COIL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 12 | 33,234,437 - 33,254,342 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 33,231,842 - 33,254,357 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 34,038,175 - 34,061,197 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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COIL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 17 | 56,938,199 - 56,961,050 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 56,938,199 - 56,961,050 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 55,015,560 - 55,038,411 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 52,370,559 - 52,393,410 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 52,370,561 - 52,393,410 | NCBI | | | | | Celera | 17 | 51,477,125 - 51,499,976 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q22 | NCBI | | | | | HuRef | 17 | 50,376,180 - 50,399,432 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 55,080,769 - 55,103,619 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 57,815,838 - 57,838,690 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Coil (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 11 | 88,864,761 - 88,882,439 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 88,861,078 - 88,882,439 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 88,973,935 - 88,991,613 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 88,970,252 - 88,991,613 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 88,835,249 - 88,852,927 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 88,790,040 - 88,807,703 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 98,590,249 - 98,608,066 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | C | NCBI | | | | | cM Map | 11 | 54.34 | NCBI | | | | |
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Coil (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 10 | 74,286,279 - 74,307,597 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 73,789,077 - 73,810,378 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 73,789,488 - 73,810,393 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 78,412,522 - 78,427,977 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 77,917,447 - 77,932,904 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 73,380,611 - 73,396,068 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 76,320,676 - 76,336,169 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 76,320,041 - 76,341,418 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 73,772,233 - 73,792,449 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 77,435,834 - 77,452,170 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 77,450,203 - 77,466,538 (+) | NCBI | | | | | Celera | 10 | 72,695,262 - 72,710,398 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26 | NCBI | | | | |
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Coil (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955451 | 5,884,233 - 5,898,525 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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COIL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 19 | 73,111,130 - 73,134,002 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 77,922,063 - 77,944,941 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 51,015,403 - 51,038,276 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 55,876,226 - 55,898,862 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 55,877,098 - 55,898,827 (-) | Ensembl | panpan1.1 | | panPan2 | |
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COIL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 31,745,456 - 31,762,289 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 31,746,137 - 31,762,270 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 30,985,202 - 31,001,963 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 32,553,135 - 32,569,904 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 32,553,135 - 32,569,893 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 31,338,241 - 31,341,654 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 31,622,461 - 31,639,220 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 31,705,861 - 31,722,626 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Coil (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 31,106,367 - 31,124,937 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936490 | 5,950,034 - 5,962,095 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936490 | 5,950,215 - 5,968,772 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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COIL (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 16 | 36,450,064 - 36,473,294 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 36,450,102 - 36,469,493 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 7,269,233 - 7,292,676 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Coil (Heterocephalus glaber - naked mole-rat) |
|