GGT7 (gamma-glutamyltransferase 7) - Rat Genome Database

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Advanced Search (OLGA)
Gene: GGT7 (gamma-glutamyltransferase 7) Sus scrofa
Analyze
Symbol: GGT7
Name: gamma-glutamyltransferase 7
RGD ID: 14063891
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); glutathione hydrolase activity (inferred); hydrolase activity (inferred); INVOLVED IN glutathione catabolic process (inferred); glutathione metabolic process (inferred); negative regulation of response to oxidative stress (inferred); ASSOCIATED WITH glutathione synthetase deficiency (ortholog); glutatione synthetase deficiency with 5-oxoprolinuria (ortholog); long QT syndrome (ortholog); FOUND IN plasma membrane (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,231,084 - 38,255,884 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11738,231,083 - 38,255,915 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21743,403,290 - 43,427,939 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
GGT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,231,084 - 38,255,884 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11738,231,083 - 38,255,915 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21743,403,290 - 43,427,939 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GGT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382034,844,720 - 34,872,856 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2034,844,720 - 34,872,856 (-)EnsemblGRCh38hg38GRCh38
GRCh372033,432,523 - 33,460,659 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362032,896,184 - 32,924,322 (-)NCBINCBI36Build 36hg18NCBI36
Build 342032,896,183 - 32,924,318NCBI
Celera2030,181,619 - 30,209,755 (-)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,216,219 - 30,239,077 (-)NCBIHuRef
CHM1_12033,333,913 - 33,362,031 (-)NCBICHM1_1
T2T-CHM13v2.02036,565,362 - 36,593,497 (-)NCBIT2T-CHM13v2.0
Ggt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,332,299 - 155,356,921 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,332,299 - 155,360,157 (-)EnsemblGRCm39 Ensembl
GRCm382155,490,379 - 155,514,891 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2155,490,379 - 155,518,237 (-)EnsemblGRCm38mm10GRCm38
MGSCv372155,316,116 - 155,340,582 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362155,181,826 - 155,206,268 (-)NCBIMGSCv36mm8
Celera2161,422,733 - 161,447,077 (-)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
Ggt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,438,240 - 164,464,059 (-)NCBIGRCr8
mRatBN7.23143,978,073 - 144,004,597 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3147,844,521 - 147,867,911 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,461,796 - 156,485,186 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,201,330 - 154,224,718 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,005,960 - 151,029,941 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,006,531 - 151,032,302 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03157,373,960 - 157,400,349 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43145,987,531 - 146,010,922 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13145,893,154 - 145,916,527 (-)NCBI
Celera3142,702,677 - 142,726,067 (-)NCBICelera
Cytogenetic Map3q42NCBI
Ggt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542226,502,463 - 26,530,416 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542226,503,755 - 26,529,363 (+)NCBIChiLan1.0ChiLan1.0
GGT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22140,577,681 - 40,605,927 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12040,561,915 - 40,598,999 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,173,216 - 31,201,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12032,298,084 - 32,325,869 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2032,298,699 - 32,325,869 (-)Ensemblpanpan1.1panPan2
GGT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12423,900,842 - 23,924,555 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2423,901,045 - 23,997,286 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2423,546,999 - 23,570,714 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02424,592,227 - 24,616,376 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2424,591,554 - 24,616,447 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12423,880,017 - 23,903,731 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02423,974,877 - 23,999,003 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02424,413,600 - 24,437,711 (-)NCBIUU_Cfam_GSD_1.0
Ggt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640172,863,214 - 172,903,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,845,943 - 5,872,183 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1239,148,771 - 39,177,730 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl239,148,131 - 39,177,691 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605087,637,179 - 87,683,844 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248424,526,536 - 4,554,253 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248424,526,618 - 4,551,644 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GGT7
514 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000007970   ⟹   ENSSSCP00000007757
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1738,231,084 - 38,255,884 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000082179   ⟹   ENSSSCP00000070814
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1738,241,973 - 38,255,879 (-)Ensembl
RefSeq Acc Id: XM_003134405   ⟹   XP_003134453
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11738,231,086 - 38,255,914 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013985303   ⟹   XP_013840757
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11738,231,083 - 38,255,915 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013985304   ⟹   XP_013840758
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11738,231,084 - 38,255,915 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077550   ⟹   XP_020933209
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11738,231,084 - 38,255,914 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013840757   ⟸   XM_013985303
- Peptide Label: isoform X2
- UniProtKB: A0A8D0Q2X4 (UniProtKB/TrEMBL),   A0A8D1FAZ0 (UniProtKB/TrEMBL),   A0A8D1H6K4 (UniProtKB/TrEMBL),   A0A8D0I447 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013840758   ⟸   XM_013985304
- Peptide Label: isoform X3
- UniProtKB: A0A8D1FAZ0 (UniProtKB/TrEMBL),   A0A8D1H6K4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020933209   ⟸   XM_021077550
- Peptide Label: isoform X4
- UniProtKB: A0A8D0PX93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003134453   ⟸   XM_003134405
- Peptide Label: isoform X1
- UniProtKB: F1S4Y1 (UniProtKB/TrEMBL),   A0A4X1T5T3 (UniProtKB/TrEMBL),   A0A8D0I3K0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000007757   ⟸   ENSSSCT00000007970
Ensembl Acc Id: ENSSSCP00000070814   ⟸   ENSSSCT00000082179


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000007285 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015072785 UniProtKB/TrEMBL
  ENSSSCG00025048293 UniProtKB/TrEMBL
  ENSSSCG00030024763 UniProtKB/TrEMBL
  ENSSSCG00035062602 UniProtKB/TrEMBL
  ENSSSCG00040055261 UniProtKB/TrEMBL
  ENSSSCG00045012321 UniProtKB/TrEMBL
  ENSSSCG00050039462 UniProtKB/TrEMBL
  ENSSSCG00055018122 UniProtKB/TrEMBL
  ENSSSCG00060076507 UniProtKB/TrEMBL
  ENSSSCG00065047527 UniProtKB/TrEMBL
  ENSSSCG00070006788 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000007970 ENTREZGENE
  ENSSSCT00000007970.5 UniProtKB/TrEMBL
  ENSSSCT00015097687.1 UniProtKB/TrEMBL
  ENSSSCT00015097928.1 UniProtKB/TrEMBL
  ENSSSCT00015098048.1 UniProtKB/TrEMBL
  ENSSSCT00015098139.1 UniProtKB/TrEMBL
  ENSSSCT00025065725.1 UniProtKB/TrEMBL
  ENSSSCT00025065939.1 UniProtKB/TrEMBL
  ENSSSCT00025066082.1 UniProtKB/TrEMBL
  ENSSSCT00030034573.1 UniProtKB/TrEMBL
  ENSSSCT00030034588.1 UniProtKB/TrEMBL
  ENSSSCT00030034594.1 UniProtKB/TrEMBL
  ENSSSCT00030034602.1 UniProtKB/TrEMBL
  ENSSSCT00035084120.1 UniProtKB/TrEMBL
  ENSSSCT00035084125.1 UniProtKB/TrEMBL
  ENSSSCT00035084130.1 UniProtKB/TrEMBL
  ENSSSCT00040074896.1 UniProtKB/TrEMBL
  ENSSSCT00040075057.1 UniProtKB/TrEMBL
  ENSSSCT00040075179.1 UniProtKB/TrEMBL
  ENSSSCT00045020956.1 UniProtKB/TrEMBL
  ENSSSCT00045021003.1 UniProtKB/TrEMBL
  ENSSSCT00045021035.1 UniProtKB/TrEMBL
  ENSSSCT00050053238.1 UniProtKB/TrEMBL
  ENSSSCT00050053245.1 UniProtKB/TrEMBL
  ENSSSCT00050053251.1 UniProtKB/TrEMBL
  ENSSSCT00055035488.1 UniProtKB/TrEMBL
  ENSSSCT00055035607.1 UniProtKB/TrEMBL
  ENSSSCT00055035714.1 UniProtKB/TrEMBL
  ENSSSCT00060104968.1 UniProtKB/TrEMBL
  ENSSSCT00060105012.1 UniProtKB/TrEMBL
  ENSSSCT00060105061.1 UniProtKB/TrEMBL
  ENSSSCT00065065044.1 UniProtKB/TrEMBL
  ENSSSCT00065065062.1 UniProtKB/TrEMBL
  ENSSSCT00065065066.1 UniProtKB/TrEMBL
  ENSSSCT00070013044.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.246.130 UniProtKB/TrEMBL
  3.60.20.40 UniProtKB/TrEMBL
InterPro GGT_lsub_C UniProtKB/TrEMBL
  GGT_peptidase UniProtKB/TrEMBL
  GGT_ssub UniProtKB/TrEMBL
  Ntn_hydrolases_N UniProtKB/TrEMBL
KEGG Report ssc:100519401 UniProtKB/TrEMBL
NCBI Gene GGT7 ENTREZGENE
PANTHER GLUTATHIONE HYDROLASE 7 UniProtKB/TrEMBL
  PTHR11686 UniProtKB/TrEMBL
Pfam G_glu_transpept UniProtKB/TrEMBL
PRINTS GGTRANSPTASE UniProtKB/TrEMBL
Superfamily-SCOP SSF56235 UniProtKB/TrEMBL
UniProt A0A4X1T5T3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0I3K0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0I447 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0I4C7_PIG UniProtKB/TrEMBL
  A0A8D0PX93 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0Q2X4 ENTREZGENE
  A0A8D0W6L3_PIG UniProtKB/TrEMBL
  A0A8D1C3N1_PIG UniProtKB/TrEMBL
  A0A8D1FAZ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1H6K4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1H6Z8_PIG UniProtKB/TrEMBL
  A0A8D1MGI7_PIG UniProtKB/TrEMBL
  F1S4Y1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96321 ENTREZGENE