Ggt7 (gamma-glutamyltransferase 7) - Rat Genome Database

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Gene: Ggt7 (gamma-glutamyltransferase 7) Ictidomys tridecemlineatus
Analyze
Symbol: Ggt7
Name: gamma-glutamyltransferase 7
RGD ID: 12466413
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); glutathione hydrolase activity (inferred); hydrolase activity (inferred); INVOLVED IN glutathione biosynthetic process (inferred); glutathione catabolic process (inferred); glutathione metabolic process (inferred); ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: gamma-glutamyltransferase 7, transcript variant X1; gamma-glutamyltransferase 7, transcript variant X2; glutathione hydrolase 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640172,863,214 - 172,903,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,845,943 - 5,872,183 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ggt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640172,863,214 - 172,903,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,845,943 - 5,872,183 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382034,844,720 - 34,872,856 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2034,844,720 - 34,872,856 (-)EnsemblGRCh38hg38GRCh38
GRCh372033,432,523 - 33,460,659 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362032,896,184 - 32,924,322 (-)NCBINCBI36Build 36hg18NCBI36
Build 342032,896,183 - 32,924,318NCBI
Celera2030,181,619 - 30,209,755 (-)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,216,219 - 30,239,077 (-)NCBIHuRef
CHM1_12033,333,913 - 33,362,031 (-)NCBICHM1_1
T2T-CHM13v2.02036,565,362 - 36,593,497 (-)NCBIT2T-CHM13v2.0
Ggt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,332,299 - 155,356,921 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,332,299 - 155,360,157 (-)EnsemblGRCm39 Ensembl
GRCm382155,490,379 - 155,514,891 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2155,490,379 - 155,518,237 (-)EnsemblGRCm38mm10GRCm38
MGSCv372155,316,116 - 155,340,582 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362155,181,826 - 155,206,268 (-)NCBIMGSCv36mm8
Celera2161,422,733 - 161,447,077 (-)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
Ggt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,438,240 - 164,464,059 (-)NCBIGRCr8
mRatBN7.23143,978,073 - 144,004,597 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3147,844,521 - 147,867,911 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,461,796 - 156,485,186 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,201,330 - 154,224,718 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,005,960 - 151,029,941 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,006,531 - 151,032,302 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03157,373,960 - 157,400,349 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43145,987,531 - 146,010,922 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13145,893,154 - 145,916,527 (-)NCBI
Celera3142,702,677 - 142,726,067 (-)NCBICelera
Cytogenetic Map3q42NCBI
Ggt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542226,502,463 - 26,530,416 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542226,503,755 - 26,529,363 (+)NCBIChiLan1.0ChiLan1.0
GGT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22140,577,681 - 40,605,927 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12040,561,915 - 40,598,999 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,173,216 - 31,201,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12032,298,084 - 32,325,869 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2032,298,699 - 32,325,869 (-)Ensemblpanpan1.1panPan2
GGT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12423,900,842 - 23,924,555 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2423,901,045 - 23,997,286 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2423,546,999 - 23,570,714 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02424,592,227 - 24,616,376 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2424,591,554 - 24,616,447 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12423,880,017 - 23,903,731 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02423,974,877 - 23,999,003 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02424,413,600 - 24,437,711 (-)NCBIUU_Cfam_GSD_1.0
GGT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,231,084 - 38,255,884 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11738,231,083 - 38,255,915 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21743,403,290 - 43,427,939 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GGT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1239,148,771 - 39,177,730 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl239,148,131 - 39,177,691 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605087,637,179 - 87,683,844 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248424,526,536 - 4,554,253 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248424,526,618 - 4,551,644 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000011605   ⟹   ENSSTOP00000010416
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365615,845,943 - 5,872,183 (+)Ensembl
RefSeq Acc Id: XM_005329904   ⟹   XP_005329961
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640172,878,734 - 172,903,326 (-)NCBI
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729572   ⟹   XP_021585247
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640172,878,734 - 172,903,326 (-)NCBI
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040274244   ⟹   XP_040130178
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640172,863,214 - 172,903,327 (-)NCBI
RefSeq Acc Id: XM_040274245   ⟹   XP_040130179
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640172,878,734 - 172,893,965 (-)NCBI
RefSeq Acc Id: XR_005729017
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640172,879,406 - 172,903,327 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005329961 (Get FASTA)   NCBI Sequence Viewer  
  XP_021585247 (Get FASTA)   NCBI Sequence Viewer  
  XP_040130178 (Get FASTA)   NCBI Sequence Viewer  
  XP_040130179 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000010416.3
GenBank Protein KAG3263127 (Get FASTA)   NCBI Sequence Viewer  
  KAG3263128 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005329961   ⟸   XM_005329904
- Peptide Label: isoform X1
- UniProtKB: I3MHN3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021585247   ⟸   XM_021729572
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_040130178   ⟸   XM_040274244
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040130179   ⟸   XM_040274245
- Peptide Label: isoform X4
RefSeq Acc Id: ENSSTOP00000010416   ⟸   ENSSTOT00000011605


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000011584 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000011605.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.246.130 UniProtKB/TrEMBL
  3.60.20.40 UniProtKB/TrEMBL
InterPro GGT_lsub_C UniProtKB/TrEMBL
  GGT_peptidase UniProtKB/TrEMBL
  GGT_ssub UniProtKB/TrEMBL
  Ntn_hydrolases_N UniProtKB/TrEMBL
NCBI Gene Ggt7 ENTREZGENE
PANTHER GLUTATHIONE HYDROLASE 7 UniProtKB/TrEMBL
  PTHR11686 UniProtKB/TrEMBL
Pfam G_glu_transpept UniProtKB/TrEMBL
PRINTS GGTRANSPTASE UniProtKB/TrEMBL
Superfamily-SCOP SSF56235 UniProtKB/TrEMBL
UniProt I3MHN3 ENTREZGENE, UniProtKB/TrEMBL