NRARP (NOTCH regulated ankyrin repeat protein) - Rat Genome Database

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Gene: NRARP (NOTCH regulated ankyrin repeat protein) Sus scrofa
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Symbol: NRARP
Name: NOTCH regulated ankyrin repeat protein
RGD ID: 14160410
Description: INVOLVED IN blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH Adams-Oliver Syndrome 5 (ortholog); autosomal dominant intellectual developmental disorder 8 (ortholog); Brain Neoplasms (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: notch-regulated ankyrin repeat-containing protein
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21314,083,572 - 314,085,376 (+)NCBISscrofa10.2Sscrofa10.2susScr3


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NRARP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21314,083,572 - 314,085,376 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRARP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389137,299,631 - 137,302,271 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9137,299,631 - 137,302,271 (-)EnsemblGRCh38hg38GRCh38
GRCh379140,194,083 - 140,196,723 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369139,314,755 - 139,316,524 (-)NCBINCBI36Build 36hg18NCBI36
Celera9110,710,036 - 110,715,958 (-)NCBICelera
Cytogenetic Map9q34.3NCBI
HuRef9109,653,561 - 109,655,608 (-)NCBIHuRef
CHM1_19140,342,772 - 140,345,437 (-)NCBICHM1_1
T2T-CHM13v2.09149,537,551 - 149,540,191 (-)NCBIT2T-CHM13v2.0
Nrarp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,070,770 - 25,073,351 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl225,070,770 - 25,073,351 (+)EnsemblGRCm39 Ensembl
GRCm38225,180,758 - 25,183,339 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,180,758 - 25,183,339 (+)EnsemblGRCm38mm10GRCm38
MGSCv37225,036,278 - 25,038,859 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36225,003,032 - 25,005,334 (+)NCBIMGSCv36mm8
Celera224,908,545 - 24,911,126 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map217.05NCBI
Nrarp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8328,390,745 - 28,393,299 (+)NCBIGRCr8
mRatBN7.237,992,582 - 7,995,136 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl37,992,552 - 7,995,133 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx311,097,333 - 11,099,887 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0319,683,563 - 19,686,117 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0317,873,405 - 17,875,959 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.032,396,143 - 2,398,697 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,396,143 - 2,398,689 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,377,426 - 2,379,980 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,341,925 - 3,344,479 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera32,819,615 - 2,820,740 (+)NCBICelera
Cytogenetic Map3p13NCBI
NRARP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,097,786 - 2,099,736 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan192,100,144 - 2,102,068 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09108,358,959 - 108,361,586 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19137,331,244 - 137,331,666 (-)NCBIpanpan1.1PanPan1.1panPan2
NRARP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,394,568 - 48,396,849 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,394,754 - 48,395,098 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,581,296 - 47,583,453 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0949,256,163 - 49,258,320 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl949,256,226 - 49,256,570 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1948,032,588 - 48,034,744 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0948,331,296 - 48,333,450 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0948,378,233 - 48,380,389 (+)NCBIUU_Cfam_GSD_1.0
Nrarp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,670,039 - 202,672,233 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936669702,853 - 703,197 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936669702,825 - 705,009 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRARP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112888,636 - 891,269 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12888,998 - 889,342 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660584,417,751 - 4,420,401 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrarp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624760670,837 - 671,181 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624760670,796 - 672,679 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
1 5 3 4 5 5 1 1

Sequence



Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000005844 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015072149 UniProtKB/TrEMBL
  ENSSSCG00025066143 UniProtKB/TrEMBL
  ENSSSCG00030055445 UniProtKB/TrEMBL
  ENSSSCG00035012494 UniProtKB/TrEMBL
  ENSSSCG00040048654 UniProtKB/TrEMBL
  ENSSSCG00045023333 UniProtKB/TrEMBL
  ENSSSCG00050029252 UniProtKB/TrEMBL
  ENSSSCG00055003763 UniProtKB/TrEMBL
  ENSSSCG00060003466 UniProtKB/TrEMBL
  ENSSSCG00065002336 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000006423 ENTREZGENE
  ENSSSCT00000006423.2 UniProtKB/TrEMBL
  ENSSSCT00015096787.1 UniProtKB/TrEMBL
  ENSSSCT00025090774.1 UniProtKB/TrEMBL
  ENSSSCT00030077262.1 UniProtKB/TrEMBL
  ENSSSCT00035015749.1 UniProtKB/TrEMBL
  ENSSSCT00040065558.1 UniProtKB/TrEMBL
  ENSSSCT00045039851.1 UniProtKB/TrEMBL
  ENSSSCT00050039313.1 UniProtKB/TrEMBL
  ENSSSCT00055007384.1 UniProtKB/TrEMBL
  ENSSSCT00060004276.1 UniProtKB/TrEMBL
  ENSSSCT00065002908.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
KEGG Report ssc:100620133 UniProtKB/TrEMBL
NCBI Gene NRARP ENTREZGENE
PANTHER ANKYRIN REPEAT FAMILY PROTEIN UniProtKB/TrEMBL
  NOTCH-REGULATED ANKYRIN REPEAT-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A8D1EU81 ENTREZGENE, UniProtKB/TrEMBL
  F1RVY1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:90889 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-04 NRARP  NOTCH regulated ankyrin repeat protein  NRARP  NOTCH-regulated ankyrin repeat protein  Symbol and/or name change 5135510 APPROVED