SLC25A31 (solute carrier family 25 member 31) - Rat Genome Database

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Gene: SLC25A31 (solute carrier family 25 member 31) Sus scrofa
Analyze
Symbol: SLC25A31
Name: solute carrier family 25 member 31
RGD ID: 14111244
Description: ENCODES a protein that exhibits ATP:ADP antiporter activity (inferred); INVOLVED IN male meiosis I (inferred); mitochondrial ADP transmembrane transport (inferred); mitochondrial ATP transmembrane transport (inferred); ASSOCIATED WITH neuronal ceroid lipofuscinosis 7 (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial permeability transition pore complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ADP/ATP translocase 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl897,095,517 - 97,120,250 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1897,095,503 - 97,120,940 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28103,958,654 - 103,983,983 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
SLC25A31
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl897,095,517 - 97,120,250 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1897,095,503 - 97,120,940 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28103,958,654 - 103,983,983 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384127,730,400 - 127,774,292 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl4127,730,400 - 127,774,292 (+)EnsemblGRCh38hg38GRCh38
GRCh374128,651,555 - 128,695,447 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364128,871,024 - 128,914,897 (+)NCBINCBI36Build 36hg18NCBI36
Celera4126,030,533 - 126,074,415 (+)NCBICelera
Cytogenetic Map4q28.1NCBI
HuRef4124,379,238 - 124,423,119 (+)NCBIHuRef
CHM1_14128,628,022 - 128,671,905 (+)NCBICHM1_1
T2T-CHM13v2.04131,033,425 - 131,077,300 (+)NCBIT2T-CHM13v2.0
Slc25a31
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39340,663,301 - 40,680,525 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl340,663,285 - 40,680,527 (+)EnsemblGRCm39 Ensembl
GRCm38340,708,871 - 40,726,094 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl340,708,855 - 40,726,096 (+)EnsemblGRCm38mm10GRCm38
MGSCv37340,512,793 - 40,530,016 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36340,805,481 - 40,822,142 (+)NCBIMGSCv36mm8
Celera340,438,962 - 40,456,166 (+)NCBICelera
Cytogenetic Map3BNCBI
Slc25a31
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22123,695,387 - 123,711,275 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2123,695,408 - 123,710,795 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.02127,538,323 - 127,554,276 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2127,538,659 - 127,554,307 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02147,143,351 - 147,159,292 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42127,652,328 - 127,667,553 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2118,603,774 - 118,619,883 (+)NCBICelera
Cytogenetic Map2q25NCBI
Slc25a31
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542813,648,699 - 13,667,133 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542813,648,753 - 13,667,133 (-)NCBIChiLan1.0ChiLan1.0
SLC25A31
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14131,200,402 - 131,244,034 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4131,200,402 - 131,243,952 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04119,894,274 - 119,938,168 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC25A31
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11913,164,134 - 13,190,346 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1913,164,245 - 13,276,496 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1913,352,774 - 13,378,984 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01913,254,200 - 13,280,433 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1913,254,307 - 13,280,283 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11913,227,346 - 13,253,552 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01913,512,863 - 13,539,135 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01913,974,826 - 14,001,040 (-)NCBIUU_Cfam_GSD_1.0
Slc25a31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530161,628,301 - 61,652,793 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366422,921,629 - 2,945,577 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A31
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1774,857,296 - 74,892,873 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl774,857,818 - 74,892,156 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603753,991,729 - 54,027,399 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a31
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247778,676,083 - 8,700,281 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247778,676,933 - 8,700,198 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system nervous system
High
Medium
Low
Below cutoff 1 1 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003129207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSSCT00000009944   ⟹   ENSSSCP00000009688
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl897,095,517 - 97,120,250 (-)Ensembl
RefSeq Acc Id: XM_003129207   ⟹   XP_003129255
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1897,095,503 - 97,120,940 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003129255 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003129255   ⟸   XM_003129207
- UniProtKB: F1RRA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000009688   ⟸   ENSSSCT00000009944


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000009078 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000009688 ENTREZGENE
  ENSSSCP00000009688.4 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000009944 ENTREZGENE
  ENSSSCT00000009944.4 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Aden_trnslctor UniProtKB/TrEMBL
  Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
KEGG Report ssc:100518564 UniProtKB/TrEMBL
NCBI Gene SLC25A31 ENTREZGENE
PANTHER PTHR45635 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS ADPTRNSLCASE UniProtKB/TrEMBL
  MITOCARRIER UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt F1RRA6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:93008 ENTREZGENE