JAML (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 45,505,907 - 45,534,863 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 45,506,496 - 45,537,304 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 50,547,537 - 50,576,129 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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JAML (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 118,193,725 - 118,225,011 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 118,193,725 - 118,225,092 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 118,064,440 - 118,095,726 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 117,569,652 - 117,601,019 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 117,569,887 - 117,589,284 | NCBI | | | | | Celera | 11 | 115,222,323 - 115,253,688 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q23.3 | NCBI | | | | | HuRef | 11 | 113,998,029 - 114,029,386 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 117,950,433 - 117,981,803 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 118,210,112 - 118,241,400 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Jaml (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 44,990,451 - 45,019,829 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 44,990,481 - 45,019,832 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 45,079,153 - 45,108,531 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 45,079,183 - 45,108,534 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 44,887,266 - 44,916,614 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 44,830,178 - 44,858,846 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 42,354,372 - 42,384,066 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | A5.2 | NCBI | | | | | cM Map | 9 | 24.84 | NCBI | | | | |
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Jaml (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 8 | 54,281,596 - 54,313,655 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 45,384,836 - 45,415,459 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 45,383,495 - 45,416,565 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 8 | 49,378,644 - 49,408,894 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 49,378,644 - 49,410,088 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 48,005,653 - 48,035,279 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 48,034,107 - 48,058,837 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 8 | 44,971,071 - 45,000,065 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q22 | NCBI | | | | |
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Jaml (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955412 | 19,363,501 - 19,402,213 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JAML (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 118,894,334 - 118,915,480 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 119,999,301 - 120,020,445 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 113,027,829 - 113,062,344 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 116,960,436 - 116,994,373 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 116,960,436 - 116,994,373 (-) | Ensembl | panpan1.1 | | panPan2 | |
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JAML (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 5 | 15,485,378 - 15,513,457 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 15,476,582 - 15,513,075 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 15,536,025 - 15,564,323 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 15,427,439 - 15,455,677 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 15,418,851 - 15,455,673 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 15,565,458 - 15,593,741 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 15,468,979 - 15,497,282 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 15,510,292 - 15,538,609 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Jaml (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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JAML (Chlorocebus sabaeus - green monkey) |
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Jaml (Heterocephalus glaber - naked mole-rat) |
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