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Gene: RAB2B (RAB2B, member RAS oncogene family) Sus scrofa

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Symbol:

RAB2B

Name:

RAB2B, member RAS oncogene family (Ensembl:RAB2B, member RAS onco family)

RGD ID:

14049869

Description:

ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); INVOLVED IN defense response to virus (inferred); Golgi organization (inferred); innate immune response (inferred); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); cone-rod dystrophy 13 (ortholog); purine nucleoside phosphorylase deficiency (ortholog); FOUND IN presynapse (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ras-related protein Rab-2B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	77,689,551 - 77,716,772 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	77,698,907 - 77,717,211 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	83,040,992 - 83,059,019 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RAB2B	Pig	Brain-Lung-Thyroid Syndrome		ISO	RAB2B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Brain-lung-thyroid syndrome	ClinVar	PMID:25741868
RAB2B	Pig	cone-rod dystrophy 13		ISO	RAB2B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cone-rod dystrophy 13	ClinVar	PMID:11528500 more ...
RAB2B	Pig	purine nucleoside phosphorylase deficiency		ISO	RAB2B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Purine-nucleoside phosphorylase deficiency	ClinVar	PMID:24767876 and PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RAB2B	Pig	deoxynivalenol	increases expression	EXP		6480464	deoxynivalenol results in increased expression of RAB2B mRNA	CTD	PMID:35307453

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RAB2B	Pig	defense response to virus	involved_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	Golgi organization	involved_in	IEA	UniProtKB:Q8WUD1 and ensembl:ENSP00000380869	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	innate immune response	involved_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	macroautophagy	involved_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	positive regulation of exocytosis	involved_in	IBA	PANTHER:PTN008725064 and UniProtKB:Q8WUD1	150520179		GO_Central	GO_REF:0000033
RAB2B	Pig	positive regulation of exocytosis	involved_in	IEA	UniProtKB:Q8WUD1 and ensembl:ENSP00000380869	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	positive regulation of type I interferon production	involved_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	vesicle-mediated transport	involved_in	IBA	FB:FBgn0014009 more ...	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RAB2B	Pig	acrosomal vesicle	located_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	autophagosome membrane	located_in	IEA	UniProtKB:P59279 and ensembl:ENSMUSP00000022765	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	Golgi apparatus	is_active_in	IBA	FB:FBgn0014009 more ...	150520179		GO_Central	GO_REF:0000033
RAB2B	Pig	Golgi apparatus	located_in	IEA	UniProtKB:P59279 more ...	150520179		Ensembl	GO_REF:0000107
RAB2B	Pig	Golgi membrane	is_active_in	IBA	PANTHER:PTN008725055 more ...	150520179		GO_Central	GO_REF:0000033
RAB2B	Pig	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
RAB2B	Pig	presynapse	located_in	ISO	Rab2b (Rattus norvegicus)	9068941	PMID:20926670	ARUK-UCL	PMID:20926670 and REF_RGD_ID:13432355

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RAB2B	Pig	GTP binding	enables	IBA	FB:FBgn0014009 more ...	150520179		GO_Central	GO_REF:0000033
RAB2B	Pig	GTP binding	enables	IEA	UniProtKB-KW:KW-0342	150520179		UniProt	GO_REF:0000043
RAB2B	Pig	GTP binding	enables	IEA	InterPro:IPR001806 and InterPro:IPR005225	150520179		InterPro	GO_REF:0000002
RAB2B	Pig	GTPase activity	enables	IEA	InterPro:IPR001806	150520179		InterPro	GO_REF:0000002
RAB2B	Pig	GTPase activity	enables	IBA	FB:FBgn0015790 more ...	150520179		GO_Central	GO_REF:0000033
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:Q3UZD7	9068941	PMID:34714330	UniProt	PMID:34714330
RAB2B	Pig	protein binding	enables	ISO	PR:Q5STT6	9068941	PMID:38935810	MGI	PMID:38935810
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:P50395	9068941	PMID:35271311	IntAct	PMID:35271311
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:P50395 and UniProtKB:Q8IWE2	9068941	PMID:33961781	IntAct	PMID:33961781
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:B2RXB0 and UniProtKB:Q5STT6	9068941	PMID:18256213	UniProt	PMID:18256213
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:Q6NXP2-2	9068941	PMID:28514442	IntAct	PMID:28514442
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:Q05084 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:O00291 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:O60806 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:Q05084	9068941	PMID:29892012	IntAct	PMID:29892012
RAB2B	Pig	protein binding	enables	ISO	UniProtKB:Q8IYT1	9068941	PMID:26209634	UniProt	PMID:26209634

PMID:22301074	PMID:30032202

RAB2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	77,689,551 - 77,716,772 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	77,698,907 - 77,717,211 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	83,040,992 - 83,059,019 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	21,459,020 - 21,476,959 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	21,459,020 - 21,476,960 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	21,927,179 - 21,945,118 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	20,997,023 - 21,014,961 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	20,997,027 - 21,014,961	NCBI
Celera	14	1,792,578 - 1,810,513 (-)	NCBI		Celera
Cytogenetic Map	14	q11.2	NCBI
HuRef	14	2,046,741 - 2,064,378 (-)	NCBI		HuRef
CHM1_1	14	21,928,654 - 21,946,603 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	15,656,403 - 15,674,328 (-)	NCBI		T2T-CHM13v2.0

Rab2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	52,499,216 - 52,516,852 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	52,499,216 - 52,517,002 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	52,261,759 - 52,279,395 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	52,261,759 - 52,279,545 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	52,881,434 - 52,899,070 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	51,183,722 - 51,201,280 (-)	NCBI		MGSCv36	mm8
Celera	14	49,244,192 - 49,261,935 (-)	NCBI		Celera
Cytogenetic Map	14	C2	NCBI
cM Map	14	26.87	NCBI

Rab2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	27,441,860 - 27,462,479 (-)	NCBI		GRCr8
mRatBN7.2	15	24,968,364 - 24,988,990 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	24,968,803 - 24,989,113 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	27,742,428 - 27,761,686 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	28,696,681 - 28,715,783 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	26,949,627 - 26,968,722 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	28,675,504 - 28,696,192 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	28,677,055 - 28,696,122 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	32,485,704 - 32,506,397 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	27,708,937 - 27,729,229 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	27,724,998 - 27,744,664 (-)	NCBI
Celera	15	25,273,808 - 25,293,145 (-)	NCBI		Celera
Cytogenetic Map	15	p14	NCBI

Rab2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955550	2,180,326 - 2,195,523 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955550	2,180,326 - 2,195,523 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	22,914,464 - 22,932,434 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	22,130,951 - 22,148,921 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	2,276,798 - 2,294,730 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	20,353,701 - 20,371,629 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	20,353,701 - 20,371,629 (-)	Ensembl	panpan1.1		panPan2

RAB2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	18,494,417 - 18,512,144 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	18,495,891 - 18,512,030 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	18,978,908 - 18,996,652 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	18,753,341 - 18,771,113 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	18,753,342 - 18,771,002 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	18,435,482 - 18,453,188 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	18,491,516 - 18,509,245 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	18,620,377 - 18,638,114 (-)	NCBI		UU_Cfam_GSD_1.0

Rab2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	32,701,507 - 32,718,815 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936880	610,878 - 628,753 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936880	610,903 - 628,176 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	21,927,529 - 21,946,206 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	21,927,107 - 21,946,012 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	24,484,242 - 24,503,031 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624825	7,478,151 - 7,493,649 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624825	7,477,729 - 7,493,669 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in RAB2B
347 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	XM_013978245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013978246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK344438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU695044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP340603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01117357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000027841 ⟹ ENSSSCP00000024266

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	77,689,551 - 77,716,761 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000048308 ⟹ ENSSSCP00000038177

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	77,699,219 - 77,716,772 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000086323 ⟹ ENSSSCP00000060945

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	77,699,219 - 77,716,759 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000086920 ⟹ ENSSSCP00000060638

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	77,689,551 - 77,713,867 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000095496 ⟹ ENSSSCP00000078717

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	77,689,551 - 77,714,100 (+)	Ensembl

RefSeq Acc Id:

XM_013978245 ⟹ XP_013833699

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	77,698,907 - 77,717,211 (+)	NCBI

Sequence:

show sequence

ACTTCCGCAACGACGTGCGTGGCTCTCAGCTGACTGGAAGGAGCGCCGTGGGGCTGTTGTGAGTCAGGCCCGGGAAAGCCGAGCGGACTGAAAGGCTAGCTATCGCCCCCTGGATCTTGGTGGTATTA
TGGCATGTAGAAGTGTTGGAGGCGCCGCCGGAGGTGGTATCTGGGTATTACCGTCGCTCCGACTGAAAGAGGATTTCGAGGGAGAGCAATAGAGACGTGATCTGGGCTAGAAGGGACCGGAGGTCCGT
AGATTGCGTGGCTAGAGAGGCCGGAGGTAAGTGGCTGTAGAAGTCGGGCGGACCCGGAATCCAGAGGAAACGGGACCATGACTTATGCTTATCTCTTCAAGTACATCATCATCGGGGACACAGGTGTG
GGGAAGTCATGTCTCCTCCTGCAGTTTACAGACAAGCGGTTCCAGCCGGTCCACGACCTCACAATAGGTGTGGAATTTGGGGCGCGTATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTG
GGACACGGCTGGGCAAGAATCCTTCCGTTCTATCACCCGTTCATACTACAGGGGAGCAGCGGGAGCACTGCTGGTGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCATGGTTAGAGG
ATGCCCGGCAGCACTCTAGCTCCAACATGGTTATCATGCTGATTGGGAATAAGAGTGACCTAGAGTCCCGTAGGGATGTGAAGAGAGAAGAGGGAGAGGCCTTTGCTCGGGAACATGGACTTATATTC
ATGGAAACTTCGGCCAAAACAGCCTGCAATGTTGAAGAGGCCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTTCACAATGAGGCAAATGGCATCAAGATTGG
CCCCCAGCAGTGTATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAGCACTCGTGACATGGGATCTGACTCTGGCTGCTGCTGAACATCTGGCCTGGACTTTTTTTTCCTTCCTGGAACAGCTT
CAAATCAATAGGCTTAAAGAAAGAGGTCTTACTTGCTTTGGCTGAGAAAAGCCTCTTTTCAAGGTGTGATATTTTGCCTTTCCACTTAAAGACCAGGGGAGAATTTGGGCCCTCATCCTCCTGTTTTA
ATTTCTAAAGTGTTAGGATCAAAGCTGATTGTCATGGTAGTTCAAAAATAAATTCTTTTATAAGCATACACAATCTACTCCCCACCAAGAATTAGTAACAGAGGTCTAGAATATAATGCATGAGCACT
TGAGATTACTGAGATCTGGATGACTTTTGGGTCATAGATCCTCTGTCTAGGGATTTCATTGAGTTTTTTCACTTGCCACTTCGTAAGAGTTGTTACAGAAGGCATTCCTTCTACTTGAACTGCTCAAG
GATGCTGAATACTTCTCCACCATCCCATTACTAGTTTCTCTGTCTCAGAGTAACTACAAAACGTTTGAGGTCAGCAGAATTGCTCCTGGACCTGTGGGCACTTAATATCATTACCTAGAAAAAACATC
TTTCCCTGTTCGTTTTGTTTTAGGGACCAATCCTAACATGGGTAAGTCTAGTGTCTTTCACCAAATAGACTCCTACTGTTTCATCACACTCACTTTTTAAGGAGACCTATTTAGACTTTTTGCTCTAA
TCAAGCTAATCTGCTTAACTGGACATGACATATTTGCTTCCAAGTCTCTGCCTTTGCACACTCCCTACTCTCCACTGACATTATACTCAAGTCACATTTTTTTTTTCTCCTGACATAGGGACTTCTGA
ACAATTATTGACACAGTACCCCTTGGCTTTCATATGTTTATTCATATGTGTATTTATTTGTATTTATGTTACTTTGTAAATATATTTTATAGTTGCTTTGTGTGTGGAACCTTTCTCCCCATATAGGT
TGTAAGCTCCTTGAGAGCAGGAACCATGTTATCCCTTTATTTTTGTAAACCACTTGCTCCACCATTTCTTCACAGTGCCTAGTGCTACTCATTGCTACTCATGTGATGTTGAATTTGACTGACATACT
TAAAGACTTGGAACAGGTTTATTTTAGGCTGCAAAGGAAACAAAAGGCCTTAGAGTCATCTCTTTGTAATTCTCTCTCAGCCTCTTCCATCTGCTTACTCTAGATTCTATCTTGCTTTTCTTCCTCTC
CTCTCTCTCCTTTCCCTGGCTCTTTGCCTCCATTTCACGCAGCATACAACAAGGTTGCCAGCTACCAAGCAGTCAAATAAGTGGGTACTTCTCTAGCCATTTTCCCTTTCAAGAGCATATAATACTAG
TCAACTTTGCCTTTGCTTTATTCATCATGCAGCCCTCTGGGTCAGTTGCTGTATCATTTTGCCTTGATGCCCCATTCTCTTCTACAGCACTAAGGTCTTGTGAATTTCTCTCTCTCTTTTTTTTGGGG
GGGGAGGTGTTGATTAATTGTTTCATTGTTATTAAATATATGCATGTATCCAAGCTGCTCATATATCATGTGTCATTTCTGATTGTATCCCAAGCATAAGTAGATACTCTCCTTCTAGGGAATTGTAT
CAAAGATATTGGAAGAGGCCTCCTTAAGTTACATTATTTTATACTGTAGTATTAAATGAATGCCCCTAGCAGTAGTAGTAATTGTTAACACTGCACCACAGGAAGCTGGAAGGCATTTGGATTATTGC
TCTGATTGTGGTTTTGTTTTTGAAAAGTCTTACCTCATTCCAAAAAGGATTGAGGCTGTTGAGTTTGGCCTGTTCCCTCACACTGACAACAAAACTAAAGTAAATATAACTTTATAGTTTCTGTATAG
TTTTTCTTTACCAACAAAAAGATCTTTGGTCACTGGGATGTATCAGTGCAATGATCAGAGATAACATCCTATCTAGAGCTGTTGCTTTCAGAGTCATTAAAGGATACCAATTTGA

hide sequence

RefSeq Acc Id:

XM_013978246 ⟹ XP_013833700

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	77,698,932 - 77,717,211 (+)	NCBI

Sequence:

show sequence

TCAGCTGACTGGAAGGAGCGCCGTGGGGCTGTTGTGAGTCAGGCCCGGGAAAGCCGAGCGGACTGAAAGGCTAGCTATCGCCCCCTGGATCTTGGTGGTATTATGGCATGTAGAAGTGTTGGAGGCGC
CGCCGGAGGTGGTATCTGGGTATTACCGTCGCTCCGACTGAAAGAGGATTTCGAGGGAGAGCAATAGAGACGTGATCTGGGCTAGAAGGGACCGGAGGTCCGTAGATTGCGTGGCTAGAGAGGCCGGA
GGTAAGTGGCTGTAGAAGTCGGGCGGACCCGGAATCCAGAGGAAACGGGACCATGACTTATGCTTATCTCTTCAAGTACATCATCATCGGGGACACAGGTGTGGGGAAGTCATGTCTCCTCCTGCAGT
TTACAGACAAGCGGTTCCAGCCGGTCCACGACCTCACAATAGGTGTGGAATTTGGGGCGCGTATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGACACGGCTGGGCAAGAATCCTTC
CGTTCTATCACCCGTTCATACTACAGGGGAGCAGCGGGAGCACTGCTGGTGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCATGGTTAGAGGATGCCCGGCAGCACTCTAGCTCCAA
CATGGTTATCATGCTGATTGGGAATAAGAGTGACCTAGAGTCCCGTAGGGATGTGAAGAGAGAAGAGGGAGAGGCCTTTGCTCGGGAACATGGACTTATATTCATGGAAACTTCGGCCAAAACAGCCT
GCAATGTTGAAGAGGCAAATGGCATCAAGATTGGCCCCCAGCAGTGTATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAGCACTCGTGACATGGGATCTGACTCTGGCTGCTGCTGAACATCT
GGCCTGGACTTTTTTTTCCTTCCTGGAACAGCTTCAAATCAATAGGCTTAAAGAAAGAGGTCTTACTTGCTTTGGCTGAGAAAAGCCTCTTTTCAAGGTGTGATATTTTGCCTTTCCACTTAAAGACC
AGGGGAGAATTTGGGCCCTCATCCTCCTGTTTTAATTTCTAAAGTGTTAGGATCAAAGCTGATTGTCATGGTAGTTCAAAAATAAATTCTTTTATAAGCATACACAATCTACTCCCCACCAAGAATTA
GTAACAGAGGTCTAGAATATAATGCATGAGCACTTGAGATTACTGAGATCTGGATGACTTTTGGGTCATAGATCCTCTGTCTAGGGATTTCATTGAGTTTTTTCACTTGCCACTTCGTAAGAGTTGTT
ACAGAAGGCATTCCTTCTACTTGAACTGCTCAAGGATGCTGAATACTTCTCCACCATCCCATTACTAGTTTCTCTGTCTCAGAGTAACTACAAAACGTTTGAGGTCAGCAGAATTGCTCCTGGACCTG
TGGGCACTTAATATCATTACCTAGAAAAAACATCTTTCCCTGTTCGTTTTGTTTTAGGGACCAATCCTAACATGGGTAAGTCTAGTGTCTTTCACCAAATAGACTCCTACTGTTTCATCACACTCACT
TTTTAAGGAGACCTATTTAGACTTTTTGCTCTAATCAAGCTAATCTGCTTAACTGGACATGACATATTTGCTTCCAAGTCTCTGCCTTTGCACACTCCCTACTCTCCACTGACATTATACTCAAGTCA
CATTTTTTTTTTCTCCTGACATAGGGACTTCTGAACAATTATTGACACAGTACCCCTTGGCTTTCATATGTTTATTCATATGTGTATTTATTTGTATTTATGTTACTTTGTAAATATATTTTATAGTT
GCTTTGTGTGTGGAACCTTTCTCCCCATATAGGTTGTAAGCTCCTTGAGAGCAGGAACCATGTTATCCCTTTATTTTTGTAAACCACTTGCTCCACCATTTCTTCACAGTGCCTAGTGCTACTCATTG
CTACTCATGTGATGTTGAATTTGACTGACATACTTAAAGACTTGGAACAGGTTTATTTTAGGCTGCAAAGGAAACAAAAGGCCTTAGAGTCATCTCTTTGTAATTCTCTCTCAGCCTCTTCCATCTGC
TTACTCTAGATTCTATCTTGCTTTTCTTCCTCTCCTCTCTCTCCTTTCCCTGGCTCTTTGCCTCCATTTCACGCAGCATACAACAAGGTTGCCAGCTACCAAGCAGTCAAATAAGTGGGTACTTCTCT
AGCCATTTTCCCTTTCAAGAGCATATAATACTAGTCAACTTTGCCTTTGCTTTATTCATCATGCAGCCCTCTGGGTCAGTTGCTGTATCATTTTGCCTTGATGCCCCATTCTCTTCTACAGCACTAAG
GTCTTGTGAATTTCTCTCTCTCTTTTTTTTGGGGGGGGAGGTGTTGATTAATTGTTTCATTGTTATTAAATATATGCATGTATCCAAGCTGCTCATATATCATGTGTCATTTCTGATTGTATCCCAAG
CATAAGTAGATACTCTCCTTCTAGGGAATTGTATCAAAGATATTGGAAGAGGCCTCCTTAAGTTACATTATTTTATACTGTAGTATTAAATGAATGCCCCTAGCAGTAGTAGTAATTGTTAACACTGC
ACCACAGGAAGCTGGAAGGCATTTGGATTATTGCTCTGATTGTGGTTTTGTTTTTGAAAAGTCTTACCTCATTCCAAAAAGGATTGAGGCTGTTGAGTTTGGCCTGTTCCCTCACACTGACAACAAAA
CTAAAGTAAATATAACTTTATAGTTTCTGTATAGTTTTTCTTTACCAACAAAAAGATCTTTGGTCACTGGGATGTATCAGTGCAATGATCAGAGATAACATCCTATCTAGAGCTGTTGCTTTCAGAGT
CATTAAAGGATACCAATTTGA

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Protein RefSeqs	XP_013833699	(Get FASTA)	NCBI Sequence Viewer
	XP_013833700	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000024266
	ENSSSCP00000024266.1
	ENSSSCP00000038177
	ENSSSCP00000038177.1
	ENSSSCP00000060638.1
	ENSSSCP00000060945.1
	ENSSSCP00000078717.1
	ENSSSCP00015005418.1
	ENSSSCP00015005441.1
	ENSSSCP00025021166.1
	ENSSSCP00025021182.1
	ENSSSCP00030015390.1
	ENSSSCP00030015397.1
	ENSSSCP00035005381.1
	ENSSSCP00035005391.1
	ENSSSCP00040004691.1
	ENSSSCP00040004709.1
	ENSSSCP00045002897.1
	ENSSSCP00045002928.1
	ENSSSCP00050002554.1
	ENSSSCP00050002557.1
	ENSSSCP00055044846.1
	ENSSSCP00055044948.1
	ENSSSCP00060010734.1
	ENSSSCP00060010743.1
	ENSSSCP00065028987.1
	ENSSSCP00065028992.1
	ENSSSCP00070034403.1
	ENSSSCP00070034410.1

RefSeq Acc Id:	XP_013833699 ⟸ XM_013978245
- Peptide Label:	isoform X1
- UniProtKB:	F1S8J6 (UniProtKB/TrEMBL), A0A4X1UYK3 (UniProtKB/TrEMBL), A0A8W4FHK4 (UniProtKB/TrEMBL), A0A8D0RT92 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRD VKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC hide sequence

RefSeq Acc Id:	XP_013833700 ⟸ XM_013978246
- Peptide Label:	isoform X2
- UniProtKB:	A0A287A2L2 (UniProtKB/TrEMBL), A0A4X1UZR8 (UniProtKB/TrEMBL), A0A8D1DC00 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRD VKREEGEAFAREHGLIFMETSAKTACNVEEANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC hide sequence

Ensembl Acc Id:

ENSSSCP00000024266 ⟸ ENSSSCT00000027841

Ensembl Acc Id:

ENSSSCP00000060945 ⟸ ENSSSCT00000086323

Ensembl Acc Id:

ENSSSCP00000038177 ⟸ ENSSSCT00000048308

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000029544	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015010647	UniProtKB/TrEMBL
	ENSSSCG00025036276	UniProtKB/TrEMBL
	ENSSSCG00030024398	UniProtKB/TrEMBL
	ENSSSCG00035012423	UniProtKB/TrEMBL
	ENSSSCG00040009659	UniProtKB/TrEMBL
	ENSSSCG00045002852	UniProtKB/TrEMBL
	ENSSSCG00050004270	UniProtKB/TrEMBL
	ENSSSCG00055028311	UniProtKB/TrEMBL
	ENSSSCG00060018881	UniProtKB/TrEMBL
	ENSSSCG00065048825	UniProtKB/TrEMBL
	ENSSSCG00070020629	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000027841	ENTREZGENE
	ENSSSCT00000027841.3	UniProtKB/TrEMBL
	ENSSSCT00000048308	ENTREZGENE
	ENSSSCT00000048308.1	UniProtKB/TrEMBL
	ENSSSCT00000086323.2	UniProtKB/TrEMBL
	ENSSSCT00000086920.1	UniProtKB/TrEMBL
	ENSSSCT00000095496.1	UniProtKB/TrEMBL
	ENSSSCT00015013968.1	UniProtKB/TrEMBL
	ENSSSCT00015014035.1	UniProtKB/TrEMBL
	ENSSSCT00025049454.1	UniProtKB/TrEMBL
	ENSSSCT00025049520.1	UniProtKB/TrEMBL
	ENSSSCT00030033974.1	UniProtKB/TrEMBL
	ENSSSCT00030033986.1	UniProtKB/TrEMBL
	ENSSSCT00035015656.1	UniProtKB/TrEMBL
	ENSSSCT00035015673.1	UniProtKB/TrEMBL
	ENSSSCT00040012492.1	UniProtKB/TrEMBL
	ENSSSCT00040012535.1	UniProtKB/TrEMBL
	ENSSSCT00045004502.1	UniProtKB/TrEMBL
	ENSSSCT00045004534.1	UniProtKB/TrEMBL
	ENSSSCT00050005887.1	UniProtKB/TrEMBL
	ENSSSCT00050005891.1	UniProtKB/TrEMBL
	ENSSSCT00055056140.1	UniProtKB/TrEMBL
	ENSSSCT00055056256.1	UniProtKB/TrEMBL
	ENSSSCT00060025395.1	UniProtKB/TrEMBL
	ENSSSCT00060025407.1	UniProtKB/TrEMBL
	ENSSSCT00065066812.1	UniProtKB/TrEMBL
	ENSSSCT00065066826.1	UniProtKB/TrEMBL
	ENSSSCT00070040996.1	UniProtKB/TrEMBL
	ENSSSCT00070041003.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Rab_GTPases_membrane_traffic	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
KEGG Report	ssc:100516623	UniProtKB/TrEMBL
NCBI Gene	RAB2B	ENTREZGENE
PANTHER	DRAB11-RELATED	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A287A2L2	ENTREZGENE
	A0A4X1UYK3	ENTREZGENE
	A0A4X1UZR8	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2Q9L1_PIG	UniProtKB/TrEMBL
	A0A8D0RT92	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CLT2_PIG	UniProtKB/TrEMBL
	A0A8D1DC00	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FHK4	ENTREZGENE, UniProtKB/TrEMBL
	F1S8J6	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A287A2L2	UniProtKB/TrEMBL
	A0A4X1UYK3	UniProtKB/TrEMBL
	A0A5G2QFY1	UniProtKB/TrEMBL
VGNC ID	VGNC:98253	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar