748 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 54,286,758 - 54,310,882 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22 | NCBI | | | | |
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Cpa4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955479 | 10,940,215 - 10,966,081 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955479 | 10,940,269 - 10,963,629 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CPA4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 6 | 167,114,272 - 167,146,577 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 19,124,536 - 19,155,770 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 122,266,946 - 122,289,742 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 134,776,768 - 134,807,678 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 134,776,768 - 134,807,678 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CPA4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 14 | 6,613,878 - 6,642,833 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 14 | 6,621,039 - 6,642,793 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 14 | 6,301,778 - 6,328,836 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 14 | 6,376,095 - 6,403,156 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 14 | 6,381,873 - 6,403,090 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 14 | 6,581,072 - 6,608,656 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 14 | 6,326,280 - 6,353,327 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 14 | 6,469,905 - 6,496,964 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cpa4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 24,818,561 - 24,840,243 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936579 | 4,952,365 - 4,972,837 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936579 | 4,952,235 - 4,972,842 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CPA4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 21 | 98,924,054 - 98,979,674 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 98,924,100 - 98,955,260 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666042 | 4,448,540 - 4,479,752 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cpa4 (Heterocephalus glaber - naked mole-rat) |
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