RBM38 (RNA binding motif protein 38)

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Gene: RBM38 (RNA binding motif protein 38) Sus scrofa

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Symbol:

RBM38

Name:

RNA binding motif protein 38

RGD ID:

14173185

Description:

ENCODES a protein that exhibits mRNA binding (inferred); RNA binding (inferred); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (ortholog); DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

RNA-binding protein 38; RNA-binding region (RNP1, RRM) containing 1; RNPC1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	57,783,154 - 57,797,990 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	57,783,156 - 57,802,495 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	64,947,372 - 64,962,216 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Colorectal Neoplasms (ISO)

Neoplasm Invasiveness (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

3'-UTR-mediated mRNA stabilization (ISO)

cell differentiation (IEA)

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (ISO)

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (ISO)

mRNA processing (IEA)

negative regulation of cell population proliferation (ISO)

regulation of cell cycle (ISO)

regulation of myotube differentiation (IEA)

regulation of RNA splicing (IBA,IEA)

RNA splicing (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IBA,IEA)

nucleus (IBA,IEA)

Molecular Function

mRNA 3'-UTR binding (IBA)

mRNA binding (IEA)

protein binding (ISO)

RNA binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RBM38
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	57,783,154 - 57,797,990 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	57,783,156 - 57,802,495 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	64,947,372 - 64,962,216 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBM38
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	57,391,396 - 57,409,333 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	57,391,396 - 57,409,333 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	55,966,452 - 55,984,389 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	55,399,870 - 55,417,795 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	55,399,869 - 55,417,790	NCBI
Celera	20	52,706,709 - 52,724,603 (+)	NCBI		Celera
Cytogenetic Map	20	q13.31	NCBI
HuRef	20	52,749,536 - 52,765,964 (+)	NCBI		HuRef
CHM1_1	20	55,867,425 - 55,885,455 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	59,169,162 - 59,187,091 (+)	NCBI		T2T-CHM13v2.0

Rbm38
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	172,863,722 - 172,876,527 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	172,862,291 - 172,876,527 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	173,021,891 - 173,034,734 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	173,020,498 - 173,034,734 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	172,847,403 - 172,860,235 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	172,664,872 - 172,677,673 (+)	NCBI		MGSCv36	mm8
Celera	2	178,987,275 - 179,000,104 (+)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	95.67	NCBI

Rbm38
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	182,219,898 - 182,232,723 (+)	NCBI		GRCr8
mRatBN7.2	3	161,801,577 - 161,814,381 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	161,801,577 - 161,814,381 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	165,613,416 - 165,625,997 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	174,112,358 - 174,124,939 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	171,854,175 - 171,866,756 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	171,037,891 - 171,050,500 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	171,037,957 - 171,050,475 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	177,104,361 - 177,116,965 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	163,885,488 - 163,898,314 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	163,785,484 - 163,804,355 (+)	NCBI
Celera	3	160,995,091 - 161,007,892 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

Rbm38
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	2,036,124 - 2,052,139 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	2,036,314 - 2,050,882 (-)	NCBI	ChiLan1.0	ChiLan1.0

RBM38
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	63,142,478 - 63,160,533 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	63,135,598 - 63,153,644 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	53,731,641 - 53,749,688 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	55,010,623 - 55,027,746 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

RBM38
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	42,396,356 - 42,410,543 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	42,396,352 - 42,409,240 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	41,643,647 - 41,658,028 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	43,261,581 - 43,275,949 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	43,261,408 - 43,275,957 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	42,346,444 - 42,360,811 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	42,486,219 - 42,500,591 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	43,144,439 - 43,158,828 (+)	NCBI		UU_Cfam_GSD_1.0

Rbm38
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	183,056,936 - 183,072,570 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936530	227,266 - 249,285 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBM38
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	6,709,975 - 6,727,534 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	6,711,458 - 6,727,353 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	54,772,349 - 54,789,867 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbm38
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	23,854,023 - 23,868,345 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	23,854,069 - 23,868,016 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RBM38
593 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	22	3	2	5	14	12	22	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001105312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013985483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002339821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002339822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR956362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01090262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000008216 ⟹ ENSSSCP00000007997

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	57,783,154 - 57,797,990 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000077206 ⟹ ENSSSCP00000061347

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	57,783,154 - 57,797,442 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000079961 ⟹ ENSSSCP00000062191

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	57,789,515 - 57,797,982 (+)	Ensembl

RefSeq Acc Id:

NM_001105312 ⟹ NP_001098782

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	57,783,156 - 57,797,995 (+)	NCBI

Sequence:

show sequence

AGTGCCCGCAGCGCCGGCTGAAACGCGGCGCGGCGCAGCGCAGCGCGGCGCGCACGGCGGGAGC
GACCCGCGAGTGGACGGGCCCGGCGGTTGGACCGGCGCCTCTGCTGCCCCGCTCGCTCCCCGCC
GCCCCCAATGAGCGCAGCCCCACGCGGCCCAGGTCCGTAGGCGGCTGGGCGCCCTCCATGCTGC
TGCAGCCCGCGCCGTGCGCCCCAAGCGCGGGCTTCCCGCGGCCCCCGGCCGCCCCCGGCGCCAT
GCACGGCTCGCAGAAGGACACCACGTTCACCAAGATCTTCGTGGGCGGCCTGCCCTACCACACC
ACCGACGCCTCGCTCAGGAAGTACTTCGAGGGCTTCGGGGACATCGAAGAGGCCGTGGTCATCA
CCGACCGCCAGACGGGCAAGTCCCGCGGCTACGGCTTCGTGACTATGGCAGACCGGGCGGCAGC
TGAGAGGGCTTGCAAAGACCCTAACCCCAACATCGACGGCCGCAAGGCCAACGTGAACCTGGCC
TATCTGGGTGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCATCGGCGTGCAGCAGCTGCACC
CCACCTTGATCCAGCGGACTTACGGGCTCACCCCCCACTACATCTACCCACAAGCCATCGTCCA
GCCCAGCGTGGTGATCCCGGCCGCCCCGGTCCCGTCGCTGTCCTCGCCCTACATCGAGTACACG
CCGGCCAGCCCGGCCTACGCCCAGTACCCGCCGGCCACCTATGACCAGTACCCATACGCCGCCT
CGCCCGCCACAGCCGCCAGCTTCGTGAGCTACGGCTACCCGGCCGCCGTGCCCCAGGCCCTCTC
GGCGGCAGCCCCCGCGGGCACCGCCTTCGTGCAGTACCAGCCTCCGCAGCTGCAGCCGGACAGG
ATGCAGTGAGGGCCGCTCCGGCCACCGCAGCCCCGTCACCATGTGCTGGGCGGGCGCTGGCCGA
GCCCCGGGGTGCACGCCTGCACCTGTGCCTCGGGAGACCCCGCGGGGCCCCGCCTGCACCCCGA
ACGCCCAGAGACCACTTCTCTTTACACCCAGGACCGTCGTGTCTGGAGAGAGGACTTCGAGAGG
AAAGAATGCCCGCGAGCTAGTTGAACATCGGCCAGAACGCGCACACGCCGCCGGCCTCTCCCTT
CACCGTCCCCGCCCTTGCGCCCCCCGGGAGCCCCGGGGCGGTCCCCCCGCATCGGCCGGGCCTT
CCAGACCTCCCACAGATCCCAGCCGCCCTTTGGGGTGAGCAGAAACTTTGTCCCGCTCGGAGAG
GCCTTTCCCGCTCGGAGGGGAGCCCAGAAGCGCGCGGCTCGCTGTCACTCCACCTGCGCGGCGG
AACCGGGAACCCGCGTCAGGGGGAAACGCCACCTCCTGAATTCCCGTTTTCTACGTGATGCCCT
GGGGGCGGCTTCCTGCAGACCACCCCCCGTGGGGCCACCGGCCATCAGCGACCTGCGCCAGGGC
AGCCGGCCGAAGTCCTTTCTGTCAAAGCACTGCGACTTTTTTCTTACCGTCATTGTTTTGCTAC
TAAGATGATTTCAGAGTTTCAGTCTATTTTTTCAGTGGAGACTCCCACCACCGAGAATCCAAAA
CCTGTTTTTTGATGTTGAGAGACTCACTTCTGTCGATGGCTCCGCCCAAGGGGATAGTGACCGT
CCTTCTGTGATCAGGTGCCCAAGCCCCCGGGGGGTGGCGGCGGGGGGGGGGGCATCTCCAGAGA
GTGAGTTGTCTCAAGCTTGTCCCCCTCTGCACAGCCCGGACGTGATGCTGGCTGCGGGGCCAGA
CCTTGGTGCAGGATGGCCCCCCCACCCCCAGTGTCCCTGCTGCCTGTCAGCCTGAGCCGCAGAA
TTGAGCTGAGACACATCTGCCTCCCTTGGGGGCCTGGTGGGGAGGGGGAGGTGACAATGCCAAC
ACACTGTGAAGCGGGGGGAGAGTGAGAGGAGGGCGGTGGCCTGGCAGAGGGGACAGGCTGAGAG
CGTTTGGGGGTGGGGGGCGGGCCAGAAGGTTGGGGGGCGCTGGGGTGTTCCTTCAGACCTACCT
CAGGGAAGTGGGAGGCCTCAGGGCTGACGTACGTGGGCACGCGCTTCATGGCACGCCTGGCGCA
GAGTCAAGGCCCAGAAAATAAAGGTAGCTAATATTATAATATTTTTATTAGAACGTTCTGATTA
TAAAAATAAAACTTGTTTTCGTTAAAGAAAAA

hide sequence

RefSeq Acc Id:

XM_013985483 ⟹ XP_013840937

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	57,785,761 - 57,797,997 (+)	NCBI

Sequence:

show sequence

TAAGACCTGCTGCCTGGGAGAGGACAGAAACTTCAGGGGCACAAAGGAGCCTGAGACACCATTT
ACCTTCCCAGCCCCATGATTGATGTACCTACTGTGTGCCCAGTGCAGGGAGCATGCTGACGGGG
GTCGGGGTTTGTTGCTGGGATGGGGGCAGTTATAAATCAGGCCGCCCTTCTAAAGTGTTAGAGC
TTCTTAAGCCATTAGAGACCAAATCCCCAGCCCTGTGTTTTGTGCTGAAAGTTGGGGGTACATG
TGTGTGCGTGAGCGCCTATTCCAGCAAGGGGCGGTATGCGGGCACCCAGCTCCCCGGGGAGCTG
GAGCAGGTTGGGAGCTGGGCTCGGGTGGACCAGGCAGGTCAGCGCTTCGGGGCTGCTCCCCGTG
ACAGGCGGCTTCTGTGGCTGCACCGTGGCTTCTGCCTGGATCGCAGGATGTGCGTGAGCCCAGC
TCCTTCCTGTCCTGGGAAGAAGCCTGGAGGGCAGCCGGGAGCAGGTGGTTCTGTGTTTCCTTCT
TGCTCTGGGATCCGCTTCTTCCGAGCCTGCAGGCATCTTAGAAGGTGTTTGGGGACACCTCCGT
CTTCCTGCCGGCACCCAGATTCTTCCTCTTTGAGTTCAGGCCTCGCAAGGAGGGTGTTCCATGC
TATGGGCAGCCGTGGCTCTCTCCCAGGGGCTGGGGCAGGGCTGGCCCCGACTGCAGGTGTGAGC
ACATGTAGCTCTTTCCTGCTTGAAGTGCGACAGTACCTTCCCGTTCCAGCTTGAGCTCCTTTCT
GACCCAAAACAGCTGCCTCTGGGACTTGGTGACTATCAGCCCGTGGCCTCTGGAGCCTGCAGAC
CTGGGTTCAAGTCTTGGCTGTCACTTACCAGTGACTCCATCTTGGCTAGAGACATCCTCTTCCC
GAGCCTCCAGTTTCCTCATCTGGAAAATGGGAATAATACTGCCTAAGGCAGTGCCGATGCGCAG
GGGGGCCCCCCTGCACTCTCTGCTGTCCTCACAGCCATCCTCAGGTTGGGACTGAAGTCAGTCC
TGCTTCATAGATGGCGAAACTGGCAAAGGTTTAAAAAAAACGTTAACAACCTGTCCAGGCAGCT
GAAGTGACGGGATTTGAACCCACGCAGGCTGGCTCAGGAACGCACACACAGCACTGCTTCCCGG
GTGGGCAAGGAGGAAGGGTGCCCCTCGTGGTCCTCAGAGCCCCGCGTGAGGATAGTCGGGTGTC
GGTCACAGATTTTCCTGCCGTGTGCTCCTGACTTCGGGTGCCAGTGTTTTGTAACTGGGTGTGC
TGTCTGGCTGTTTTATACCTGTGACGATGAAGAGGCTCCGGCTCTGTGCGTTGCCAGGGGGTGG
AGACCCAAACAAGGGCAAGGGGTCAGAGGGACTGTCCCCTCCTCGTTTCTGGGGGCTGGGGCAC
TGCAGCCCATCAGGGTCGTGCCACCTCCCCCCAGGCATCGCTGAGACGGGTGCAGAGCCAGGCA
GCCAGGCTCAGCCTCCTCCCCGCGCCCACCTGCCTGGCCCGAGAGCTGGGCCGTCAGCGTCCCT
TTTGTCTTTGCAAACAATTGGGCCGGGAGCTCGGCAGGCCTGACTCAGCGGTCAGTTTTGTCAG
CTCCGGGCTGGCAGCGAGGCCCGGCCGGCCGGTGGCTGGCTGAGGGCACGGAGGGAGCTGGCCC
TGGTGGCTCAGGGTTTGCAAACCCGTTAACTCTCTCTTGCCTGGCGGAACTTTCCCCAGACTTT
CTGGCCCCGATACGCGCCTTGGACAGCTCTAAAGATTCCACAGCCCCGCTTTGGGGCAAGGCTA
CTGCGGAGTCCTCACCTGGCTGGGTCATAGGTGTCGGCGTGGAAAGGTTTGCCGAAGAAGCTTT
ATGCTGCCTGCTTTTGGCTCAGATTCCCTGGCCCCAGCCATCTCTCAGAAGCTGACCGGACCGG
GGTGTTTCTCTCATGTAACTGAACGTGGGCTGAGGTCTGGGTGTGAGAAGGCTTCCTTGGCAGG
TGGCAGGGGGCTTTATCACAGGGGACGGACGACACAGACGTCCTTGGCTGATGGGGCGGGACAG
TCGGCAGCCTGCAGGCAGGAGAGAAAGGCGCGTTCCAGGCAGAGCGTTGGGTCTGGCTTGCAAG
GTGTGTCCTGGTGTCCGGGCTGTCTCTCCCCTGCCAGGAGCTGGGGTCTGTCCTGGGCCTGGCT
GCTCTCAGAGCCCCACCTGGGGTTATTTTTGAAGGGACAGCTGCCTCTGGGCACAGCTTCCCTG
ATCCTGTTCTTAAGGGGGCCTTGCTGGGGGCTCCACACCCATTTACCACAAGCCTCGCTCTGGG
CCAGGCATGGGGCCAGGCCCTGGGGGTCCAGAGGGCAGGACGGGCTCCTGGACTGCGGGGTGGT
AGGCAGGCCTTGTGCTGGAGCAGAGACCCAGGGGCCTGCCTGGGCTTGCGGCCAGTCCCGGACC
TGCTCTCTGGGCTCATCTCCCTGTCCGCGTGGTGGGGACCATGTTGGTGCCACCTCTTTGGCCT
GCCCAGGGACAGTGCATGCCTGTGTGCAGAGGTGGTCAATGGGGGCCTGGCCCTCGAGAAGAGA
GCGGTGTACCCGTGACTCATTTCCCAGCCCCTTGACATGGTCTGTCGCCCCTGCTCCTGTGCCG
GCACCGGGCGAGGGCTCAGCAGGGGATTCTGACACCCTCCTCCCTTCCCCGAGGCCCCCCGCAC
CCTCGCTCTGACCAGCTCTTAGGCAGATCAGCACCCCCGGGACTGACCAGGGCCTGATCGCGTG
CAGCCCCACGTGGCCTCCAGTTTCAGAGATCCCTGCACCCTCTGTGTGAAAGTCCCCAGCGTCA
GGTTGGGACCCGCTGCCCTTGTGTTACTCAGGCCGAGGGGTCTGAGTGCAGCGCCTGTGTCCCC
AGGGCGGGAGGGGGGCTAGAGGGTGACAGGACGCGTCAGTTTGCCCAAAGCACGGAGCACATGG
GGCTCGGTGAATGGAGAGAGCTGTTTCTAGACACTTTCATTCATCAAGTTGTGTACTTATTGAG
TGCCTGCTGTATGCCAGGCCTTGTGCCCGGGGAACTCTGAATAAGAGAGACATGGCCGGGTCTC
CATCTCACTTCTGACGGGGAAGCTAGGCTGTTGAAAGTCCATCTGTGCACGTGAGGGCCCGAGG
CGGGCGCGGGGGCTGCTGGCGGAGGGAGGGCCAGATGGGGCCCGCGGACCTGCCTTGAGATCGT
CGCGGGAGGTGGAGGATTTGCGTGTGAGAGGCAGACTGACACGCCGAAAAACGGTGCAATATTC
AGCCACGGCCTGGGTCCCAGCTCATAGCAAGGTGGAGTGTGGGGCTCCTGGACTGGAAAACACA
TTGGGTTATGAGATGTCACCCCTGGGGACACCGTGGCAGGGCACGTGGGGTCCCTGTACTGTAT
TTGCACTTTCTGGGAATTTTATCATCATTTCCTACTACGACGTCAGTAAAGCCAGGACATCACA
GAGCCCTGAACGGGGGTCGGCGCCGTGGGGGTGGGGCGGCACCTTCGGGGGAGGGGCAGGAAGT
GAGGTCAGAGCTGGAGGCCGTGGGGCTGCGGTGCCCTCCCCGCGTGCCATCACGTGGTTTGTTT
TTACTTTCAGGGTGTCTGGGGTGGCCCTTGCCCCCCTCCCCCCCCACAGTCGCTTCCTGTTTGG
CACTCGCTGGAGCGAGGCGTGGGCCCGCGTGTGGCCCTGCCCGGCGGGCGGCCCGTGCACACCT
GTTGTTTGTCCCCGTCGGCTGCAACAGAAACCAGCCTCTGGGGCGGTTCTTGGGCTCCTGTCCA
AGGATGAGCTGCTGGCCCGGCCCCGCTGGCCCTGGCAGGAGGGGCCCCCCGTGCCCAGGGCCTC
GCCCGGAAGCCTCGGGCCCCAGGGGAGAGGCCGGACCACACTCAGGCTGACACGGGCGTCTGAC
TCGGCCCCAGGGCTCACCCCCCACTACATCTACCCACAAGCCATCGTCCAGCCCAGCGTGGTGA
TCCCGGCCGCCCCGGTCCCGTCGCTGTCCTCGCCCTACATCGAGTACACGCCGGCCAGCCCGGC
CTACGCCCAGTACCCGCCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCCGCCACAGCC
GCCAGCTTCGTGAGCTACGGCTACCCGGCCGCCGTGCCCCAGGCCCTCTCGGCGGCAGCCCCCG
CGGGCACCGCCTTCGTGCAGTACCAGCCTCCGCAGCTGCAGCCGGACAGGATGCAGTGAGGGCC
GCTCCGGCCACCGCAGCCCCGTCACCATGTGCTGGGCGGGCGCTGGCCGAGCCCCGGGGTGCAC
GCCTGCACCTGTGCCTCGGGAGACCCCGCGGGGCCCCGCCTGCACCCCGAACGCCCAGAGACCA
CTTCTCTTTACACCCAGGACCGTCGTGTCTGGAGAGAGGACTTCGAGAGGAAAGAATGCCCGCG
AGCTAGTTGAACATCGGCCAGAACGCGCACACGCCGCCGGCCTCTCCCTTCACCGTCCCCGCCC
TTGCGCCCCCCGGGAGCCCCGGGGCGGTCCCCCCGCATCGGCCGGGCCTTCCAGACCTCCCACA
GATCCCAGCCGCCCTTTGGGGTGAGCAGAAACTTTGTCCCGCTCGGAGAGGCCTTTCCCGCTCG
GAGGGGAGCCCAGAAGCGCGCGGCTCGCTGTCACTCCACCTGCGCGGCGGAACCGGGAACCCGC
GTCAGGGGGAAACGCCACCTCCTGAATTCCCGTTTTCTACGTGATGCCCTGGGGGCGGCTTCCT
GCAGACCACCCCCCGTGGGGCCACCGGCCATCAGCGACCTGCGCCAGGGCAGCCGGCCGAAGTC
CTTTCTGTCAAAGCACTGCGACTTTTTTCTTACCGTCATTGTTTTGCTACTAAGATGATTTCAG
AGTTTCAGTCTATTTTTTCAGTGGAGACTCCCACCACCGAGAATCCAAAACCTGTTTTTTGATG
TTGAGAGACTCACTTCTGTCGATGGCTCCGCCCAAGGGGATAGTGACCGTCCTTCTGTGATCAG
GTGCCCAAGCCCCCGGGGGGTGGCGGCGGGGGGGGGGGCATCTCCAGAGAGTGAGTTGTCTCAA
GCTTGTCCCCCTCTGCACAGCCCGGACGTGATGCTGGCTGCGGGGCCAGACCTTGGTGCAGGAT
GGCCCCCCCACCCCCAGTGTCCCTGCTGCCTGTCAGCCTGAGCCGCAGAATTGAGCTGAGACAC
ATCTGCCTCCCTTGGGGGCCTGGTGGGGAGGGGGAGGTGACAATGCCAACACACTGTGAAGCGG
GGGGAGAGTGAGAGGAGGGCGGTGGCCTGGCAGAGGGGACAGGCTGAGAGCGTTTGGGGGTGGG
GGGCGGGCCAGAAGGTTGGGGGGCGCTGGGGTGTTCCTTCAGACCTACCTCAGGGAAGTGGGAG
GCCTCAGGGCTGACGTATGTGGGCACGCGCTTCATGGCACGCCTGGCGCAGAGTCAAGGCCCAG
AAAATAAAGGTAGCTAATATTATAATATTTTTATTAGAACGTTCTGATTATAAAAATAAAACTT
GTTTTCGTTAAAGAAAAAGT

hide sequence

RefSeq Acc Id:

XR_002339821

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	57,785,761 - 57,802,495 (+)	NCBI

Sequence:

show sequence

TAAGACCTGCTGCCTGGGAGAGGACAGAAACTTCAGGGGCACAAAGGAGCCTGAGACACCATTT
ACCTTCCCAGCCCCATGATTGATGTACCTACTGTGTGCCCAGTGCAGGGAGCATGCTGACGGGG
GTCGGGGTTTGTTGCTGGGATGGGGGCAGTTATAAATCAGGCCGCCCTTCTAAAGTGTTAGAGC
TTCTTAAGCCATTAGAGACCAAATCCCCAGCCCTGTGTTTTGTGCTGAAAGTTGGGGGTACATG
TGTGTGCGTGAGCGCCTATTCCAGCAAGGGGCGGTATGCGGGCACCCAGCTCCCCGGGGAGCTG
GAGCAGGTTGGGAGCTGGGCTCGGGTGGACCAGGCAGGTCAGCGCTTCGGGGCTGCTCCCCGTG
ACAGGCGGCTTCTGTGGCTGCACCGTGGCTTCTGCCTGGATCGCAGGATGTGCGTGAGCCCAGC
TCCTTCCTGTCCTGGGAAGAAGCCTGGAGGGCAGCCGGGAGCAGGTGGTTCTGTGTTTCCTTCT
TGCTCTGGGATCCGCTTCTTCCGAGCCTGCAGGCATCTTAGAAGGTGTTTGGGGACACCTCCGT
CTTCCTGCCGGCACCCAGATTCTTCCTCTTTGAGTTCAGGCCTCGCAAGGAGGGTGTTCCATGC
TATGGGCAGCCGTGGCTCTCTCCCAGGGGCTGGGGCAGGGCTGGCCCCGACTGCAGGTGTGAGC
ACATGTAGCTCTTTCCTGCTTGAAGTGCGACAGTACCTTCCCGTTCCAGCTTGAGCTCCTTTCT
GACCCAAAACAGCTGCCTCTGGGACTTGGTGACTATCAGCCCGTGGCCTCTGGAGCCTGCAGAC
CTGGGTTCAAGTCTTGGCTGTCACTTACCAGTGACTCCATCTTGGCTAGAGACATCCTCTTCCC
GAGCCTCCAGTTTCCTCATCTGGAAAATGGGAATAATACTGCCTAAGGCAGTGCCGATGCGCAG
GGGGGCCCCCCTGCACTCTCTGCTGTCCTCACAGCCATCCTCAGGTTGGGACTGAAGTCAGTCC
TGCTTCATAGATGGCGAAACTGGCAAAGGTTTAAAAAAAACGTTAACAACCTGTCCAGGCAGCT
GAAGTGACGGGATTTGAACCCACGCAGGCTGGCTCAGGAACGCACACACAGCACTGCTTCCCGG
GTGGGCAAGGAGGAAGGGTGCCCCTCGTGGTCCTCAGAGCCCCGCGTGAGGATAGTCGGGTGTC
GGTCACAGATTTTCCTGCCGTGTGCTCCTGACTTCGGGTGCCAGTGTTTTGTAACTGGGTGTGC
TGTCTGGCTGTTTTATACCTGTGACGATGAAGAGGCTCCGGCTCTGTGCGTTGCCAGGGGGTGG
AGACCCAAACAAGGGCAAGGGGTCAGAGGGACTGTCCCCTCCTCGTTTCTGGGGGCTGGGGCAC
TGCAGCCCATCAGGGTCGTGCCACCTCCCCCCAGGCATCGCTGAGACGGGTGCAGAGCCAGGCA
GCCAGGCTCAGCCTCCTCCCCGCGCCCACCTGCCTGGCCCGAGAGCTGGGCCGTCAGCGTCCCT
TTTGTCTTTGCAAACAATTGGGCCGGGAGCTCGGCAGGCCTGACTCAGCGGTCAGTTTTGTCAG
CTCCGGGCTGGCAGCGAGGCCCGGCCGGCCGGTGGCTGGCTGAGGGCACGGAGGGAGCTGGCCC
TGGTGGCTCAGGGTTTGCAAACCCGTTAACTCTCTCTTGCCTGGCGGAACTTTCCCCAGACTTT
CTGGCCCCGATACGCGCCTTGGACAGCTCTAAAGATTCCACAGCCCCGCTTTGGGGCAAGGCTA
CTGCGGAGTCCTCACCTGGCTGGGTCATAGGTGTCGGCGTGGAAAGGTTTGCCGAAGAAGCTTT
ATGCTGCCTGCTTTTGGCTCAGATTCCCTGGCCCCAGCCATCTCTCAGAAGCTGACCGGACCGG
GGTGTTTCTCTCATGTAACTGAACGTGGGCTGAGGTCTGGGTGTGAGAAGGCTTCCTTGGCAGG
TGGCAGGGGGCTTTATCACAGGGGACGGACGACACAGACGTCCTTGGCTGATGGGGCGGGACAG
TCGGCAGCCTGCAGGCAGGAGAGAAAGGCGCGTTCCAGGCAGAGCGTTGGGTCTGGCTTGCAAG
GTGTGTCCTGGTGTCCGGGCTGTCTCTCCCCTGCCAGGAGCTGGGGTCTGTCCTGGGCCTGGCT
GCTCTCAGAGCCCCACCTGGGGTTATTTTTGAAGGGACAGCTGCCTCTGGGCACAGCTTCCCTG
ATCCTGTTCTTAAGGGGGCCTTGCTGGGGGCTCCACACCCATTTACCACAAGCCTCGCTCTGGG
CCAGGCATGGGGCCAGGCCCTGGGGGTCCAGAGGGCAGGACGGGCTCCTGGACTGCGGGGTGGT
AGGCAGGCCTTGTGCTGGAGCAGAGACCCAGGGGCCTGCCTGGGCTTGCGGCCAGTCCCGGACC
TGCTCTCTGGGCTCATCTCCCTGTCCGCGTGGTGGGGACCATGTTGGTGCCACCTCTTTGGCCT
GCCCAGGGACAGTGCATGCCTGTGTGCAGAGGTGGTCAATGGGGGCCTGGCCCTCGAGAAGAGA
GCGGTGTACCCGTGACTCATTTCCCAGCCCCTTGACATGGTCTGTCGCCCCTGCTCCTGTGCCG
GCACCGGGCGAGGGCTCAGCAGGGGATTCTGACACCCTCCTCCCTTCCCCGAGGCCCCCCGCAC
CCTCGCTCTGACCAGCTCTTAGGCAGATCAGCACCCCCGGGACTGACCAGGGCCTGATCGCGTG
CAGCCCCACGTGGCCTCCAGTTTCAGAGATCCCTGCACCCTCTGTGTGAAAGTCCCCAGCGTCA
GGTTGGGACCCGCTGCCCTTGTGTTACTCAGGCCGAGGGGTCTGAGTGCAGCGCCTGTGTCCCC
AGGGCGGGAGGGGGGCTAGAGGGTGACAGGACGCGTCAGTTTGCCCAAAGCACGGAGCACATGG
GGCTCGGTGAATGGAGAGAGCTGTTTCTAGACACTTTCATTCATCAAGTTGTGTACTTATTGAG
TGCCTGCTGTATGCCAGGCCTTGTGCCCGGGGAACTCTGAATAAGAGAGACATGGCCGGGTCTC
CATCTCACTTCTGACGGGGAAGCTAGGCTGTTGAAAGTCCATCTGTGCACGTGAGGGCCCGAGG
CGGGCGCGGGGGCTGCTGGCGGAGGGAGGGCCAGATGGGGCCCGCGGACCTGCCTTGAGATCGT
CGCGGGAGGTGGAGGATTTGCGTGTGAGAGGCAGACTGACACGCCGAAAAACGGTGCAATATTC
AGCCACGGCCTGGGTCCCAGCTCATAGCAAGGTGGAGTGTGGGGCTCCTGGACTGGAAAACACA
TTGGGTTATGAGATGTCACCCCTGGGGACACCGTGGCAGGGCACGTGGGGTCCCTGTACTGTAT
TTGCACTTTCTGGGAATTTTATCATCATTTCCTACTACGACGTCAGTAAAGCCAGGACATCACA
GAGCCCTGAACGGGGGTCGGCGCCGTGGGGGTGGGGCGGCACCTTCGGGGGAGGGGCAGGAAGT
GAGGTCAGAGCTGGAGGCCGTGGGGCTGCGGTGCCCTCCCCGCGTGCCATCACGTGGTTTGTTT
TTACTTTCAGGGTGTCTGGGGTGGCCCTTGCCCCCCTCCCCCCCCACAGTCGCTTCCTGTTTGG
CACTCGCTGGAGCGAGGCGTGGGCCCGCGTGTGGCCCTGCCCGGCGGGCGGCCCGTGCACACCT
GTTGTTTGTCCCCGTCGGCTGCAACAGAAACCAGCCTCTGGGGCGGTTCTTGGGCTCCTGTCCA
AGGATGAGCTGCTGGCCCGGCCCCGCTGGCCCTGGCAGGAGGGGCCCCCCGTGCCCAGGGCCTC
GCCCGGAAGCCTCGGGCCCCAGGGGAGAGGCCGGACCACACTCAGGCTGACACGGGCGTCTGAC
TCGGCCCCAGGGTGCGTCCCAGAGCAGGAGCGGGGACAAGGGCGCCGGGGGGCGGCCCGGGCCT
TGGTGCTGCGGCGCAAGGGGGCTGCATGGGTGTCTGGAGGCTCCACAATTCGTCTGGGGTCCTT
GTTCTCGTGACTTTTCACCCTCGAGCCTCAGTTTCCCCGCCTGCCACGTGGACGTGACGAGTGC
ACGGCAGTGTGGGGGGGCTCTGGATCATTCTCTCGACCCTCCCTCGTGGGTGAAAGGAGGACGC
TGTGCTTTCGTCCGGCCAGTTTGCTCGGAGGACATTTGCTGGCTTTGTGGCAGGCTGGGGGCTC
CGTGGGGACGCAGGGAGCCCTGGTCCTGCTTGTGATCCCGGAGCTTCTGCGGCAGAGCTGCCAT
GGCTCAGGTGGTGACAGGTGCTCTGGGCGGGAAGGGTGCGCCAGGCGGGAGGCTGGTGGGAGTG
GTGGGAGAACGTGGGGGGGTTGGGGAGATCAGGGACCCAGCAGGGTGGCCTCAGCTCGCCGCCC
ACGGAGCGTTTGCATTTTACTCTGAGTGATGGGGGCTGGTGTGGGCCCTGCGGAGGTGACGGCT
GGCCTCCTGCATCCTGAAAGCATCCCTCTGGCTGCTGCTGGGCCTGGACCGCCGAGGCCAGGGG
GAAGGGCCCACGAGGGGACCGCGCAGTGGCCGTGGTGGCCGCCTGGACCAGCACTGAGGCTCAC
CCCCCACTACATCTACCCACAAGCCATCGTCCAGCCCAGCGTGGTGATCCCGGCCGCCCCGGTC
CCGTCGCTGTCCTCGCCCTACATCGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCGC
CGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCCGCCACAGCCGCCAGCTTCGTGAGCTA
CGGCTACCCGGCCGCCGTGCCCCAGGCCCTCTCGGCGGCAGCCCCCGCGGGCACCGCCTTCGTG
CAGTACCAGCCTCCGCAGCTGCAGCCGGACAGGATGCAGTGAGGGCCGCTCCGGCCACCGCAGC
CCCGTCACCATGTGCTGGGCGGGCGCTGGCCGAGCCCCGGGGTGCACGCCTGCACCTGTGCCTC
GGGAGACCCCGCGGGGCCCCGCCTGCACCCCGAACGCCCAGAGACCACTTCTCTTTACACCCAG
GACCGTCGTGTCTGGAGAGAGGACTTCGAGAGGAAAGAATGCCCGCGAGCTAGTTGAACATCGG
CCAGAACGCGCACACGCCGCCGGCCTCTCCCTTCACCGTCCCCGCCCTTGCGCCCCCCGGGAGC
CCCGGGGCGGTCCCCCCGCATCGGCCGGGCCTTCCAGACCTCCCACAGATCCCAGCCGCCCTTT
GGGGTGAGCAGAAACTTTGTCCCGCTCGGAGAGGCCTTTCCCGCTCGGAGGGGAGCCCAGAAGC
GCGCGGCTCGCTGTCACTCCACCTGCGCGGCGGAACCGGGAACCCGCGTCAGGGGGAAACGCCA
CCTCCTGAATTCCCGTTTTCTACGTGATGCCCTGGGGGCGGCTTCCTGCAGACCACCCCCCGTG
GGGCCACCGGCCATCAGCGACCTGCGCCAGGGCAGCCGGCCGAAGTCCTTTCTGTCAAAGCACT
GCGACTTTTTTCTTACCGTCATTGTTTTGCTACTAAGATGATTTCAGAGTTTCAGTCTATTTTT
TCAGTGGAGACTCCCACCACCGAGAATCCAAAACCTGTTTTTTGATGTTGAGAGACTCACTTCT
GTCGATGGCTCCGCCCAAGGGGATAGTGACCGTCCTTCTGTGATCAGGTGCCCAAGCCCCCGGG
GGGTGGCGGCGGGGGGGGGGGCATCTCCAGAGAGTGAGTTGTCTCAAGCTTGTCCCCCTCTGCA
CAGCCCGGACGTGATGCTGGCTGCGGGGCCAGACCTTGGTGCAGGATGGCCCCCCCACCCCCAG
TGTCCCTGCTGCCTGTCAGCCTGAGCCGCAGAATTGAGCTGAGACACATCTGCCTCCCTTGGGG
GCCTGGTGGGGAGGGGGAGGTGACAATGCCAACACACTGTGAAGCGGGGGGAGAGTGAGAGGAG
GGCGGTGGCCTGGCAGAGGGGACAGGCTGAGAGCGTTTGGGGGTGGGGGGCGGGCCAGAAGGTT
GGGGGGCGCTGGGGTGTTCCTTCAGACCTACCTCAGGGAAGTGGGAGGCCTCAGGGCTGACGTA
TGTGGGCACGCGCTTCATGGCACGCCTGGCGCAGAGTCAAGGCCCAGAAAATAAAGGTAGCTAA
TATTATAATATTTTTATTAGAACGTTCTGATTATAAAAATAAAACTTGTTTTCGTTAAAGAAAA
AGTCAGCCTGGCGTTTTTCCCTGGAAGTGGACGCCTCGACCCCCCCGGCCACCATGGTCGAGTC
ACGTCCGAGTCAGGGTCCCCCAGCGGAGGGCGGACCCCTCTCAGCATCCCCTGTGTGCAGAGCA
GGGCCCCGGGGGCGGCGGCTGGGGGAGGGCCTATGTGACTGGCGGCTCCATCAGAACCCCCTGG
ACCGGGGGAACTGGGCAGAAGCTGGTTGGAGCTGCAGAGAGGGCAGAGCAGCAGGTGTCCAGGC
TGCCTGCCGTTGGGTGCTGGCTGCCGGCGAGGCTGGAGGTCAGAGTAAGAAAGGGCCGTCTGGG
TCTGGGGGTGAGGGGCTCCAAGGCGGGAGAGTCCCGGCCTCTCCCACCGCTCAGCGCTGGGGGC
ATCCGAGGGCCTCCCGGAGGGGGCATGAAGGCTGGAGGGGAGGTTCCTCACTCGTTCCCGCAAG
CGCTCCCTCATTCGTTCATTCCAAGAAACGTCCTGTGTCGGGTCACATGCCAAGCACTGGGGGC
AGTCGTAAACAAGACCCACAGTCCTGCCCACTGGGCTTAGCAATCCAGTGGGCACACAGCATGC
CACCGGGTGGGGGAGGGGCAGCACAGGGAAGCGGGGCCTTTCAGACACGGGTCAGGACGTGTGA
CCGGGTGATGAGAATGACCGGGTGCTCGCCAGCGGGAACAGCAGGTGCAAAGGCCCGGGGACGG
GGGGTATGGGACAAGGAGGCCAGAGTGGCTGAAGAAGCCGCACGAGGGGGACGTGGGCGGGAGA
CAGGGCTGGGGAGGCAGCAGAGCCTCCGTGGGGGACGTGCTGTGAGCGCAGTCGGGCAGGGTGG
CACGCTCAGCACAGTGTGGTCCATGCCGTGCGGGGGGCAGGGCAGGACCGCACACGTGGGAGGA
GGCACGGGGGCAGCCGGGTGGAGGGGCTCCTGGGGATCTGGGGGAGTGGATTCGGTACCCCTGG
TGGGGAGGCCAGGCTGAGCAAGGCTTGGAGGTCGTGAGCTGGCCTGCTTTGGGACAGTTGCTGT
CGAGGCTCCACGCTTGTCCTCCCCTGACCTGCAGAGCAGGGCTTGGCCCCAGGGCGTATGCATC
TGCCCCTTTCTCCCTCCACCCCCTGCACAGGGGGTGCAGGGGCGGCCAGACTCCAGTTTCTCCG
GCCCCTCCCTCACCCTCCCTGTAAACTCCTGCTGAGCCTGTTTCCAATCTACCCCCTCCTCTGT
TCTCAGCCCCGGTCCAGGACCACCCCTCTCTCCTGGACCCTTGCTGCGGCCCCTTGCTTCTGCC
TGCGTGCTCCGGTCCACACTCCATGTGCAACCAGAGGGTCCTGTTGGGCATCAGTGGGAACATG
GCCCTTGCCAGCTCGGAGCCCTCTGTGGCTCCCTGCCATCCTCGAGGAAAGAGCCCAAGCTGTC
CCTGCGGGCAGTGAGACCTCTGCCCACACCAGGCACAGCCCGCTGCGGGACCTTTGCTCTTGCG
GTGGAATCCTCCAGCTTTTACCTGCTGGACTCCAGCCCTCAGCTCAGAAGTGTCTTTGTCCCCG
CAGCCGCCTCTGACCCCAGTCTTGGTCCAGGCAGCTGAGCCCTGTCCCCCTTCTTCTGTGTCTC
CCCTACCCGCCCCCCGCATGGGCATGCCCACTCCAGGGGGCAGGGCCATCTGCCTTGTTCCTGC
TCTGTCCCCCGCCCCGCAGGGCAACAGCCCCCCTGCATTTGGAACTTGACGGGGAAAGGGCATC
AGAGGTTTCTGGTGGAGGACAGTAGCGGGAGTTTGGGGACCGTCCGTCCAGGCTGGAGTGAGCT
GGGCGGATCGGGGCCGGAAGGCTGGGGGGAGGGACAGCTAGAGGCCAGAGCTGCTGCAGTGTCC
GCAGGGAACGGGACAGAAGTTGCTGAGGGGGAACAAGCCCTGCATGGAGCTGGGCAGCTGGCTG
TGATCCCAGAGTCCACCGATAGCTCCACACGGTCAGCCCTTGGCTTTGCAGTGAGAAGGGTCAC
CCTGCGTGGGGAGGTGGCTCCGGTGGGCTGGGGCCACATCCTCAGCCTGTCCTGAGGTCCTTGT
GGGGACCTCCTCCGGCCTTTCCCAGACCCTCTGACTTGCAGATTTGCTGGTTACCCGTCTGTGG
TCCAGGCCTCTGGCCTCTGCGCAGGGAACGCGCAGGGTTCCCGGGTCAAGTCAGGTGAGATCCT
GCCGGGCAGGGTCCCCCTTTTTACCAGGGACGCCCCCAATGCCCCACCCCTTGTCCCCTGCCCC
CTCCCTCTAGCTGGGTCTTAGTTGGCAAACACTGGCAAGAGGTCAGAGAGGTCAGCGTGGGGCT
CCCGGGCCGGAGGAGGCATTTGCTGCAGCTGATAAGGGCGGGGGGCCAGGGAGGGGGTTGCGGG
TGCTGCCAGGGTTATCTGGAGGGCCACTTGCAGCCAGCCTGTTTCCTGTCGCTATCGGCCGGTG
GCAGCCTCTGGGACAGGCCCGGGGCCTCAAAAACATCCTCCTGGGGCCCAGGATTGAGGGTCTG
GACTGTGGCAAACCCAGGAAAGGGCTTCCACGGTCCGGGCACCGAGTCGGGGCAGGAGCTAGCG
GGGGTGGCAGTGCTGCGGTCTGTGCACGTGGCGCATGACCACTTGTCCTGGCGGTAATGATTGT
AAATGACAGCAGTGAGCACGGCTGCCGGCACCCTAGGGGATCAGGGCTGTGCAAGCACTTCTTG
TGGACGGTCACTTACCCACGAAGGGACCCTTGAGGGCGTCCCCCTTGCACAGACGGGGAAACTG
AGACACGGGAGTGGAGCCACCACTGCCCGGGGCCTCAGGATCGATGTGGAGGTGAAGGGCGTTG
GCCTGACCCGTGGCCCTGGTCCCCCCAGGCCGCCACCTCCCTGAGCCTCACGGGGAAAGGGGCT
GTGACCGTCCTCTAGGGCTGGGGCTGTGTCCCTTCCCCGCTGTGTCCTCAGCAGACAGTGTACT
GAGAATGGGCACGGGTTGGTGAGGATGGGCTGTGGGCACCACCAGCTCCTCTCTCGTCAGCCCC
AGTCCCCGTGTCAGGGAGTCTTGGTCCCATACTCCCAGAGGGCCAGGCACACACGTGTGCACAG
ACACACGTACACGTCTGTGTACACATTAACACACACTCTCCCAACATACAGACACATATATGGA
CACAGACACAGACACGCCCGTGCCCCGCCCCGCAGACATCCACGCTCACGGAGGCAGAGACACG
GACACACACTCAGCCTCACACGCGCTCCTAGGTGCACAGACGTCTGCACACGTACATCTGTATT
CTACACGTGGACCCTGACACCCATAAATACGCAGAAACACACCCCCTGCGCACACATGGACACA
CACATAAACACGTCTATGCAGACACAGCACACATCTATGCGCTCAGACACACACATCCCCTCAC
ACCTGTTACATGACGAGCCCAGAGCCGCCGCCACGGCCTGGGCCCCACGCTGAGCAAGGGCCTC
GTGCCTCAGCAGCTGCCACGGTTTTGAAGGGGTCACAGTTTTGACTCTCCAGGACAAGAGAGGT
GGGACGCCAGGCAGGCGACGCCTGGTGGGCTGGGACGGCCTGGGCAGGAAGGAGGCGGTGGCAG
GGCCCGCTGGGTGAGGGGGCAGCAGGAGCAGAGTTTCCACGAGTGAATGGGCCTTCCCGGGGGG
CGGTTCCAGGCCTGCGGGGCAAAGAGACGGAGGAGGGAGCTTTGTGGTGGGGGCAGCCGGGGAG
GGAGGGGTGGCGGGGTTCCCAGGGCCGGGACCTCTGTTAGCCTGGGCCACGGCCATGGACGCAG
GGCATACGTTCCTGCCTGGGTCTGCCTGGCACTCCAGCTGGGGGAGGCACACGGGGCTCAGAGG
GTCCTGAGACCCTGTCCCCGGGACACTGATTTGGAGACCGCCAGCTGGAGAGGGGCAGAGGCAG
GTGACAAGAACATACAGAGGTGCTTCCGTTACCGGTTGGAGCCTCCTTATCCCACTTTCCAGAT
GAGCCACCTGAGGCCCAGGGAGAAGAAGGGCTCCTTTGAGGTTGCAGGGCTGTGGCTCCACCTC
TGGGGAGAGATTCTGAAAAGACTGGGCTGGGGCGTGGGCGGGGAGCACGGCCACCCAAGTCCAC
GAGAAGCCGCACAGTGTCACCTCCGCGCTGCCGCCCCAGGCCTGCTCTACCCCTTTCCCCTGGG
ATTGGGGGAGAGCGCTTGCTTAGCCCTCATTTTCTCGGAGCCTCAGTTTCTTTCTGCACAGATG
AGATGCCCTGGGTGGCACCTGCAGGAAACTGCCGGGCCAGTGTCCACCCCCTTCCTCAGGGAAC
AGGGCCTGGCACATTCTCCTCCCTGGCCCAGTGCCTAGGTCAGGAATAAACATGTAACCCATTG
TGAGCCAATGAGCATTAGTCCTGGATTTCTACTGGGACTTTACGGGGACGGAAGCTGTCTTTCT
GCTGGGGAAGCCAATCTGGGAGCAGATAAGCCTGGAGCT

hide sequence

RefSeq Acc Id:

XR_002339822

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	57,785,761 - 57,802,495 (+)	NCBI

Sequence:

show sequence

TAAGACCTGCTGCCTGGGAGAGGACAGAAACTTCAGGGGCACAAAGGAGCCTGAGACACCATTT
ACCTTCCCAGCCCCATGATTGATGTACCTACTGTGTGCCCAGTGCAGGGAGCATGCTGACGGGG
GTCGGGGTTTGTTGCTGGGATGGGGGCAGTTATAAATCAGGCCGCCCTTCTAAAGTGTTAGAGC
TTCTTAAGCCATTAGAGACCAAATCCCCAGCCCTGTGTTTTGTGCTGAAAGTTGGGGGTACATG
TGTGTGCGTGAGCGCCTATTCCAGCAAGGGGCGGTATGCGGGCACCCAGCTCCCCGGGGAGCTG
GAGCAGGTTGGGAGCTGGGCTCGGGTGGACCAGGCAGGTCAGCGCTTCGGGGCTGCTCCCCGTG
ACAGGCGGCTTCTGTGGCTGCACCGTGGCTTCTGCCTGGATCGCAGGATGTGCGTGAGCCCAGC
TCCTTCCTGTCCTGGGAAGAAGCCTGGAGGGCAGCCGGGAGCAGGTGGTTCTGTGTTTCCTTCT
TGCTCTGGGATCCGCTTCTTCCGAGCCTGCAGGCATCTTAGAAGGTGTTTGGGGACACCTCCGT
CTTCCTGCCGGCACCCAGATTCTTCCTCTTTGAGTTCAGGCCTCGCAAGGAGGGTGTTCCATGC
TATGGGCAGCCGTGGCTCTCTCCCAGGGGCTGGGGCAGGGCTGGCCCCGACTGCAGGTGTGAGC
ACATGTAGCTCTTTCCTGCTTGAAGTGCGACAGTACCTTCCCGTTCCAGCTTGAGCTCCTTTCT
GACCCAAAACAGCTGCCTCTGGGACTTGGTGACTATCAGCCCGTGGCCTCTGGAGCCTGCAGAC
CTGGGTTCAAGTCTTGGCTGTCACTTACCAGTGACTCCATCTTGGCTAGAGACATCCTCTTCCC
GAGCCTCCAGTTTCCTCATCTGGAAAATGGGAATAATACTGCCTAAGGCAGTGCCGATGCGCAG
GGGGGCCCCCCTGCACTCTCTGCTGTCCTCACAGCCATCCTCAGGTTGGGACTGAAGTCAGTCC
TGCTTCATAGATGGCGAAACTGGCAAAGGTTTAAAAAAAACGTTAACAACCTGTCCAGGCAGCT
GAAGTGACGGGATTTGAACCCACGCAGGCTGGCTCAGGAACGCACACACAGCACTGCTTCCCGG
GTGGGCAAGGAGGAAGGGTGCCCCTCGTGGTCCTCAGAGCCCCGCGTGAGGATAGTCGGGTGTC
GGTCACAGATTTTCCTGCCGTGTGCTCCTGACTTCGGGTGCCAGTGTTTTGTAACTGGGTGTGC
TGTCTGGCTGTTTTATACCTGTGACGATGAAGAGGCTCCGGCTCTGTGCGTTGCCAGGGGGTGG
AGACCCAAACAAGGGCAAGGGGTCAGAGGGACTGTCCCCTCCTCGTTTCTGGGGGCTGGGGCAC
TGCAGCCCATCAGGGTCGTGCCACCTCCCCCCAGGCATCGCTGAGACGGGTGCAGAGCCAGGCA
GCCAGGCTCAGCCTCCTCCCCGCGCCCACCTGCCTGGCCCGAGAGCTGGGCCGTCAGCGTCCCT
TTTGTCTTTGCAAACAATTGGGCCGGGAGCTCGGCAGGCCTGACTCAGCGGTCAGTTTTGTCAG
CTCCGGGCTGGCAGCGAGGCCCGGCCGGCCGGTGGCTGGCTGAGGGCACGGAGGGAGCTGGCCC
TGGTGGCTCAGGGTTTGCAAACCCGTTAACTCTCTCTTGCCTGGCGGAACTTTCCCCAGACTTT
CTGGCCCCGATACGCGCCTTGGACAGCTCTAAAGATTCCACAGCCCCGCTTTGGGGCAAGGCTA
CTGCGGAGTCCTCACCTGGCTGGGTCATAGGTGTCGGCGTGGAAAGGTTTGCCGAAGAAGCTTT
ATGCTGCCTGCTTTTGGCTCAGATTCCCTGGCCCCAGCCATCTCTCAGAAGCTGACCGGACCGG
GGTGTTTCTCTCATGTAACTGAACGTGGGCTGAGGTCTGGGTGTGAGAAGGCTTCCTTGGCAGG
TGGCAGGGGGCTTTATCACAGGGGACGGACGACACAGACGTCCTTGGCTGATGGGGCGGGACAG
TCGGCAGCCTGCAGGCAGGAGAGAAAGGCGCGTTCCAGGCAGAGCGTTGGGTCTGGCTTGCAAG
GTGTGTCCTGGTGTCCGGGCTGTCTCTCCCCTGCCAGGAGCTGGGGTCTGTCCTGGGCCTGGCT
GCTCTCAGAGCCCCACCTGGGGTTATTTTTGAAGGGACAGCTGCCTCTGGGCACAGCTTCCCTG
ATCCTGTTCTTAAGGGGGCCTTGCTGGGGGCTCCACACCCATTTACCACAAGCCTCGCTCTGGG
CCAGGCATGGGGCCAGGCCCTGGGGGTCCAGAGGGCAGGACGGGCTCCTGGACTGCGGGGTGGT
AGGCAGGCCTTGTGCTGGAGCAGAGACCCAGGGGCCTGCCTGGGCTTGCGGCCAGTCCCGGACC
TGCTCTCTGGGCTCATCTCCCTGTCCGCGTGGTGGGGACCATGTTGGTGCCACCTCTTTGGCCT
GCCCAGGGACAGTGCATGCCTGTGTGCAGAGGTGGTCAATGGGGGCCTGGCCCTCGAGAAGAGA
GCGGTGTACCCGTGACTCATTTCCCAGCCCCTTGACATGGTCTGTCGCCCCTGCTCCTGTGCCG
GCACCGGGCGAGGGCTCAGCAGGGGATTCTGACACCCTCCTCCCTTCCCCGAGGCCCCCCGCAC
CCTCGCTCTGACCAGCTCTTAGGCAGATCAGCACCCCCGGGACTGACCAGGGCCTGATCGCGTG
CAGCCCCACGTGGCCTCCAGTTTCAGAGATCCCTGCACCCTCTGTGTGAAAGTCCCCAGCGTCA
GGTTGGGACCCGCTGCCCTTGTGTTACTCAGGCCGAGGGGTCTGAGTGCAGCGCCTGTGTCCCC
AGGGCGGGAGGGGGGCTAGAGGGTGACAGGACGCGTCAGTTTGCCCAAAGCACGGAGCACATGG
GGCTCGGTGAATGGAGAGAGCTGTTTCTAGACACTTTCATTCATCAAGTTGTGTACTTATTGAG
TGCCTGCTGTATGCCAGGCCTTGTGCCCGGGGAACTCTGAATAAGAGAGACATGGCCGGGTCTC
CATCTCACTTCTGACGGGGAAGCTAGGCTGTTGAAAGTCCATCTGTGCACGTGAGGGCCCGAGG
CGGGCGCGGGGGCTGCTGGCGGAGGGAGGGCCAGATGGGGCCCGCGGACCTGCCTTGAGATCGT
CGCGGGAGGTGGAGGATTTGCGTGTGAGAGGCAGACTGACACGCCGAAAAACGGTGCAATATTC
AGCCACGGCCTGGGTCCCAGCTCATAGCAAGGTGGAGTGTGGGGCTCCTGGACTGGAAAACACA
TTGGGTTATGAGATGTCACCCCTGGGGACACCGTGGCAGGGCACGTGGGGTCCCTGTACTGTAT
TTGCACTTTCTGGGAATTTTATCATCATTTCCTACTACGACGTCAGTAAAGCCAGGACATCACA
GAGCCCTGAACGGGGGTCGGCGCCGTGGGGGTGGGGCGGCACCTTCGGGGGAGGGGCAGGAAGT
GAGGTCAGAGCTGGAGGCCGTGGGGCTGCGGTGCCCTCCCCGCGTGCCATCACGTGGTTTGTTT
TTACTTTCAGGGTGTCTGGGGTGGCCCTTGCCCCCCTCCCCCCCCACAGTCGCTTCCTGTTTGG
CACTCGCTGGAGCGAGGCGTGGGCCCGCGTGTGGCCCTGCCCGGCGGGCGGCCCGTGCACACCT
GTTGTTTGTCCCCGTCGGCTGCAACAGAAACCAGCCTCTGGGGCGGTTCTTGGGCTCCTGTCCA
AGGATGAGCTGCTGGCCCGGCCCCGCTGGCCCTGGCAGGAGGGGCCCCCCGTGCCCAGGGCCTC
GCCCGGAAGCCTCGGGCCCCAGGGGAGAGGCCGGACCACACTCAGGCTGACACGGGCGTCTGAC
TCGGCCCCAGGGCTCACCCCCCACTACATCTACCCACAAGCCATCGTCCAGCCCAGCGTGGTGA
TCCCGGCCGCCCCGGTCCCGTCGCTGTCCTCGCCCTACATCGAGTACACGCCGGCCAGCCCGGC
CTACGCCCAGTACCCGCCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCCGCCACAGCC
GCCAGCTTCGTGAGCTACGGCTACCCGGCCGCCGTGCCCCAGGCCCTCTCGGCGGCAGCCCCCG
CGGGCACCGCCTTCGTGCAGTACCAGCCTCCGCAGCTGCAGCCGGACAGGATGCAGTGAGGGCC
GCTCCGGCCACCGCAGCCCCGTCACCATGTGCTGGGCGGGCGCTGGCCGAGCCCCGGGGTGCAC
GCCTGCACCTGTGCCTCGGGAGACCCCGCGGGGCCCCGCCTGCACCCCGAACGCCCAGAGACCA
CTTCTCTTTACACCCAGGACCGTCGTGTCTGGAGAGAGGACTTCGAGAGGAAAGAATGCCCGCG
AGCTAGTTGAACATCGGCCAGAACGCGCACACGCCGCCGGCCTCTCCCTTCACCGTCCCCGCCC
TTGCGCCCCCCGGGAGCCCCGGGGCGGTCCCCCCGCATCGGCCGGGCCTTCCAGACCTCCCACA
GATCCCAGCCGCCCTTTGGGGTGAGCAGAAACTTTGTCCCGCTCGGAGAGGCCTTTCCCGCTCG
GAGGGGAGCCCAGAAGCGCGCGGCTCGCTGTCACTCCACCTGCGCGGCGGAACCGGGAACCCGC
GTCAGGGGGAAACGCCACCTCCTGAATTCCCGTTTTCTACGTGATGCCCTGGGGGCGGCTTCCT
GCAGACCACCCCCCGTGGGGCCACCGGCCATCAGCGACCTGCGCCAGGGCAGCCGGCCGAAGTC
CTTTCTGTCAAAGCACTGCGACTTTTTTCTTACCGTCATTGTTTTGCTACTAAGATGATTTCAG
AGTTTCAGTCTATTTTTTCAGTGGAGACTCCCACCACCGAGAATCCAAAACCTGTTTTTTGATG
TTGAGAGACTCACTTCTGTCGATGGCTCCGCCCAAGGGGATAGTGACCGTCCTTCTGTGATCAG
GTGCCCAAGCCCCCGGGGGGTGGCGGCGGGGGGGGGGGCATCTCCAGAGAGTGAGTTGTCTCAA
GCTTGTCCCCCTCTGCACAGCCCGGACGTGATGCTGGCTGCGGGGCCAGACCTTGGTGCAGGAT
GGCCCCCCCACCCCCAGTGTCCCTGCTGCCTGTCAGCCTGAGCCGCAGAATTGAGCTGAGACAC
ATCTGCCTCCCTTGGGGGCCTGGTGGGGAGGGGGAGGTGACAATGCCAACACACTGTGAAGCGG
GGGGAGAGTGAGAGGAGGGCGGTGGCCTGGCAGAGGGGACAGGCTGAGAGCGTTTGGGGGTGGG
GGGCGGGCCAGAAGGTTGGGGGGCGCTGGGGTGTTCCTTCAGACCTACCTCAGGGAAGTGGGAG
GCCTCAGGGCTGACGTATGTGGGCACGCGCTTCATGGCACGCCTGGCGCAGAGTCAAGGCCCAG
AAAATAAAGGTAGCTAATATTATAATATTTTTATTAGAACGTTCTGATTATAAAAATAAAACTT
GTTTTCGTTAAAGAAAAAGTCAGCCTGGCGTTTTTCCCTGGAAGTGGACGCCTCGACCCCCCCG
GCCACCATGGTCGAGTCACGTCCGAGTCAGGGTCCCCCAGCGGAGGGCGGACCCCTCTCAGCAT
CCCCTGTGTGCAGAGCAGGGCCCCGGGGGCGGCGGCTGGGGGAGGGCCTATGTGACTGGCGGCT
CCATCAGAACCCCCTGGACCGGGGGAACTGGGCAGAAGCTGGTTGGAGCTGCAGAGAGGGCAGA
GCAGCAGGTGTCCAGGCTGCCTGCCGTTGGGTGCTGGCTGCCGGCGAGGCTGGAGGTCAGAGTA
AGAAAGGGCCGTCTGGGTCTGGGGGTGAGGGGCTCCAAGGCGGGAGAGTCCCGGCCTCTCCCAC
CGCTCAGCGCTGGGGGCATCCGAGGGCCTCCCGGAGGGGGCATGAAGGCTGGAGGGGAGGTTCC
TCACTCGTTCCCGCAAGCGCTCCCTCATTCGTTCATTCCAAGAAACGTCCTGTGTCGGGTCACA
TGCCAAGCACTGGGGGCAGTCGTAAACAAGACCCACAGTCCTGCCCACTGGGCTTAGCAATCCA
GTGGGCACACAGCATGCCACCGGGTGGGGGAGGGGCAGCACAGGGAAGCGGGGCCTTTCAGACA
CGGGTCAGGACGTGTGACCGGGTGATGAGAATGACCGGGTGCTCGCCAGCGGGAACAGCAGGTG
CAAAGGCCCGGGGACGGGGGGTATGGGACAAGGAGGCCAGAGTGGCTGAAGAAGCCGCACGAGG
GGGACGTGGGCGGGAGACAGGGCTGGGGAGGCAGCAGAGCCTCCGTGGGGGACGTGCTGTGAGC
GCAGTCGGGCAGGGTGGCACGCTCAGCACAGTGTGGTCCATGCCGTGCGGGGGGCAGGGCAGGA
CCGCACACGTGGGAGGAGGCACGGGGGCAGCCGGGTGGAGGGGCTCCTGGGGATCTGGGGGAGT
GGATTCGGTACCCCTGGTGGGGAGGCCAGGCTGAGCAAGGCTTGGAGGTCGTGAGCTGGCCTGC
TTTGGGACAGTTGCTGTCGAGGCTCCACGCTTGTCCTCCCCTGACCTGCAGAGCAGGGCTTGGC
CCCAGGGCGTATGCATCTGCCCCTTTCTCCCTCCACCCCCTGCACAGGGGGTGCAGGGGCGGCC
AGACTCCAGTTTCTCCGGCCCCTCCCTCACCCTCCCTGTAAACTCCTGCTGAGCCTGTTTCCAA
TCTACCCCCTCCTCTGTTCTCAGCCCCGGTCCAGGACCACCCCTCTCTCCTGGACCCTTGCTGC
GGCCCCTTGCTTCTGCCTGCGTGCTCCGGTCCACACTCCATGTGCAACCAGAGGGTCCTGTTGG
GCATCAGTGGGAACATGGCCCTTGCCAGCTCGGAGCCCTCTGTGGCTCCCTGCCATCCTCGAGG
AAAGAGCCCAAGCTGTCCCTGCGGGCAGTGAGACCTCTGCCCACACCAGGCACAGCCCGCTGCG
GGACCTTTGCTCTTGCGGTGGAATCCTCCAGCTTTTACCTGCTGGACTCCAGCCCTCAGCTCAG
AAGTGTCTTTGTCCCCGCAGCCGCCTCTGACCCCAGTCTTGGTCCAGGCAGCTGAGCCCTGTCC
CCCTTCTTCTGTGTCTCCCCTACCCGCCCCCCGCATGGGCATGCCCACTCCAGGGGGCAGGGCC
ATCTGCCTTGTTCCTGCTCTGTCCCCCGCCCCGCAGGGCAACAGCCCCCCTGCATTTGGAACTT
GACGGGGAAAGGGCATCAGAGGTTTCTGGTGGAGGACAGTAGCGGGAGTTTGGGGACCGTCCGT
CCAGGCTGGAGTGAGCTGGGCGGATCGGGGCCGGAAGGCTGGGGGGAGGGACAGCTAGAGGCCA
GAGCTGCTGCAGTGTCCGCAGGGAACGGGACAGAAGTTGCTGAGGGGGAACAAGCCCTGCATGG
AGCTGGGCAGCTGGCTGTGATCCCAGAGTCCACCGATAGCTCCACACGGTCAGCCCTTGGCTTT
GCAGTGAGAAGGGTCACCCTGCGTGGGGAGGTGGCTCCGGTGGGCTGGGGCCACATCCTCAGCC
TGTCCTGAGGTCCTTGTGGGGACCTCCTCCGGCCTTTCCCAGACCCTCTGACTTGCAGATTTGC
TGGTTACCCGTCTGTGGTCCAGGCCTCTGGCCTCTGCGCAGGGAACGCGCAGGGTTCCCGGGTC
AAGTCAGGTGAGATCCTGCCGGGCAGGGTCCCCCTTTTTACCAGGGACGCCCCCAATGCCCCAC
CCCTTGTCCCCTGCCCCCTCCCTCTAGCTGGGTCTTAGTTGGCAAACACTGGCAAGAGGTCAGA
GAGGTCAGCGTGGGGCTCCCGGGCCGGAGGAGGCATTTGCTGCAGCTGATAAGGGCGGGGGGCC
AGGGAGGGGGTTGCGGGTGCTGCCAGGGTTATCTGGAGGGCCACTTGCAGCCAGCCTGTTTCCT
GTCGCTATCGGCCGGTGGCAGCCTCTGGGACAGGCCCGGGGCCTCAAAAACATCCTCCTGGGGC
CCAGGATTGAGGGTCTGGACTGTGGCAAACCCAGGAAAGGGCTTCCACGGTCCGGGCACCGAGT
CGGGGCAGGAGCTAGCGGGGGTGGCAGTGCTGCGGTCTGTGCACGTGGCGCATGACCACTTGTC
CTGGCGGTAATGATTGTAAATGACAGCAGTGAGCACGGCTGCCGGCACCCTAGGGGATCAGGGC
TGTGCAAGCACTTCTTGTGGACGGTCACTTACCCACGAAGGGACCCTTGAGGGCGTCCCCCTTG
CACAGACGGGGAAACTGAGACACGGGAGTGGAGCCACCACTGCCCGGGGCCTCAGGATCGATGT
GGAGGTGAAGGGCGTTGGCCTGACCCGTGGCCCTGGTCCCCCCAGGCCGCCACCTCCCTGAGCC
TCACGGGGAAAGGGGCTGTGACCGTCCTCTAGGGCTGGGGCTGTGTCCCTTCCCCGCTGTGTCC
TCAGCAGACAGTGTACTGAGAATGGGCACGGGTTGGTGAGGATGGGCTGTGGGCACCACCAGCT
CCTCTCTCGTCAGCCCCAGTCCCCGTGTCAGGGAGTCTTGGTCCCATACTCCCAGAGGGCCAGG
CACACACGTGTGCACAGACACACGTACACGTCTGTGTACACATTAACACACACTCTCCCAACAT
ACAGACACATATATGGACACAGACACAGACACGCCCGTGCCCCGCCCCGCAGACATCCACGCTC
ACGGAGGCAGAGACACGGACACACACTCAGCCTCACACGCGCTCCTAGGTGCACAGACGTCTGC
ACACGTACATCTGTATTCTACACGTGGACCCTGACACCCATAAATACGCAGAAACACACCCCCT
GCGCACACATGGACACACACATAAACACGTCTATGCAGACACAGCACACATCTATGCGCTCAGA
CACACACATCCCCTCACACCTGTTACATGACGAGCCCAGAGCCGCCGCCACGGCCTGGGCCCCA
CGCTGAGCAAGGGCCTCGTGCCTCAGCAGCTGCCACGGTTTTGAAGGGGTCACAGTTTTGACTC
TCCAGGACAAGAGAGGTGGGACGCCAGGCAGGCGACGCCTGGTGGGCTGGGACGGCCTGGGCAG
GAAGGAGGCGGTGGCAGGGCCCGCTGGGTGAGGGGGCAGCAGGAGCAGAGTTTCCACGAGTGAA
TGGGCCTTCCCGGGGGGCGGTTCCAGGCCTGCGGGGCAAAGAGACGGAGGAGGGAGCTTTGTGG
TGGGGGCAGCCGGGGAGGGAGGGGTGGCGGGGTTCCCAGGGCCGGGACCTCTGTTAGCCTGGGC
CACGGCCATGGACGCAGGGCATACGTTCCTGCCTGGGTCTGCCTGGCACTCCAGCTGGGGGAGG
CACACGGGGCTCAGAGGGTCCTGAGACCCTGTCCCCGGGACACTGATTTGGAGACCGCCAGCTG
GAGAGGGGCAGAGGCAGGTGACAAGAACATACAGAGGTGCTTCCGTTACCGGTTGGAGCCTCCT
TATCCCACTTTCCAGATGAGCCACCTGAGGCCCAGGGAGAAGAAGGGCTCCTTTGAGGTTGCAG
GGCTGTGGCTCCACCTCTGGGGAGAGATTCTGAAAAGACTGGGCTGGGGCGTGGGCGGGGAGCA
CGGCCACCCAAGTCCACGAGAAGCCGCACAGTGTCACCTCCGCGCTGCCGCCCCAGGCCTGCTC
TACCCCTTTCCCCTGGGATTGGGGGAGAGCGCTTGCTTAGCCCTCATTTTCTCGGAGCCTCAGT
TTCTTTCTGCACAGATGAGATGCCCTGGGTGGCACCTGCAGGAAACTGCCGGGCCAGTGTCCAC
CCCCTTCCTCAGGGAACAGGGCCTGGCACATTCTCCTCCCTGGCCCAGTGCCTAGGTCAGGAAT
AAACATGTAACCCATTGTGAGCCAATGAGCATTAGTCCTGGATTTCTACTGGGACTTTACGGGG
ACGGAAGCTGTCTTTCTGCTGGGGAAGCCAATCTGGGAGCAGATAAGCCTGGAGCT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001098782	(Get FASTA)	NCBI Sequence Viewer
	XP_013840937	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAN13253	(Get FASTA)	NCBI Sequence Viewer
	CAN13254	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000007997
	ENSSSCP00000007997.1
	ENSSSCP00000061347.1
	ENSSSCP00000062191.1
	ENSSSCP00025045832.1
	ENSSSCP00025045853.1
	ENSSSCP00030025273.1
	ENSSSCP00030025283.1
	ENSSSCP00030025288.1
	ENSSSCP00035024206.1
	ENSSSCP00035024213.1
	ENSSSCP00040004738.1
	ENSSSCP00040004745.1
	ENSSSCP00045021993.1
	ENSSSCP00045022013.1
	ENSSSCP00045022033.1
	ENSSSCP00050023099.1
	ENSSSCP00050023104.1
	ENSSSCP00055013832.1
	ENSSSCP00055013849.1
	ENSSSCP00055013870.1
	ENSSSCP00060023252.1
	ENSSSCP00060023254.1
	ENSSSCP00060023255.1
	ENSSSCP00065042398.1
	ENSSSCP00065042400.1
	ENSSSCP00065042406.1
	ENSSSCP00070031008.1
	ENSSSCP00070031010.1

RefSeq Acc Id:

NP_001098782 ⟸ NM_001105312

- UniProtKB:

A5GFN8 (UniProtKB/TrEMBL), A0A4X1UR48 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLLQPAPCAPSAGFPRPPAAPGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAV
VITDRQTGKSRGYGFVTMADRAAAERACKDPNPNIDGRKANVNLAYLGAKPRSLQTGFAIGVQQ
LHPTLIQRTYGLTPHYIYPQAIVQPSVVIPAAPVPSLSSPYIEYTPASPAYAQYPPATYDQYPY
AASPATAASFVSYGYPAAVPQALSAAAPAGTAFVQYQPPQLQPDRMQ

hide sequence

RefSeq Acc Id:	XP_013840937 ⟸ XM_013985483
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1UQI2 (UniProtKB/TrEMBL), A0A8D1HRT3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPLGTPWQGTWGPCTVFALSGNFIIISYYDVSKARTSQSPERGSAPWGWGGTFGGGAGSEVRA GGRGAAVPSPRAITWFVFTFRVSGVALAPLPPHSRFLFGTRWSEAWARVWPCPAGGPCTPVVCP RRLQQKPASGAVLGLLSKDELLARPRWPWQEGPPVPRASPGSLGPQGRGRTTLRLTRASDSAPG LTPHYIYPQAIVQPSVVIPAAPVPSLSSPYIEYTPASPAYAQYPPATYDQYPYAASPATAASFV SYGYPAAVPQALSAAAPAGTAFVQYQPPQLQPDRMQ hide sequence

Ensembl Acc Id:

ENSSSCP00000062191 ⟸ ENSSSCT00000079961

Ensembl Acc Id:

ENSSSCP00000061347 ⟸ ENSSSCT00000077206

Ensembl Acc Id:

ENSSSCP00000007997 ⟸ ENSSSCT00000008216

Protein Domains

RRM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000007504	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025075014	UniProtKB/TrEMBL
	ENSSSCG00030039755	UniProtKB/TrEMBL
	ENSSSCG00035045330	UniProtKB/TrEMBL
	ENSSSCG00040009741	UniProtKB/TrEMBL
	ENSSSCG00045018670	UniProtKB/TrEMBL
	ENSSSCG00050040432	UniProtKB/TrEMBL
	ENSSSCG00055008935	UniProtKB/TrEMBL
	ENSSSCG00060040268	UniProtKB/TrEMBL
	ENSSSCG00065070487	UniProtKB/TrEMBL
	ENSSSCG00070018793	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000008216	ENTREZGENE
	ENSSSCT00000008216.5	UniProtKB/TrEMBL
	ENSSSCT00000077206.2	UniProtKB/TrEMBL
	ENSSSCT00000079961.2	UniProtKB/TrEMBL
	ENSSSCT00025103421.1	UniProtKB/TrEMBL
	ENSSSCT00025103479.1	UniProtKB/TrEMBL
	ENSSSCT00030055340.1	UniProtKB/TrEMBL
	ENSSSCT00030055361.1	UniProtKB/TrEMBL
	ENSSSCT00030055373.1	UniProtKB/TrEMBL
	ENSSSCT00035060218.1	UniProtKB/TrEMBL
	ENSSSCT00035060228.1	UniProtKB/TrEMBL
	ENSSSCT00040012603.1	UniProtKB/TrEMBL
	ENSSSCT00040012625.1	UniProtKB/TrEMBL
	ENSSSCT00045031758.1	UniProtKB/TrEMBL
	ENSSSCT00045031790.1	UniProtKB/TrEMBL
	ENSSSCT00045031811.1	UniProtKB/TrEMBL
	ENSSSCT00050054679.1	UniProtKB/TrEMBL
	ENSSSCT00050054686.1	UniProtKB/TrEMBL
	ENSSSCT00055017493.1	UniProtKB/TrEMBL
	ENSSSCT00055017516.1	UniProtKB/TrEMBL
	ENSSSCT00055017548.1	UniProtKB/TrEMBL
	ENSSSCT00060054523.1	UniProtKB/TrEMBL
	ENSSSCT00060054527.1	UniProtKB/TrEMBL
	ENSSSCT00060054528.1	UniProtKB/TrEMBL
	ENSSSCT00065096819.1	UniProtKB/TrEMBL
	ENSSSCT00065096822.1	UniProtKB/TrEMBL
	ENSSSCT00065096833.1	UniProtKB/TrEMBL
	ENSSSCT00070037077.1	UniProtKB/TrEMBL
	ENSSSCT00070037079.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RNA-binding_reg	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100125973	UniProtKB/TrEMBL
NCBI Gene	RBM38	ENTREZGENE
PANTHER	GEO13361P1-RELATED	UniProtKB/TrEMBL
	RNA-BINDING PROTEIN 38	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A4X1UQI2	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UR48	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QAE2_PIG	UniProtKB/TrEMBL
	A0A5G2QDH9_PIG	UniProtKB/TrEMBL
	A0A8D0WUK9_PIG	UniProtKB/TrEMBL
	A0A8D1HRT3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1Q001_PIG	UniProtKB/TrEMBL
	A0A8D1ZWX3_PIG	UniProtKB/TrEMBL
	A5GFN8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:95666	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD