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Gene: FMOD (fibromodulin) Sus scrofa

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Symbol:

FMOD

Name:

fibromodulin

RGD ID:

14011019

Description:

INVOLVED IN skin development (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); familial adult myoclonic epilepsy 5 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN collagen-containing extracellular matrix (ortholog); extracellular region (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FMOD (fibromodulin)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Fmod (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Fmod (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fmod (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FMOD (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FMOD (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fmod (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FMOD (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fmod (fibromodulin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	64,063,001 - 64,073,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	64,062,995 - 64,073,853 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	70,356,603 - 70,367,308 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Diabetic Nephropathies (ISO)

familial adult myoclonic epilepsy 5 (ISO)

gastrointestinal stromal tumor (ISO)

gingivitis (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

parathyroid carcinoma (ISO)

periodontitis (ISO)

tendinitis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

collagen fibril organization (IEA)

skin development (ISO)

Cellular Component

collagen-containing extracellular matrix (ISO)

extracellular region (IEA,ISO)

extracellular space (IBA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

FMOD
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	64,063,001 - 64,073,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	64,062,995 - 64,073,853 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	70,356,603 - 70,367,308 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FMOD
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	203,340,628 - 203,351,122 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	203,340,628 - 203,351,758 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	203,309,756 - 203,320,250 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	201,576,375 - 201,586,912 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	200,041,413 - 200,049,060	NCBI
Celera	1	176,439,022 - 176,449,562 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
HuRef	1	174,474,902 - 174,485,714 (-)	NCBI		HuRef
CHM1_1	1	204,732,638 - 204,743,449 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	202,603,493 - 202,613,991 (-)	NCBI		T2T-CHM13v2.0

Fmod
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	133,964,992 - 133,976,018 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	133,964,992 - 133,976,015 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	134,037,254 - 134,048,280 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	134,037,254 - 134,048,277 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	135,934,092 - 135,944,854 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	135,853,926 - 135,864,688 (+)	NCBI		MGSCv36	mm8
Celera	1	136,653,909 - 136,670,078 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	58.09	NCBI

Fmod
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	48,045,567 - 48,056,184 (+)	NCBI		GRCr8
mRatBN7.2	13	45,493,517 - 45,504,134 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	45,493,517 - 45,504,133 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	48,101,962 - 48,112,556 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	49,390,009 - 49,400,605 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	46,654,575 - 46,665,165 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	50,874,886 - 50,885,503 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	50,873,605 - 50,885,563 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	55,927,583 - 55,939,041 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	46,987,714 - 46,998,331 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	47,001,756 - 47,012,373 (+)	NCBI
Celera	13	45,822,144 - 45,832,470 (+)	NCBI		Celera
RH 3.4 Map	13	184.4	RGD
Cytogenetic Map	13	q13	NCBI

Fmod
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	39,328,743 - 39,340,258 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	39,328,743 - 39,340,113 (-)	NCBI	ChiLan1.0	ChiLan1.0

FMOD
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	46,026,552 - 46,037,305 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	45,993,588 - 46,004,297 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	178,942,472 - 178,953,158 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	183,236,412 - 183,247,057 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	183,238,130 - 183,244,074 (-)	Ensembl	panpan1.1		panPan2

FMOD
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	102,106 - 112,267 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	103,230 - 112,154 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	192,095 - 202,277 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	98,889 - 109,072 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	98,893 - 108,988 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	91,412 - 101,593 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	485,490 - 495,671 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	699,365 - 709,547 (-)	NCBI		UU_Cfam_GSD_1.0

Fmod
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	72,036,724 - 72,047,975 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936567	1,271,252 - 1,282,841 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936567	1,271,401 - 1,282,651 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FMOD
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	25,992,006 - 26,002,909 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	25,992,228 - 26,003,109 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	26,768,097 - 26,779,048 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fmod
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	7,507,449 - 7,518,636 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	7,507,670 - 7,518,076 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in FMOD
216 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	5	14	12	23	3	6	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003130105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF159383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU657939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01000867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000016639 ⟹ ENSSSCP00000016193

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	64,063,001 - 64,073,858 (-)	Ensembl

RefSeq Acc Id:

XM_003130105 ⟹ XP_003130153

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	64,062,995 - 64,073,853 (-)	NCBI

Sequence:

show sequence

CTGTACAAATAACTTCTAGGGCGCCACTAACTCGTTCAACAGAAAGAGACCCAGAGCTGCCAAT
GCTTTAGGGAAGATAAGTGAGTGGAAAGAAGGTGGTTTTTACAGCGTCAGGCCGTCAGAAGTCA
GAAGGATTTTGCGCGGTTGAGTGTGAGCTCCGCCCCTGCAGCAGAGCTGAAGAAGCCAGGATCC
GGGCTCCTCAACCCCTCTCTTCACAATATTTGATTAGGAATTTGGGGGCGGGCCCTGGTCTGGC
ACAGACCCGCACACTCTCAGTAGACGCTCACTCCTCTCCCTCTCACACGCTCTCCAACCAAGGA
GGCCAGACAGAGGGACCTGATCACTCTCTGAAAGGTTCAACTCGAGACATACAAGATGCAGTGG
GCCTCTCTCCTGCTGCTGGCAGGGCTCTGCTCCCTCTCCTGGGCCCAGTATGAAGATGACTCCC
ACTGGTGGTTCCACTACCTCCGCAACCAGCAGTCCACCTACTACGATCACTATGACCCTTACCC
TTATGAGCCCTATGAGCCTTACCCCTACGGGGTTGAGGAAGGTCCAGCTTATGCCTACGGCTCT
CCACCACCACCTGAACCCCGTGATTGCCCCCAGGAGTGCGACTGCCCCCCCAATTTCCCCACAG
CCATGTACTGTGACAACCGCAACCTCAAGTACCTGCCTTTTGTCCCCTCCCGCATGAAATATGT
CTACTTCCAGAACAACCAGATCTCTTCCATCCAAGAGGGCGTCTTCGACAATGCCACTGGGCTG
CTCTGGATTGCTCTCCATGGCAACCAGATCACCAGTGATAAGGTGGGCAAGAAGGTCTTCTCCA
AGCTGAGGCACCTGGAGAGGCTGTACCTGGACCACAACAACCTGACCCGGATGCCTGGCCCACT
GCCTCGATCCCTGAGAGAGCTCCATCTTGACCACAACCAGATCTCAAGGGTCCCCAACAATGCG
CTGGAGGGGCTGGAGAACCTCACAGCCTTGTACCTCCAACACAACGAGATCCAGGAAGTAGGCA
GTTCAATGAGAGGCCTCCGGTCACTGATCTTGCTGGACCTGAGTTACAATCACCTTCGGAAGGT
GCCTGATGGACTGCCCTCGGCCCTTGAGCAGTTGTACCTAGAGCACAACAACGTCTACTCGGTC
CCCGACAGCTACTTCCGGGGGTCGCCCAAGCTGCTATATGTGCGGCTGTCCCACAACAGTCTCA
CCAACAATGGCCTGGCCTCCAACACTTTCAATTCCAGCAGCCTCCTTGAGCTCGACCTCTCCTA
CAACCAGCTGCAGAAGATCCCCCCAGTCAACACCAACCTGGAGAACCTCTACCTCCAAGGCAAT
AGGATCAATGAGTTCTCCATTAGCAGTTTCTGCACCGTGGTGGACGTCATGAACTTCTCCAAGC
TGCAGGTGCTGCGCCTGGATGGGAACGAGATCAAGCGCAGCGCCATGCCCGCCGATGCGCCCCT
CTGCCTGCGCCTCGCCAGCCTCATCGAGATCTGAGCGGCCCACACACTGGGCGCAGGGTCGGAG
CCCCGGGGCCCCTCTGCATTTGGCTTGATGGTTTGGTTTGGCTTTTGCTGGAAGGTCTGGGACA
GATCATGTGACAGAAGTCCATGGGCTCCCTCTATAGTCTTCTTCCCTGTAGGCAGGTTTAGGTG
GAATCTGGGGACAGGCAGCCTTCTTCTGCTGAGGGAAATGAAACTCTCTTTTCCAGGACAGAAA
TGGTGGCAGAGGGAGTAATCTTTGAAGTCCCAAACCCAGAAATCTCATTACCCTCAAGTTCCTC
ACGATGATGTGGTGCCATGAACCTTAAAAGTTCATGGGCATAACCGTACTTTATAAACAATCAC
TGACTATGTGAGCAGCGCTTGACAGCTCTCCCACATGCAGGGCTAGTGGTGCAGTTACTCTTGG
CTCCCACTCACTGCTCCTCAGAATATACCTCTTGCCTAAATGCCTCCTCCTAAGTCCACTTCAT
CCCCCCCAGTCTTGCTCTATAGACACCTTTTCTATGGCTTAGGCAGAGGCAGGAGACCCCAAGG
CACATCTGCATCTGCCCAGCGCCTGTCCAGAGAAGTCATGCTTGTGTCTGAGGTTGGAAGGACA
CCAAGAGTCACCTCTACCTTCCAAACCTCACTCTTCGAAAGCCACCGTATTAGAGATCACCAAT
ATGATGACAACATTCCTGGCTTGTTGTGGAACCGATCTCAGGCTTAGCTAAATGTGTGGGACTG
TGTTTTAGCAGCTGGGCAGCTCTTTGAAGGTGAATCAGACTTCAAAAGAGGAAAGGCCAGACTC
TGTTTATCATCAGCATCCGTAATGGGAATAAACACACCTGGAATTGGCTGAACTGAGAAGCAGC
CCCAGTAGTTTCTTTGTTGTCCAGCACTCTCTACATTCCCAGCAGCTCCCTACCTGGGCCTTCA
TCCTCAAAGGCAGGAGGAAGGTCATTTGTCCTCTCCTCTTATGCAAGCAGAAAGATCTATATCC
TGATGGTAGAGGCAGACTCCAACCAGCCCTGGACTTGCCTGCTAGCCCAAAGGAAGAGGCTGTG
GTATTAATGGTTTTGCTATCTGTATTAATTGTTTTGTTCTAAAACCACAGTTAATAGGACCAGC
TCTGGCTGAAAATGCTCACTGGGTCTGTGAAGCCCAGGCCAGGCAGCCAAATTTTGCCTGTGCT
GAGCAGAAAACCCTCTGCTTTCACACCTCTGAGCTATACCCTCATTACGGAAGATGGCTGTTGC
TTTATAGCTTGGCAGGAGAACAATGAATTCTTACCATTTCTGAAAGTAATGTTACCTAGGAAGC
CCCTATCTTTGAGGTCCCATTGGGATGGAGCCATCTGGGCAGCCAGGAGCAGGGACTGCTGGAG
GGAGGCTAGCCCTGGTCTGGTCCCTGCCCAGATGCCACTGCATCCCTGATACAGTGTCTTCTTT
GAAGTGGTTTCCCTAAAGAGGGAAGGGGGGATCCTTGGACTGTGTTCCTAGCTCTGGACCCTGA
AATCCACAAAAGCCAAACCAGCTCATTTCAACAAAGGAGCTCTGCTGTGAGGGGCAAGGCTGCC
CCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATGCCTCTATAAAGGATCCTTACTA
CAGGAAAAGCATGAGTGGTGGCTAACCTGCCCAATAAAGTTATTTTATGTTTGCATCTGCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003130153	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF19154	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000016193
	ENSSSCP00000016193.3
	ENSSSCP00015012197.1
	ENSSSCP00025005102.1
	ENSSSCP00030028010.1
	ENSSSCP00035031270.1
	ENSSSCP00040013619.1
	ENSSSCP00045040284.1
	ENSSSCP00050035322.1
	ENSSSCP00055036701.1
	ENSSSCP00060035430.1
	ENSSSCP00065038663.1
	ENSSSCP00070036419.1
GenBank Protein	Q9TTB4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_003130153 ⟸ XM_003130105

- UniProtKB:

A0A4X1V4X8 (UniProtKB/TrEMBL), A0A480MI09 (UniProtKB/TrEMBL), A0A8D1W6S0 (UniProtKB/TrEMBL), F1S6B5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQWASLLLLAGLCSLSWAQYEDDSHWWFHYLRNQQSTYYDHYDPYPYEPYEPYPYGVEEGPAYA
YGSPPPPEPRDCPQECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSIQEGVFDNA
TGLLWIALHGNQITSDKVGKKVFSKLRHLERLYLDHNNLTRMPGPLPRSLRELHLDHNQISRVP
NNALEGLENLTALYLQHNEIQEVGSSMRGLRSLILLDLSYNHLRKVPDGLPSALEQLYLEHNNV
YSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVNTNLENLYL
QGNRINEFSISSFCTVVDVMNFSKLQVLRLDGNEIKRSAMPADAPLCLRLASLIEI

hide sequence

Ensembl Acc Id:

ENSSSCP00000016193 ⟸ ENSSSCT00000016639

Protein Domains

LRRNT

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000015270	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015023210	UniProtKB/TrEMBL
	ENSSSCG00025009857	UniProtKB/TrEMBL
	ENSSSCG00030043918	UniProtKB/TrEMBL
	ENSSSCG00035057223	UniProtKB/TrEMBL
	ENSSSCG00040024671	UniProtKB/TrEMBL
	ENSSSCG00045033656	UniProtKB/TrEMBL
	ENSSSCG00050060374	UniProtKB/TrEMBL
	ENSSSCG00055023386	UniProtKB/TrEMBL
	ENSSSCG00060059951	UniProtKB/TrEMBL
	ENSSSCG00065064423	UniProtKB/TrEMBL
	ENSSSCG00070021784	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000016639	ENTREZGENE
	ENSSSCT00000016639.5	UniProtKB/TrEMBL
	ENSSSCT00015030818.1	UniProtKB/TrEMBL
	ENSSSCT00025012990.1	UniProtKB/TrEMBL
	ENSSSCT00030061241.1	UniProtKB/TrEMBL
	ENSSSCT00035076527.1	UniProtKB/TrEMBL
	ENSSSCT00040032964.1	UniProtKB/TrEMBL
	ENSSSCT00045057593.1	UniProtKB/TrEMBL
	ENSSSCT00050082265.1	UniProtKB/TrEMBL
	ENSSSCT00055046027.1	UniProtKB/TrEMBL
	ENSSSCT00060081795.1	UniProtKB/TrEMBL
	ENSSSCT00065088414.1	UniProtKB/TrEMBL
	ENSSSCT00070043281.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LRR_5	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
	SLRP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:100526237	UniProtKB/TrEMBL
NCBI Gene	FMOD	ENTREZGENE
PANTHER	AGAP008170-PA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR45712:SF4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	LRR_5	UniProtKB/TrEMBL
	LRR_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	LRR_BAC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LRR_SD22	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A480MI09	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1V4X8	ENTREZGENE
	A0A8D1W6S0	ENTREZGENE, UniProtKB/TrEMBL
	F1S6B5	ENTREZGENE, UniProtKB/TrEMBL
	FMOD_PIG	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	A0A4X1V4X8	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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Imported Disease Annotations - ClinVar