NDUFB8 (NADH:ubiquinone oxidoreductase subunit B8) - Rat Genome Database

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Gene: NDUFB8 (NADH:ubiquinone oxidoreductase subunit B8) Sus scrofa
Analyze
Symbol: NDUFB8
Name: NADH:ubiquinone oxidoreductase subunit B8
RGD ID: 14125099
Description: INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (inferred); mitochondrial respiratory chain complex I assembly (inferred); ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); FOUND IN mitochondrial inner membrane (ortholog); INTERACTS WITH cadmium atom; cadmium dichloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14111,626,097 - 111,633,564 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114111,626,827 - 111,633,548 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2463,909,851 - 63,916,428 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:15265077   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NDUFB8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14111,626,097 - 111,633,564 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114111,626,827 - 111,633,548 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2463,909,851 - 63,916,428 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFB8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810100,523,729 - 100,529,923 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10100,523,668 - 100,530,000 (-)EnsemblGRCh38hg38GRCh38
GRCh3710102,283,486 - 102,289,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610102,273,487 - 102,279,626 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410102,273,486 - 102,279,626NCBI
Celera1096,021,344 - 96,027,467 (-)NCBICelera
Cytogenetic Map10q24.31NCBI
HuRef1095,912,314 - 95,918,432 (-)NCBIHuRef
CHM1_110102,568,149 - 102,574,284 (-)NCBICHM1_1
T2T-CHM13v2.010101,406,832 - 101,413,008 (-)NCBIT2T-CHM13v2.0
Ndufb8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391944,537,010 - 44,543,881 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1944,537,011 - 44,543,879 (-)EnsemblGRCm39 Ensembl
GRCm381944,548,571 - 44,555,442 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1944,548,572 - 44,555,440 (-)EnsemblGRCm38mm10GRCm38
MGSCv371944,624,744 - 44,629,905 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361944,603,565 - 44,608,726 (-)NCBIMGSCv36mm8
Celera1945,317,871 - 45,323,032 (-)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1937.98NCBI
Ndufb8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81253,357,878 - 253,362,936 (-)NCBIGRCr8
mRatBN7.21243,408,656 - 243,413,715 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1243,408,619 - 243,413,817 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1251,553,580 - 251,558,636 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01258,254,776 - 258,259,815 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01250,903,779 - 250,908,835 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01264,298,671 - 264,303,712 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1264,298,669 - 264,303,762 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01271,741,836 - 271,746,877 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41249,597,402 - 249,602,443 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11249,857,515 - 249,862,713 (-)NCBI
Celera1239,222,776 - 239,227,817 (-)NCBICelera
Cytogenetic Map1q54NCBI
Ndufb8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554859,607,781 - 9,613,151 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554859,607,781 - 9,613,123 (+)NCBIChiLan1.0ChiLan1.0
NDUFB8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28112,407,560 - 112,419,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110112,412,880 - 112,425,137 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01097,123,826 - 97,129,919 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110100,604,914 - 100,611,016 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10100,604,914 - 100,611,016 (-)Ensemblpanpan1.1panPan2
NDUFB8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12813,249,067 - 13,253,670 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2813,249,070 - 13,253,619 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2813,420,026 - 13,424,630 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02813,718,281 - 13,722,885 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2813,717,817 - 13,722,833 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12813,264,760 - 13,269,366 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02813,306,376 - 13,310,981 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02813,437,377 - 13,441,981 (-)NCBIUU_Cfam_GSD_1.0
Ndufb8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721333,518,864 - 33,523,551 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366005,116,423 - 5,129,334 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366005,122,004 - 5,126,776 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFB8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1993,544,663 - 93,550,748 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl993,544,589 - 93,550,905 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604854,592,819 - 54,598,911 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufb8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624831191,625 - 200,860 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624831195,552 - 200,458 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NDUFB8
225 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000006760   ⟹   ENSSSCP00000006577
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl14111,626,097 - 111,633,564 (-)Ensembl
RefSeq Acc Id: NM_001144842   ⟹   NP_001138314
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.114111,626,827 - 111,633,548 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001138314   ⟸   NM_001144842
- UniProtKB: B8Y651 (UniProtKB/TrEMBL),   A0A4X1U405 (UniProtKB/TrEMBL),   F1RWL7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000006577   ⟸   ENSSSCT00000006760


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000006166 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025054750 UniProtKB/TrEMBL
  ENSSSCG00035036855 UniProtKB/TrEMBL
  ENSSSCG00045015459 UniProtKB/TrEMBL
  ENSSSCG00065056913 UniProtKB/TrEMBL
  ENSSSCG00070013856 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000006760 ENTREZGENE
  ENSSSCT00000006760.5 UniProtKB/TrEMBL
  ENSSSCT00025074978.1 UniProtKB/TrEMBL
  ENSSSCT00035048853.1 UniProtKB/TrEMBL
  ENSSSCT00045026198.1 UniProtKB/TrEMBL
  ENSSSCT00065077917.1 UniProtKB/TrEMBL
  ENSSSCT00070027051.1 UniProtKB/TrEMBL
InterPro NDUFB8 UniProtKB/TrEMBL
  Ndufb8_metazoa UniProtKB/TrEMBL
KEGG Report ssc:448979 UniProtKB/TrEMBL
NCBI Gene NDUFB8 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR12840 UniProtKB/TrEMBL
Pfam NDUF_B8 UniProtKB/TrEMBL
PIRSF NDUB8 UniProtKB/TrEMBL
UniProt A0A4X1U405 ENTREZGENE, UniProtKB/TrEMBL
  B8Y651 ENTREZGENE, UniProtKB/TrEMBL
  F1RWL7 ENTREZGENE, UniProtKB/TrEMBL