NGDN (Sus scrofa - pig) |
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NGDN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 23,469,703 - 23,478,826 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 23,469,679 - 23,509,862 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 23,938,912 - 23,948,035 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 23,008,738 - 23,017,242 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 23,008,755 - 23,017,853 | NCBI | | | | | Celera | 14 | 3,801,578 - 3,810,079 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q11.2 | NCBI | | | | | HuRef | 14 | 4,055,311 - 4,063,812 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 23,937,565 - 23,946,068 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 17,670,297 - 17,679,414 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ngdn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 14 | 55,252,911 - 55,261,595 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 55,252,911 - 55,261,594 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 55,015,454 - 55,024,138 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 55,015,454 - 55,024,137 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 55,634,291 - 55,642,975 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 53,969,596 - 53,978,209 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 52,821,923 - 52,830,481 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | C3 | NCBI | | | | | cM Map | 14 | 28.03 | NCBI | | | | |
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Ngdn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 15 | 32,459,898 - 32,467,260 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 28,489,950 - 28,497,286 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 28,490,040 - 28,519,654 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 15 | 30,335,757 - 30,343,003 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 31,482,954 - 31,490,200 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 29,725,617 - 29,732,863 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 33,677,333 - 33,684,840 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 33,677,597 - 33,684,840 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 37,564,770 - 37,571,979 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 33,123,040 - 33,130,280 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 15 | 33,139,359 - 33,145,777 (+) | NCBI | | | | | Celera | 15 | 28,068,294 - 28,075,327 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | p13 | NCBI | | | | |
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Ngdn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955409 | 36,877,343 - 36,887,031 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 36,877,343 - 36,887,031 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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NGDN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 24,900,885 - 24,909,229 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 24,117,377 - 24,125,720 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 4,288,325 - 4,296,671 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 22,382,340 - 22,390,718 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 22,382,334 - 22,390,718 (+) | Ensembl | panpan1.1 | | panPan2 | |
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NGDN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 3,704,430 - 3,713,517 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 3,705,005 - 3,713,517 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 3,626,408 - 3,635,526 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 3,814,513 - 3,823,622 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 3,815,156 - 3,823,622 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 3,506,015 - 3,515,129 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 3,567,476 - 3,576,588 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 3,829,536 - 3,838,646 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ngdn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NGDN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 29 | 23,840,583 - 23,848,726 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 29 | 23,840,639 - 23,849,653 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666059 | 22,569,926 - 22,578,108 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ngdn (Heterocephalus glaber - naked mole-rat) |
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